RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 BDNFP23560 247 aa14.73□□□□□ -0.05
PRPF39-204ENST00000553605 ANXA13P27216 316 aa14.73□□□□□ -0.05
PRPF39-204ENST00000553605 POLR2BP30876 1174 aaKnown RBP14.73□□□□□ -0.05
PRPF39-204ENST00000553605 SLC12A3P55017 1021 aa14.73□□□□□ -0.05
PRPF39-204ENST00000553605 ADALQ6DHV7 355 aa14.73□□□□□ -0.05
PRPF39-204ENST00000553605 GRAMD4Q6IC98 578 aa14.73□□□□□ -0.05
PRPF39-204ENST00000553605 TMEM25Q86YD3 366 aa14.73□□□□□ -0.05
PRPF39-204ENST00000553605 NT5DC4Q86YG4 428 aa14.73□□□□□ -0.05
PRPF39-204ENST00000553605 FAM181AQ8N9Y4 354 aa14.73□□□□□ -0.05
PRPF39-204ENST00000553605 GTF3C6Q969F1 213 aa14.73□□□□□ -0.05
PRPF39-204ENST00000553605 ITM2CQ9NQX7 267 aa14.73□□□□□ -0.05
PRPF39-204ENST00000553605 SPHK2Q9NRA0 654 aa14.73□□□□□ -0.05
PRPF39-204ENST00000553605 GMIPQ9P107 970 aa14.73□□□□□ -0.05
PRPF39-204ENST00000553605 EIF2B4Q9UI10 523 aaKnown RBP14.73□□□□□ -0.05
PRPF39-204ENST00000553605 AGAP1Q9UPQ3 857 aa14.73□□□□□ -0.05
PRPF39-204ENST00000553605 MGAQ8IWI9 3026 aa14.73□□□□□ -0.05
PRPF39-204ENST00000553605 KNTC1P50748 2209 aa14.72□□□□□ -0.05
PRPF39-204ENST00000553605 ANKRD63C9JTQ0 380 aa14.72□□□□□ -0.05
PRPF39-204ENST00000553605 K7ENM7 598 aa14.72□□□□□ -0.05
PRPF39-204ENST00000553605 ITGB3P05106 788 aa14.72□□□□□ -0.05
PRPF39-204ENST00000553605 HNF1BP35680 557 aa14.72□□□□□ -0.05
PRPF39-204ENST00000553605 CSNK1EP49674 416 aaKnown RBP14.72□□□□□ -0.05
PRPF39-204ENST00000553605 CXADRP78310 365 aa14.72□□□□□ -0.05
PRPF39-204ENST00000553605 NOP14P78316 857 aaKnown RBP14.72□□□□□ -0.05
PRPF39-204ENST00000553605 POU5F1Q01860 360 aaKnown RBP14.72□□□□□ -0.05
PRPF39-204ENST00000553605 TAF10Q12962 218 aa14.72□□□□□ -0.05
PRPF39-204ENST00000553605 ANKRD1Q15327 319 aa14.72□□□□□ -0.05
PRPF39-204ENST00000553605 SF3A1Q15459 793 aaKnown RBP14.72□□□□□ -0.05
PRPF39-204ENST00000553605 ME3Q16798 604 aa14.72□□□□□ -0.05
PRPF39-204ENST00000553605 ADGRF2Q8IZF7 708 aa14.72□□□□□ -0.05
PRPF39-204ENST00000553605 C1orf216Q8TAB5 229 aa14.72□□□□□ -0.05
PRPF39-204ENST00000553605 SNIP1Q8TAD8 396 aaKnown RBP14.72□□□□□ -0.05
PRPF39-204ENST00000553605 SCFD1Q8WVM8 642 aa14.72□□□□□ -0.05
PRPF39-204ENST00000553605 FOXP1Q9H334 677 aaPredicted RBP14.72□□□□□ -0.05
PRPF39-204ENST00000553605 DNAJC17Q9NVM6 304 aaKnown RBP14.72□□□□□ -0.05
PRPF39-204ENST00000553605 GDAP2Q9NXN4 497 aa14.72□□□□□ -0.05
PRPF39-204ENST00000553605 USP36Q9P275 1121 aaKnown RBP14.72□□□□□ -0.05
PRPF39-204ENST00000553605 AGO2Q9UKV8 859 aaKnown RBP14.72□□□□□ -0.05
PRPF39-204ENST00000553605 SH3BP1Q9Y3L3 701 aa14.72□□□□□ -0.05
PRPF39-204ENST00000553605 SNX9Q9Y5X1 595 aa14.72□□□□□ -0.05
PRPF39-204ENST00000553605 KCNJ18B7U540 433 aa14.71□□□□□ -0.05
PRPF39-204ENST00000553605 B8ZZF3 427 aa14.71□□□□□ -0.05
PRPF39-204ENST00000553605 WASH3PC4AMC7 463 aa14.71□□□□□ -0.05
PRPF39-204ENST00000553605 PRRT4C9JH25 899 aa14.71□□□□□ -0.05
PRPF39-204ENST00000553605 TULP1O00294 542 aaPredicted RBP14.71□□□□□ -0.05
PRPF39-204ENST00000553605 GFRA2O00451 464 aa14.71□□□□□ -0.05
PRPF39-204ENST00000553605 PLA2G4BP0C869 781 aa14.71□□□□□ -0.05
PRPF39-204ENST00000553605 OXTRP30559 389 aa14.71□□□□□ -0.05
PRPF39-204ENST00000553605 TRAPPC10P48553 1259 aa14.71□□□□□ -0.05
PRPF39-204ENST00000553605 TFAMQ00059 246 aaKnown RBP14.71□□□□□ -0.05
PRPF39-204ENST00000553605 RTP5Q14D33 572 aa14.71□□□□□ -0.05
PRPF39-204ENST00000553605 IL17AQ16552 155 aa14.71□□□□□ -0.05
PRPF39-204ENST00000553605 KIF19Q2TAC6 998 aa14.71□□□□□ -0.05
PRPF39-204ENST00000553605 ARSHQ5FYA8 562 aa14.71□□□□□ -0.05
PRPF39-204ENST00000553605 TDRD10Q5VZ19 366 aaKnown RBP14.71□□□□□ -0.05
PRPF39-204ENST00000553605 SLFN12LQ6IEE8 588 aa14.71□□□□□ -0.05
PRPF39-204ENST00000553605 BBS7Q8IWZ6 715 aa14.71□□□□□ -0.05
PRPF39-204ENST00000553605 MYCT1Q8N699 235 aa14.71□□□□□ -0.05
PRPF39-204ENST00000553605 TOP6BLQ8N6T0 577 aa14.71□□□□□ -0.05
PRPF39-204ENST00000553605 FGF11Q92914 225 aa14.71□□□□□ -0.05
PRPF39-204ENST00000553605 MYLPFQ96A32 169 aa14.71□□□□□ -0.05
PRPF39-204ENST00000553605 WBP1Q96G27 269 aa14.71□□□□□ -0.05
PRPF39-204ENST00000553605 FTSJ1Q9UET6 329 aa14.71□□□□□ -0.05
PRPF39-204ENST00000553605 SNX11Q9Y5W9 270 aa14.71□□□□□ -0.05
PRPF39-204ENST00000553605 TISP43B9A030 160 aa14.7□□□□□ -0.06
PRPF39-204ENST00000553605 KCNK3O14649 394 aa14.7□□□□□ -0.06
PRPF39-204ENST00000553605 TRIM66O15016 1216 aa14.7□□□□□ -0.06
PRPF39-204ENST00000553605 PCDHGA12O60330 932 aa14.7□□□□□ -0.06
PRPF39-204ENST00000553605 IL18RAPO95256 599 aa14.7□□□□□ -0.06
PRPF39-204ENST00000553605 WISP1O95388 367 aa14.7□□□□□ -0.06
PRPF39-204ENST00000553605 PLCG1P19174 1290 aa14.7□□□□□ -0.06
PRPF39-204ENST00000553605 TPMTP51580 245 aa14.7□□□□□ -0.06
PRPF39-204ENST00000553605 AFF3P51826 1226 aaKnown RBP14.7□□□□□ -0.06
PRPF39-204ENST00000553605 PSMC1P62191 440 aaKnown RBP14.7□□□□□ -0.06
PRPF39-204ENST00000553605 CYP27A1Q02318 531 aa14.7□□□□□ -0.06
PRPF39-204ENST00000553605 TLE3Q04726 772 aa14.7□□□□□ -0.06
PRPF39-204ENST00000553605 TARDBPQ13148 414 aaKnown RBP eCLIP14.7□□□□□ -0.06
PRPF39-204ENST00000553605 MAPRE1Q15691 268 aaKnown RBP14.7□□□□□ -0.06
PRPF39-204ENST00000553605 SOWAHAQ2M3V2 549 aa14.7□□□□□ -0.06
PRPF39-204ENST00000553605 FUT11Q495W5 492 aa14.7□□□□□ -0.06
PRPF39-204ENST00000553605 HYIQ5T013 277 aa14.7□□□□□ -0.06
PRPF39-204ENST00000553605 CRELD2Q6UXH1 353 aaPredicted RBP14.7□□□□□ -0.06
PRPF39-204ENST00000553605 DTHD1Q6ZMT9 781 aa14.7□□□□□ -0.06
PRPF39-204ENST00000553605 KCTD17Q8N5Z5 321 aa14.7□□□□□ -0.06
PRPF39-204ENST00000553605 CSGALNACT2Q8N6G5 542 aa14.7□□□□□ -0.06
PRPF39-204ENST00000553605 LRRC52Q8N7C0 313 aa14.7□□□□□ -0.06
PRPF39-204ENST00000553605 C1orf127Q8N9H9 656 aa14.7□□□□□ -0.06
PRPF39-204ENST00000553605 ZFRQ96KR1 1074 aaKnown RBP14.7□□□□□ -0.06
PRPF39-204ENST00000553605 SLITRK1Q96PX8 696 aa14.7□□□□□ -0.06
PRPF39-204ENST00000553605 XPO6Q96QU8 1125 aaKnown RBP14.7□□□□□ -0.06
PRPF39-204ENST00000553605 PLIN2Q99541 437 aa14.7□□□□□ -0.06
PRPF39-204ENST00000553605 ARID3AQ99856 593 aa14.7□□□□□ -0.06
PRPF39-204ENST00000553605 SYT15Q9BQS2 421 aa14.7□□□□□ -0.06
PRPF39-204ENST00000553605 NRSN2Q9GZP1 204 aa14.7□□□□□ -0.06
PRPF39-204ENST00000553605 CDH9Q9ULB4 789 aa14.7□□□□□ -0.06
PRPF39-204ENST00000553605 ODF2LQ9ULJ1 636 aa14.7□□□□□ -0.06
PRPF39-204ENST00000553605 NOL7Q9UMY1 257 aaKnown RBP14.7□□□□□ -0.06
PRPF39-204ENST00000553605 PCDHGA1Q9Y5H4 931 aa14.7□□□□□ -0.06
PRPF39-204ENST00000553605 SPTA1P02549 2419 aa14.7□□□□□ -0.06
PRPF39-204ENST00000553605 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms