RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 PGM5Q15124 567 aa5.29□□□□□ -1.56
ATXN3-220ENST00000553491 PPP2R5BQ15173 497 aa5.29□□□□□ -1.56
ATXN3-220ENST00000553491 TMEM240Q5SV17 173 aa5.29□□□□□ -1.56
ATXN3-220ENST00000553491 KANK2Q63ZY3 851 aa5.29□□□□□ -1.56
ATXN3-220ENST00000553491 TAPT1Q6NXT6 567 aa5.29□□□□□ -1.56
ATXN3-220ENST00000553491 WDR75Q8IWA0 830 aaKnown RBP5.29□□□□□ -1.56
ATXN3-220ENST00000553491 REXO1L1PQ8IX06 675 aa5.29□□□□□ -1.56
ATXN3-220ENST00000553491 CMTR2Q8IYT2 770 aaKnown RBP5.29□□□□□ -1.56
ATXN3-220ENST00000553491 TTC9BQ8N6N2 239 aa5.29□□□□□ -1.56
ATXN3-220ENST00000553491 PCSK9Q8NBP7 692 aaKnown RBP5.29□□□□□ -1.56
ATXN3-220ENST00000553491 ZNF274Q96GC6 653 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-220ENST00000553491 PGBD1Q96JS3 809 aa5.29□□□□□ -1.56
ATXN3-220ENST00000553491 TEKT5Q96M29 485 aa5.29□□□□□ -1.56
ATXN3-220ENST00000553491 IWS1Q96ST2 819 aa5.29□□□□□ -1.56
ATXN3-220ENST00000553491 C1QTNF3Q9BXJ4 246 aa5.29□□□□□ -1.56
ATXN3-220ENST00000553491 KCTD10Q9H3F6 313 aa5.29□□□□□ -1.56
ATXN3-220ENST00000553491 MLXIPQ9HAP2 919 aa5.29□□□□□ -1.56
ATXN3-220ENST00000553491 C6orf50Q9HD87 102 aa5.29□□□□□ -1.56
ATXN3-220ENST00000553491 PXMP2Q9NR77 195 aa5.29□□□□□ -1.56
ATXN3-220ENST00000553491 OGDHLQ9ULD0 1010 aa5.29□□□□□ -1.56
ATXN3-220ENST00000553491 TPCN1Q9ULQ1 816 aa5.29□□□□□ -1.56
ATXN3-220ENST00000553491 ZMYND8Q9ULU4 1186 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-220ENST00000553491 PCDHA6Q9UN73 950 aa5.29□□□□□ -1.56
ATXN3-220ENST00000553491 GPR45Q9Y5Y3 372 aa5.29□□□□□ -1.56
ATXN3-220ENST00000553491 TCHHQ07283 1943 aa5.29□□□□□ -1.56
ATXN3-220ENST00000553491 SYNRGQ9UMZ2 1314 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 CEP290O15078 2479 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 MYADML2A6NDP7 307 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 H0YGN5 161 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 DNM1LO00429 736 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 PQBP1O60828 265 aaKnown RBP5.28□□□□□ -1.56
ATXN3-220ENST00000553491 CDKL5O76039 1030 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 ZRANB2O95218 330 aaKnown RBP eCLIP5.28□□□□□ -1.56
ATXN3-220ENST00000553491 GH1P01241 217 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 ASGR1P07306 291 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 SCG2P13521 617 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 OSMP13725 252 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 CAPN2P17655 700 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 XBP1P17861 261 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 HSD17B4P51659 736 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 ACLYP53396 1101 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 LGALS4P56470 323 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 BCAR1P56945 870 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 PSMC6P62333 389 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 ADAM17P78536 824 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 CD83Q01151 205 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 TRIM29Q14134 588 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 PFKFB3Q16875 520 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-220ENST00000553491 FAM102BQ5T8I3 360 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 UTP14CQ5TAP6 766 aaKnown RBP5.28□□□□□ -1.56
ATXN3-220ENST00000553491 CCDC181Q5TID7 509 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 CXCL17Q6UXB2 119 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 SLC39A5Q6ZMH5 540 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 TRMT1LQ7Z2T5 733 aaKnown RBP5.28□□□□□ -1.56
ATXN3-220ENST00000553491 C14orf80Q86SX3 495 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 TLK2Q86UE8 772 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 GGNQ86UU5 652 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 CCDC83Q8IWF9 413 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 TPH2Q8IWU9 490 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 MYO1HQ8N1T3 1032 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 SCFD2Q8WU76 684 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 CCDC12Q8WUD4 166 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-220ENST00000553491 RAX2Q96IS3 184 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 C8orf48Q96LL4 319 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 GLT1D1Q96MS3 346 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 SLC2A13Q96QE2 648 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 LBHD1Q9BQE6 289 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-220ENST00000553491 PITHD1Q9GZP4 211 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-220ENST00000553491 MTG2Q9H4K7 406 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 CD248Q9HCU0 757 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 STARD7Q9NQZ5 370 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 MAP3K20Q9NYL2 800 aaKnown RBP5.28□□□□□ -1.56
ATXN3-220ENST00000553491 VPS54Q9P1Q0 977 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 DPP7Q9UHL4 492 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 NRBP1Q9UHY1 535 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 PRSS50Q9UI38 385 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 LIMCH1Q9UPQ0 1083 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 ANKRD6Q9Y2G4 727 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 SLC4A7Q9Y6M7 1214 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 CENPFP49454 3210 aa5.28□□□□□ -1.56
ATXN3-220ENST00000553491 ASTN1O14525 1302 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 A0A0A6YYJ9 748 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 DDX39AO00148 427 aaKnown RBP5.27□□□□□ -1.57
ATXN3-220ENST00000553491 MEIS2O14770 477 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 ADCY6O43306 1168 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 PFKFB2O60825 505 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 OPHN1O60890 802 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 DEXIO95424 95 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 GGPS1O95749 300 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 ZNF888P0CJ79 500 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-220ENST00000553491 PF4V1P10720 104 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 IFNAR1P17181 557 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 C5AR1P21730 350 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 GNA11P29992 359 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 CPT1AP50416 773 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 GUCY1B3Q02153 619 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 ME3Q16798 604 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 LRRC26Q2I0M4 334 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 MUM1Q2TAK8 710 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 DUSP28Q4G0W2 176 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms