RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 SYT13Q7L8C5 426 aa7.87□□□□□ -1.15
ATXN3-219ENST00000553488 USP37Q86T82 979 aa7.87□□□□□ -1.15
ATXN3-219ENST00000553488 RPLP0P6Q8NHW5 317 aa7.87□□□□□ -1.15
ATXN3-219ENST00000553488 SNX29Q8TEQ0 813 aa7.87□□□□□ -1.15
ATXN3-219ENST00000553488 KCNN1Q92952 543 aa7.87□□□□□ -1.15
ATXN3-219ENST00000553488 SENP8Q96LD8 212 aa7.87□□□□□ -1.15
ATXN3-219ENST00000553488 SEPT5Q99719 369 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-219ENST00000553488 NTPCRQ9BSD7 190 aaKnown RBP7.87□□□□□ -1.15
ATXN3-219ENST00000553488 MMTAG2Q9BU76 263 aaKnown RBP7.87□□□□□ -1.15
ATXN3-219ENST00000553488 SCNM1Q9BWG6 230 aa7.87□□□□□ -1.15
ATXN3-219ENST00000553488 ZCWPW1Q9H0M4 648 aa7.87□□□□□ -1.15
ATXN3-219ENST00000553488 RBSNQ9H1K0 784 aa7.87□□□□□ -1.15
ATXN3-219ENST00000553488 KIF9Q9HAQ2 790 aa7.87□□□□□ -1.15
ATXN3-219ENST00000553488 PLEKHA5Q9HAU0 1116 aa7.87□□□□□ -1.15
ATXN3-219ENST00000553488 THG1LQ9NWX6 298 aaKnown RBP7.87□□□□□ -1.15
ATXN3-219ENST00000553488 LRWD1Q9UFC0 647 aa7.87□□□□□ -1.15
ATXN3-219ENST00000553488 ZMYM5Q9UJ78 669 aa7.87□□□□□ -1.15
ATXN3-219ENST00000553488 PTPRBP23467 1997 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 PP2D1A8MPX8 630 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 LACTBL1A8MY62 500 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 PATE3B3GLJ2 98 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 RHOBTB1O94844 696 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 APBB3O95704 486 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 ABL1P00519 1130 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 HAPLN1P10915 354 aaPredicted RBP7.86□□□□□ -1.15
ATXN3-219ENST00000553488 ODC1P11926 461 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 CEACAM1P13688 526 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 PLS3P13797 630 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 PCSK2P16519 638 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 BCKDHBP21953 392 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 GJA4P35212 333 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 GALK1P51570 392 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 CDR1P51861 262 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 NCKAP1LP55160 1127 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 NLRP12P59046 1061 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 ANAPC15P60006 121 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 PPP2R3AQ06190 1150 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 TRIM29Q14134 588 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 DMC1Q14565 340 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 ZNF268Q14587 947 aaPredicted RBP7.86□□□□□ -1.15
ATXN3-219ENST00000553488 VEPH1Q14D04 833 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 PTPAQ15257 358 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 ANKRD1Q15327 319 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 ZNF77Q15935 545 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 MGAT5BQ3V5L5 792 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 FBXO43Q4G163 708 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 DAB2IPQ5VWQ8 1189 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 SPATA1Q5VX52 437 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 DSTYKQ6XUX3 929 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 LRRTM3Q86VH5 581 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 RASSF3Q86WH2 238 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 STKLD1Q8NE28 680 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 ZCCHC14Q8WYQ9 949 aaKnown RBP7.86□□□□□ -1.15
ATXN3-219ENST00000553488 GCNAQ96QF7 691 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 P2RY13Q9BPV8 354 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 TIPINQ9BVW5 301 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 RASSF4Q9H2L5 321 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 FOXP1Q9H334 677 aaPredicted RBP7.86□□□□□ -1.15
ATXN3-219ENST00000553488 TMEM9BQ9NQ34 198 aa7.86□□□□□ -1.15
ATXN3-219ENST00000553488 ANO9A1A5B4 782 aa7.85□□□□□ -1.15
ATXN3-219ENST00000553488 ANTXRLA6NF34 631 aa7.85□□□□□ -1.15
ATXN3-219ENST00000553488 PIRO00625 290 aa7.85□□□□□ -1.15
ATXN3-219ENST00000553488 CLDN3O15551 220 aa7.85□□□□□ -1.15
ATXN3-219ENST00000553488 XPOTO43592 962 aaKnown RBP7.85□□□□□ -1.15
ATXN3-219ENST00000553488 TNFRSF21O75509 655 aa7.85□□□□□ -1.15
ATXN3-219ENST00000553488 PIGRP01833 764 aa7.85□□□□□ -1.15
ATXN3-219ENST00000553488 NFICP08651 508 aa7.85□□□□□ -1.15
ATXN3-219ENST00000553488 DDX6P26196 483 aaKnown RBP eCLIP7.85□□□□□ -1.15
ATXN3-219ENST00000553488 AVPR1AP37288 418 aa7.85□□□□□ -1.15
ATXN3-219ENST00000553488 TRAPPC10P48553 1259 aa7.85□□□□□ -1.15
ATXN3-219ENST00000553488 TUFMP49411 452 aaKnown RBP7.85□□□□□ -1.15
ATXN3-219ENST00000553488 RING1Q06587 406 aa7.85□□□□□ -1.15
ATXN3-219ENST00000553488 STRN3Q13033 797 aa7.85□□□□□ -1.15
ATXN3-219ENST00000553488 PDIA5Q14554 519 aa7.85□□□□□ -1.15
ATXN3-219ENST00000553488 MTF1Q14872 753 aa7.85□□□□□ -1.15
ATXN3-219ENST00000553488 SETDB1Q15047 1291 aa7.85□□□□□ -1.15
ATXN3-219ENST00000553488 PDGFRLQ15198 375 aa7.85□□□□□ -1.15
ATXN3-219ENST00000553488 IL17AQ16552 155 aa7.85□□□□□ -1.15
ATXN3-219ENST00000553488 C8orf34Q49A92 452 aa7.85□□□□□ -1.15
ATXN3-219ENST00000553488 C9orf57Q5W0N0 161 aa7.85□□□□□ -1.15
ATXN3-219ENST00000553488 TXNDC8Q6A555 127 aa7.85□□□□□ -1.15
ATXN3-219ENST00000553488 JADE1Q6IE81 842 aa7.85□□□□□ -1.15
ATXN3-219ENST00000553488 ARMCX5Q6P1M9 558 aa7.85□□□□□ -1.15
ATXN3-219ENST00000553488 SLC39A4Q6P5W5 647 aa7.85□□□□□ -1.15
ATXN3-219ENST00000553488 IL22RA1Q8N6P7 574 aa7.85□□□□□ -1.15
ATXN3-219ENST00000553488 MAB21L3Q8N8X9 362 aa7.85□□□□□ -1.15
ATXN3-219ENST00000553488 DEFB124Q8NES8 71 aa7.85□□□□□ -1.15
ATXN3-219ENST00000553488 SPPL2BQ8TCT7 592 aa7.85□□□□□ -1.15
ATXN3-219ENST00000553488 GIPC2Q8TF65 315 aa7.85□□□□□ -1.15
ATXN3-219ENST00000553488 C2orf15Q8WU43 125 aaKnown RBP7.85□□□□□ -1.15
ATXN3-219ENST00000553488 SSBP4Q9BWG4 385 aaPredicted RBP7.85□□□□□ -1.15
ATXN3-219ENST00000553488 TPSD1Q9BZJ3 242 aa7.85□□□□□ -1.15
ATXN3-219ENST00000553488 CCSER1Q9C0I3 900 aa7.85□□□□□ -1.15
ATXN3-219ENST00000553488 ECT2Q9H8V3 914 aa7.85□□□□□ -1.15
ATXN3-219ENST00000553488 SRA1Q9HD15 236 aaKnown RBP7.85□□□□□ -1.15
ATXN3-219ENST00000553488 TDP1Q9NUW8 608 aa7.85□□□□□ -1.15
ATXN3-219ENST00000553488 EVLQ9UI08 416 aaPredicted RBP7.85□□□□□ -1.15
ATXN3-219ENST00000553488 DNM3Q9UQ16 869 aa7.85□□□□□ -1.15
ATXN3-219ENST00000553488 NEUROG3Q9Y4Z2 214 aa7.85□□□□□ -1.15
ATXN3-219ENST00000553488 CFAP46Q8IYW2 2715 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms