RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 CYP4V2Q6ZWL3 525 aaPredicted RBP13.46□□□□□ -0.25
SHMT2-205ENST00000553474 RPAINQ86UA6 219 aa13.46□□□□□ -0.25
SHMT2-205ENST00000553474 ZNF296Q8WUU4 475 aaPredicted RBP13.46□□□□□ -0.25
SHMT2-205ENST00000553474 KIF12Q96FN5 646 aa13.46□□□□□ -0.25
SHMT2-205ENST00000553474 CPB2Q96IY4 423 aa13.46□□□□□ -0.25
SHMT2-205ENST00000553474 ZNF668Q96K58 619 aaPredicted RBP13.46□□□□□ -0.25
SHMT2-205ENST00000553474 PAFAH2Q99487 392 aa13.46□□□□□ -0.25
SHMT2-205ENST00000553474 VPS11Q9H270 941 aa13.46□□□□□ -0.25
SHMT2-205ENST00000553474 MLXIPLQ9NP71 852 aa13.46□□□□□ -0.25
SHMT2-205ENST00000553474 TXLNGQ9NUQ3 528 aa13.46□□□□□ -0.25
SHMT2-205ENST00000553474 HESX1Q9UBX0 185 aa13.46□□□□□ -0.25
SHMT2-205ENST00000553474 PHTF1Q9UMS5 762 aa13.46□□□□□ -0.25
SHMT2-205ENST00000553474 PDCD11Q14690 1871 aaKnown RBP13.46□□□□□ -0.26
SHMT2-205ENST00000553474 BCLAF3A2AJT9 711 aaKnown RBP13.45□□□□□ -0.26
SHMT2-205ENST00000553474 E5RJQ4 531 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 EDF1O60869 148 aaKnown RBP13.45□□□□□ -0.26
SHMT2-205ENST00000553474 FKTNO75072 461 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 VTNP04004 478 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 KRT4P19013 534 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 SDC4P31431 198 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 FOXN2P32314 431 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 GTF2A1P52655 376 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-205ENST00000553474 NCALDP61601 193 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 BASP1P80723 227 aaKnown RBP13.45□□□□□ -0.26
SHMT2-205ENST00000553474 SLC6A3Q01959 620 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 KRT81Q14533 505 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 FAM133BQ5BKY9 247 aaKnown RBP13.45□□□□□ -0.26
SHMT2-205ENST00000553474 FNBP1LQ5T0N5 605 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 ANKRD22Q5VYY1 191 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 ARHGAP17Q68EM7 881 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 SLC9A4Q6AI14 798 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 SLC27A1Q6PCB7 646 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 OLFML1Q6UWY5 402 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 FAM71DQ8N9W8 422 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 FAF2Q96CS3 445 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 KATNBL1Q9H079 304 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 GTF2IRD1Q9UHL9 959 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 IKBKGQ9Y6K9 419 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 TRDMT1O14717 391 aaKnown RBP13.45□□□□□ -0.26
SHMT2-205ENST00000553474 APOL1O14791 398 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 HNRNPCL1O60812 293 aaKnown RBP13.45□□□□□ -0.26
SHMT2-205ENST00000553474 ZNF189O75820 626 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-205ENST00000553474 TMEM63AO94886 807 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 NQO1P15559 274 aaKnown RBP13.45□□□□□ -0.26
SHMT2-205ENST00000553474 RPA3P35244 121 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-205ENST00000553474 PTPN9P43378 593 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 NR2C2P49116 596 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 ZKSCAN8Q15776 578 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-205ENST00000553474 GRIK4Q16099 956 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 SEPT7Q16181 437 aaKnown RBP13.45□□□□□ -0.26
SHMT2-205ENST00000553474 DGKDQ16760 1214 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 CGB2Q6NT52 195 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 FITM2Q8N6M3 262 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 BEST2Q8NFU1 509 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 UBA3Q8TBC4 463 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 MZB1Q8WU39 189 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 SLC35F5Q8WV83 523 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 KLHL29Q96CT2 875 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 PEBP4Q96S96 227 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 KLC2Q9H0B6 622 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 ECT2Q9H8V3 914 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 ARHGEF3Q9NR81 526 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-205ENST00000553474 TEX264Q9Y6I9 313 aa13.45□□□□□ -0.26
SHMT2-205ENST00000553474 SCN1AP35498 2009 aa13.44□□□□□ -0.26
SHMT2-205ENST00000553474 GOLGA8MH3BSY2 632 aa13.44□□□□□ -0.26
SHMT2-205ENST00000553474 XPOTO43592 962 aaKnown RBP13.44□□□□□ -0.26
SHMT2-205ENST00000553474 SPAG7O75391 227 aa13.44□□□□□ -0.26
SHMT2-205ENST00000553474 UNC5CO95185 931 aa13.44□□□□□ -0.26
SHMT2-205ENST00000553474 PFKMP08237 780 aa13.44□□□□□ -0.26
SHMT2-205ENST00000553474 HSPA1AP0DMV8 641 aaKnown RBP13.44□□□□□ -0.26
SHMT2-205ENST00000553474 HSPA1BP0DMV9 641 aaKnown RBP13.44□□□□□ -0.26
SHMT2-205ENST00000553474 ALADP13716 330 aa13.44□□□□□ -0.26
SHMT2-205ENST00000553474 AXLP30530 894 aa13.44□□□□□ -0.26
SHMT2-205ENST00000553474 SSTR1P30872 391 aa13.44□□□□□ -0.26
SHMT2-205ENST00000553474 RASSF2P50749 326 aa13.44□□□□□ -0.26
SHMT2-205ENST00000553474 CAP1Q01518 475 aa13.44□□□□□ -0.26
SHMT2-205ENST00000553474 ZBTB6Q15916 424 aa13.44□□□□□ -0.26
SHMT2-205ENST00000553474 GOLGA7BQ2TAP0 167 aa13.44□□□□□ -0.26
SHMT2-205ENST00000553474 BBS9Q3SYG4 887 aa13.44□□□□□ -0.26
SHMT2-205ENST00000553474 CCDC14Q49A88 953 aa13.44□□□□□ -0.26
SHMT2-205ENST00000553474 DUSP28Q4G0W2 176 aa13.44□□□□□ -0.26
SHMT2-205ENST00000553474 MSS51Q4VC12 460 aa13.44□□□□□ -0.26
SHMT2-205ENST00000553474 LGSNQ5TDP6 509 aa13.44□□□□□ -0.26
SHMT2-205ENST00000553474 FYB2Q5VWT5 728 aa13.44□□□□□ -0.26
SHMT2-205ENST00000553474 ASRGL1Q7L266 308 aa13.44□□□□□ -0.26
SHMT2-205ENST00000553474 DPP9Q86TI2 863 aa13.44□□□□□ -0.26
SHMT2-205ENST00000553474 ANKMY2Q8IV38 441 aa13.44□□□□□ -0.26
SHMT2-205ENST00000553474 PLD5Q8N7P1 536 aa13.44□□□□□ -0.26
SHMT2-205ENST00000553474 BANPQ8N9N5 519 aa13.44□□□□□ -0.26
SHMT2-205ENST00000553474 MCUQ8NE86 351 aa13.44□□□□□ -0.26
SHMT2-205ENST00000553474 DCAKDQ8WVC6 231 aa13.44□□□□□ -0.26
SHMT2-205ENST00000553474 SLC44A1Q8WWI5 657 aa13.44□□□□□ -0.26
SHMT2-205ENST00000553474 LRRC37BQ96QE4 947 aa13.44□□□□□ -0.26
SHMT2-205ENST00000553474 RAB3IPQ96QF0 476 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-205ENST00000553474 PAIP2Q9BPZ3 127 aaKnown RBP13.44□□□□□ -0.26
SHMT2-205ENST00000553474 GCOM2Q9BZD3 368 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-205ENST00000553474 USP29Q9HBJ7 922 aa13.44□□□□□ -0.26
SHMT2-205ENST00000553474 ZNF180Q9UJW8 692 aa13.44□□□□□ -0.26
SHMT2-205ENST00000553474 SLC15A5A6NIM6 579 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms