RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 TAS2R40P59535 323 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 NTHL1P78549 312 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 DHX9Q08211 1270 aaKnown RBP8.54□□□□□ -1.04
CHPT1-208ENST00000552215 TXNRD3NBQ6F5E7 133 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 NPNTQ6UXI9 565 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 GPRIN1Q7Z2K8 1008 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 CIR1Q86X95 450 aaPredicted RBP8.54□□□□□ -1.04
CHPT1-208ENST00000552215 RHOT1Q8IXI2 618 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 GSTCDQ8NEC7 633 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 RBM12Q9NTZ6 932 aaKnown RBP8.54□□□□□ -1.04
CHPT1-208ENST00000552215 MPP6Q9NZW5 540 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 SLC12A6Q9UHW9 1150 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 NOCTQ9UK39 431 aaKnown RBP8.54□□□□□ -1.04
CHPT1-208ENST00000552215 GREB1LQ9C091 1923 aaPredicted RBP8.53□□□□□ -1.04
CHPT1-208ENST00000552215 H0YGN5 161 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 MAPK13O15264 365 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 AVPR1AP37288 418 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 NRIP1P48552 1158 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 JAM2P57087 298 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 TPI1P60174 286 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 ARL13BQ3SXY8 428 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 POM121L1PQ3SYA9 428 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 TXNDC8Q6A555 127 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 RFWD3Q6PCD5 774 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 SYN2Q92777 582 aaPredicted RBP8.53□□□□□ -1.04
CHPT1-208ENST00000552215 KHSRPQ92945 711 aaKnown RBP eCLIP8.53□□□□□ -1.041e-6■■■■□ 21.1
CHPT1-208ENST00000552215 TBCBQ99426 244 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 APOL2Q9BQE5 337 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 TRPM5Q9NZQ8 1165 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 CYTH4Q9UIA0 394 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 USP18Q9UMW8 372 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 COQ4Q9Y3A0 265 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 URB1O60287 2271 aaKnown RBP8.53□□□□□ -1.04
CHPT1-208ENST00000552215 A0A1W2PRU2 124 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 GOLGA6CA6NDK9 693 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 GOLGA6BA6NDN3 693 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 EFCAB8A8MWE9 144 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 PIRO00625 290 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 APOEP02649 317 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 LTFP02788 710 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 GOLGA6DP0CG33 693 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 HDCP19113 662 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 ELAVL2Q12926 359 aaKnown RBP8.53□□□□□ -1.04
CHPT1-208ENST00000552215 HSP90B2PQ58FF3 399 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 INTS6LQ5JSJ4 861 aaKnown RBP8.53□□□□□ -1.04
CHPT1-208ENST00000552215 ANKS3Q6ZW76 656 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.53□□□□□ -1.04
CHPT1-208ENST00000552215 NT5DC4Q86YG4 428 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 APBB2Q92870 758 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 WDR70Q9NW82 654 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 GOLGA6AQ9NYA3 693 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 DSEQ9UL01 958 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 CDH9Q9ULB4 789 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 PRR23AA6NEV1 266 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 PAPSS1O43252 624 aaPredicted RBP8.53□□□□□ -1.04
CHPT1-208ENST00000552215 NRLP54845 237 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 PCBP1Q15365 356 aaKnown RBP eCLIP8.53□□□□□ -1.04
CHPT1-208ENST00000552215 MFSD7Q6UXD7 560 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 MYCBPAPQ8TBZ2 947 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 P3H4Q92791 437 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 IGSF21Q96ID5 467 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 GPR88Q9GZN0 384 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 TKTL2Q9H0I9 626 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 KCNK1O00180 336 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 CD48P09326 243 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 KCNE1P15382 129 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 SLC6A3Q01959 620 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 ROR1Q01973 937 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 MAPRE1Q15691 268 aaKnown RBP8.53□□□□□ -1.04
CHPT1-208ENST00000552215 PCSK7Q16549 785 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 IL31Q6EBC2 164 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 DENND1CQ8IV53 801 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 HERC6Q8IVU3 1022 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 ARL14EPQ8N8R7 260 aaPredicted RBP8.53□□□□□ -1.04
CHPT1-208ENST00000552215 CCDC26Q8TAB7 109 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 DDI1Q8WTU0 396 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 MRPS31Q92665 395 aaKnown RBP8.53□□□□□ -1.04
CHPT1-208ENST00000552215 LRRC1Q9BTT6 524 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 DUSP16Q9BY84 665 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 ZDHHC4Q9NPG8 344 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 UTP11Q9Y3A2 253 aaKnown RBP8.53□□□□□ -1.04
CHPT1-208ENST00000552215 SH3BP1Q9Y3L3 701 aa8.53□□□□□ -1.04
CHPT1-208ENST00000552215 A8MX80 341 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 TTI1O43156 1089 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 TRUB2O95900 331 aaKnown RBP8.52□□□□□ -1.05
CHPT1-208ENST00000552215 GLUD1P00367 558 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 C8AP07357 584 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 PAEPP09466 180 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 CDK7P50613 346 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 MGAT3Q09327 533 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 EFHC1Q5JVL4 640 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 RAPGEF5Q92565 580 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 OSBPL8Q9BZF1 889 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 PRDM12Q9H4Q4 367 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 TSR3Q9UJK0 312 aaKnown RBP8.52□□□□□ -1.05
CHPT1-208ENST00000552215 TBX21Q9UL17 535 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 SNX12Q9UMY4 172 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 HIDE1A8MVS5 230 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 TLR5O60602 858 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 ERLIN1O75477 346 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms