RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 ATP2C2O75185 946 aa14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 CDH16O75309 829 aa14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 RARBP10826 455 aa14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 PTPN1P18031 435 aaKnown RBP14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 TGM2P21980 687 aa14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 FLT3LGP49771 235 aa14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 FASTKD3Q14CZ7 662 aaKnown RBP14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 ANKRD22Q5VYY1 191 aa14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 WSCD1Q658N2 575 aa14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 SLC9A4Q6AI14 798 aa14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 C1orf228Q6PIY5 440 aa14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 RPAINQ86UA6 219 aa14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 HACE1Q8IYU2 909 aa14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 FUKQ8N0W3 1084 aa14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 PQLC3Q8N755 202 aa14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 GSTCDQ8NEC7 633 aa14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 PCDH19Q8TAB3 1148 aa14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 DUSP16Q9BY84 665 aa14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 TSPYL2Q9H2G4 693 aaPredicted RBP14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 INTS9Q9NV88 658 aaKnown RBP14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 NAALADL1Q9UQQ1 740 aa14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.62□□□□□ -0.07
RAB3IP-216ENST00000552199 SMAPO00193 183 aa14.61□□□□□ -0.07
RAB3IP-216ENST00000552199 APOL1O14791 398 aa14.61□□□□□ -0.07
RAB3IP-216ENST00000552199 CTSHP09668 335 aa14.61□□□□□ -0.07
RAB3IP-216ENST00000552199 IGFBP6P24592 240 aaPredicted RBP14.61□□□□□ -0.07
RAB3IP-216ENST00000552199 MLH1P40692 756 aa14.61□□□□□ -0.07
RAB3IP-216ENST00000552199 ARL4CP56559 192 aa14.61□□□□□ -0.07
RAB3IP-216ENST00000552199 MGAT3Q09327 533 aa14.61□□□□□ -0.07
RAB3IP-216ENST00000552199 PDIA2Q13087 525 aaKnown RBP14.61□□□□□ -0.07
RAB3IP-216ENST00000552199 HIF1AQ16665 826 aa14.61□□□□□ -0.07
RAB3IP-216ENST00000552199 EFHC1Q5JVL4 640 aa14.61□□□□□ -0.07
RAB3IP-216ENST00000552199 ZC3H18Q86VM9 953 aaKnown RBP14.61□□□□□ -0.07
RAB3IP-216ENST00000552199 SPATS2Q86XZ4 545 aaKnown RBP14.61□□□□□ -0.07
RAB3IP-216ENST00000552199 ZBED8Q8IZ13 594 aa14.61□□□□□ -0.07
RAB3IP-216ENST00000552199 CYP4X1Q8N118 509 aa14.61□□□□□ -0.07
RAB3IP-216ENST00000552199 RIBC1Q8N443 379 aaPredicted RBP14.61□□□□□ -0.07
RAB3IP-216ENST00000552199 FAF2Q96CS3 445 aa14.61□□□□□ -0.07
RAB3IP-216ENST00000552199 ZNF670Q9BS34 389 aa14.61□□□□□ -0.07
RAB3IP-216ENST00000552199 ADAM33Q9BZ11 813 aa14.61□□□□□ -0.07
RAB3IP-216ENST00000552199 FAM107BQ9H098 131 aa14.61□□□□□ -0.07
RAB3IP-216ENST00000552199 EURLQ9NYK6 297 aa14.61□□□□□ -0.07
RAB3IP-216ENST00000552199 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.61□□□□□ -0.07
RAB3IP-216ENST00000552199 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 GOLGA8MH3BSY2 632 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 H7C0C1 242 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 THP07101 528 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 ACAT1P24752 427 aaKnown RBP14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 L1CAMP32004 1257 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 ATP5OP48047 213 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 BCAR1P56945 870 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 TRIM32Q13049 653 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 HP1BP3Q5SSJ5 553 aaPredicted RBP14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 PAQR9Q6ZVX9 377 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 PIGZQ86VD9 579 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 SENP8Q96LD8 212 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 GAD1Q99259 594 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 CCDC134Q9H6E4 229 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 USP29Q9HBJ7 922 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 MIOSQ9NXC5 875 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 GIT1Q9Y2X7 761 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 C5orf60A6NFR6 353 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 CLDN5O00501 218 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 GPR182O15218 404 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 ADAMTS4O75173 837 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 RPLP2P05387 115 aaKnown RBP14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 DRD4P21917 467 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 AFF1P51825 1210 aaKnown RBP14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 ATXN1P54253 815 aaKnown RBP14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 SLC8A3P57103 927 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 GAD2Q05329 585 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 CACNB2Q08289 660 aaPredicted RBP14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 DPYSL2Q16555 572 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 FNBP1LQ5T0N5 605 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 VSTM1Q6UX27 236 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 STRADAQ7RTN6 431 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 MRPL10Q7Z7H8 261 aaKnown RBP14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 TDRPQ86YL5 185 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 CCDC13Q8IYE1 715 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 LPPQ93052 612 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 CHMP6Q96FZ7 201 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 VPS37BQ9H9H4 285 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 CACNG4Q9UBN1 327 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 TBK1Q9UHD2 729 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 GGA2Q9UJY4 613 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 ZMYND8Q9ULU4 1186 aaPredicted RBP14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 FAM169AQ9Y6X4 670 aa14.6□□□□□ -0.07
RAB3IP-216ENST00000552199 EXOC1LA0A1B0GW35 172 aa14.59□□□□□ -0.07
RAB3IP-216ENST00000552199 TCRBV7S3A2A0A539 114 aa14.59□□□□□ -0.07
RAB3IP-216ENST00000552199 FOXO6A8MYZ6 492 aa14.59□□□□□ -0.07
RAB3IP-216ENST00000552199 E7ESA3 106 aa14.59□□□□□ -0.07
RAB3IP-216ENST00000552199 CREB1P16220 341 aa14.59□□□□□ -0.07
RAB3IP-216ENST00000552199 NPR3P17342 541 aa14.59□□□□□ -0.07
RAB3IP-216ENST00000552199 GCAP28676 217 aa14.59□□□□□ -0.07
RAB3IP-216ENST00000552199 MATKP42679 507 aa14.59□□□□□ -0.07
RAB3IP-216ENST00000552199 NRLP54845 237 aa14.59□□□□□ -0.07
RAB3IP-216ENST00000552199 PPP6R3Q5H9R7 873 aaPredicted RBP14.59□□□□□ -0.07
RAB3IP-216ENST00000552199 KIAA0319Q5VV43 1072 aa14.59□□□□□ -0.07
RAB3IP-216ENST00000552199 AGMOQ6ZNB7 445 aa14.59□□□□□ -0.07
RAB3IP-216ENST00000552199 TAB3Q8N5C8 712 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms