RNA–Protein interactions for RNA: ENST00000551549.1

GCN1-208, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 2

Gene GCN1, Length 258 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-208ENST00000551549 RAB20Q9NX57 234 aa10.29□□□□□ -0.76
GCN1-208ENST00000551549 DLL3Q9NYJ7 618 aa10.29□□□□□ -0.76
GCN1-208ENST00000551549 SCML2Q9UQR0 700 aa10.29□□□□□ -0.76
GCN1-208ENST00000551549 PCDHA5Q9Y5H7 936 aa10.29□□□□□ -0.76
GCN1-208ENST00000551549 CCDC163A0A0D9SF12 145 aa10.28□□□□□ -0.76
GCN1-208ENST00000551549 AXIN1O15169 862 aa10.28□□□□□ -0.76
GCN1-208ENST00000551549 TLR5O60602 858 aa10.28□□□□□ -0.76
GCN1-208ENST00000551549 RPP40O75818 363 aaKnown RBP10.28□□□□□ -0.76
GCN1-208ENST00000551549 SMC2O95347 1197 aa10.28□□□□□ -0.76
GCN1-208ENST00000551549 APBB3O95704 486 aa10.28□□□□□ -0.76
GCN1-208ENST00000551549 ADH1CP00326 375 aa10.28□□□□□ -0.76
GCN1-208ENST00000551549 ADH5P11766 374 aa10.28□□□□□ -0.76
GCN1-208ENST00000551549 ACO1P21399 889 aaKnown RBP10.28□□□□□ -0.76
GCN1-208ENST00000551549 DMC1Q14565 340 aa10.28□□□□□ -0.76
GCN1-208ENST00000551549 PUM1Q14671 1186 aaKnown RBP eCLIP10.28□□□□□ -0.76
GCN1-208ENST00000551549 CBWD6Q4V339 395 aa10.28□□□□□ -0.76
GCN1-208ENST00000551549 COBLL1Q53SF7 1204 aa10.28□□□□□ -0.76
GCN1-208ENST00000551549 CBWD3Q5JTY5 395 aa10.28□□□□□ -0.76
GCN1-208ENST00000551549 CBWD5Q5RIA9 395 aa10.28□□□□□ -0.76
GCN1-208ENST00000551549 LY6G5CQ5SRR4 150 aa10.28□□□□□ -0.76
GCN1-208ENST00000551549 PPP1R26Q5T8A7 1209 aaPredicted RBP10.28□□□□□ -0.76
GCN1-208ENST00000551549 ISM2Q6H9L7 571 aa10.28□□□□□ -0.76
GCN1-208ENST00000551549 ERMP1Q7Z2K6 904 aa10.28□□□□□ -0.76
GCN1-208ENST00000551549 DGLUCYQ7Z3D6 616 aa10.28□□□□□ -0.76
GCN1-208ENST00000551549 CACNA2D4Q7Z3S7 1137 aa10.28□□□□□ -0.76
GCN1-208ENST00000551549 KBTBD6Q86V97 674 aa10.28□□□□□ -0.76
GCN1-208ENST00000551549 TMEM25Q86YD3 366 aa10.28□□□□□ -0.76
GCN1-208ENST00000551549 BBS7Q8IWZ6 715 aa10.28□□□□□ -0.76
GCN1-208ENST00000551549 ZC3H3Q8IXZ2 948 aaKnown RBP10.28□□□□□ -0.76
GCN1-208ENST00000551549 CAMKK1Q8N5S9 505 aa10.28□□□□□ -0.76
GCN1-208ENST00000551549 CCDC150Q8NCX0 1101 aa10.28□□□□□ -0.76
GCN1-208ENST00000551549 FBXL13Q8NEE6 735 aa10.28□□□□□ -0.76
GCN1-208ENST00000551549 GAB3Q8WWW8 586 aa10.28□□□□□ -0.76
GCN1-208ENST00000551549 SMARCE1Q969G3 411 aa10.28□□□□□ -0.76
GCN1-208ENST00000551549 HEXIM2Q96MH2 286 aaKnown RBP10.28□□□□□ -0.76
GCN1-208ENST00000551549 GSDMAQ96QA5 445 aa10.28□□□□□ -0.76
GCN1-208ENST00000551549 TSG101Q99816 390 aa10.28□□□□□ -0.76
GCN1-208ENST00000551549 ARID3AQ99856 593 aa10.28□□□□□ -0.76
GCN1-208ENST00000551549 KLF16Q9BXK1 252 aaPredicted RBP10.28□□□□□ -0.76
GCN1-208ENST00000551549 NACA2Q9H009 215 aa10.28□□□□□ -0.76
GCN1-208ENST00000551549 NMUR1Q9HB89 426 aa10.28□□□□□ -0.76
GCN1-208ENST00000551549 TLR8Q9NR97 1041 aaKnown RBP10.28□□□□□ -0.76
GCN1-208ENST00000551549 CISHQ9NSE2 258 aa10.28□□□□□ -0.76
GCN1-208ENST00000551549 SH3BP1Q9Y3L3 701 aa10.28□□□□□ -0.76
GCN1-208ENST00000551549 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.28□□□□□ -0.76
GCN1-208ENST00000551549 A0A1W2PQH9 124 aa10.27□□□□□ -0.77
GCN1-208ENST00000551549 TRIM49BA6NDI0 452 aa10.27□□□□□ -0.77
GCN1-208ENST00000551549 DCLK1O15075 740 aa10.27□□□□□ -0.77
GCN1-208ENST00000551549 MDM4O15151 490 aa10.27□□□□□ -0.77
GCN1-208ENST00000551549 SLC16A3O15427 465 aaKnown RBP10.27□□□□□ -0.77
GCN1-208ENST00000551549 STX10O60499 249 aa10.27□□□□□ -0.77
GCN1-208ENST00000551549 GREM1O60565 184 aa10.27□□□□□ -0.77
GCN1-208ENST00000551549 CCDC192P0DO97 292 aa10.27□□□□□ -0.77
GCN1-208ENST00000551549 CHRM1P11229 460 aaPredicted RBP10.27□□□□□ -0.77
GCN1-208ENST00000551549 TRIM21P19474 475 aaKnown RBP10.27□□□□□ -0.77
GCN1-208ENST00000551549 KIF11P52732 1056 aa10.27□□□□□ -0.77
GCN1-208ENST00000551549 ATXN1P54253 815 aaKnown RBP10.27□□□□□ -0.77
GCN1-208ENST00000551549 RAD23BP54727 409 aa10.27□□□□□ -0.77
GCN1-208ENST00000551549 FOXK2Q01167 660 aa10.27□□□□□ -0.77
GCN1-208ENST00000551549 LMNB2Q03252 620 aa10.27□□□□□ -0.77
GCN1-208ENST00000551549 KDSRQ06136 332 aa10.27□□□□□ -0.77
GCN1-208ENST00000551549 CCDC6Q16204 474 aa10.27□□□□□ -0.77
GCN1-208ENST00000551549 DCAF17Q5H9S7 520 aaPredicted RBP10.27□□□□□ -0.77
GCN1-208ENST00000551549 EMC10Q5UCC4 262 aa10.27□□□□□ -0.77
GCN1-208ENST00000551549 TCERG1LQ5VWI1 586 aa10.27□□□□□ -0.77
GCN1-208ENST00000551549 CCDC33Q8N5R6 958 aa10.27□□□□□ -0.77
GCN1-208ENST00000551549 NAT16Q8N8M0 369 aa10.27□□□□□ -0.77
GCN1-208ENST00000551549 SLC4A11Q8NBS3 891 aa10.27□□□□□ -0.77
GCN1-208ENST00000551549 ACDQ96AP0 544 aa10.27□□□□□ -0.77
GCN1-208ENST00000551549 TMEM176AQ96HP8 235 aa10.27□□□□□ -0.77
GCN1-208ENST00000551549 TIGD1Q96MW7 591 aa10.27□□□□□ -0.77
GCN1-208ENST00000551549 PNKPQ96T60 521 aa10.27□□□□□ -0.77
GCN1-208ENST00000551549 DUSP16Q9BY84 665 aa10.27□□□□□ -0.77
GCN1-208ENST00000551549 ZDHHC4Q9NPG8 344 aa10.27□□□□□ -0.77
GCN1-208ENST00000551549 CYLDQ9NQC7 956 aa10.27□□□□□ -0.77
GCN1-208ENST00000551549 SEMA4GQ9NTN9 838 aa10.27□□□□□ -0.77
GCN1-208ENST00000551549 TBC1D14Q9P2M4 693 aa10.27□□□□□ -0.77
GCN1-208ENST00000551549 EBF1Q9UH73 591 aa10.27□□□□□ -0.77
GCN1-208ENST00000551549 NUDT5Q9UKK9 219 aa10.27□□□□□ -0.77
GCN1-208ENST00000551549 MAN1B1Q9UKM7 699 aa10.27□□□□□ -0.77
GCN1-208ENST00000551549 CHD8Q9HCK8 2581 aa10.27□□□□□ -0.77
GCN1-208ENST00000551549 MED19A0JLT2 244 aaPredicted RBP10.26□□□□□ -0.77
GCN1-208ENST00000551549 PRR5-ARHGAP8B1AHC4 643 aa10.26□□□□□ -0.77
GCN1-208ENST00000551549 TRIM24O15164 1050 aa10.26□□□□□ -0.77
GCN1-208ENST00000551549 LRP3O75074 770 aa10.26□□□□□ -0.77
GCN1-208ENST00000551549 KAT7O95251 611 aa10.26□□□□□ -0.77
GCN1-208ENST00000551549 APODP05090 189 aa10.26□□□□□ -0.77
GCN1-208ENST00000551549 RARGP13631 454 aa10.26□□□□□ -0.77
GCN1-208ENST00000551549 HNRNPLP14866 589 aaKnown RBP eCLIP10.26□□□□□ -0.77
GCN1-208ENST00000551549 CD44P16070 742 aaKnown RBP10.26□□□□□ -0.77
GCN1-208ENST00000551549 TIE1P35590 1138 aa10.26□□□□□ -0.77
GCN1-208ENST00000551549 ATP5C1P36542 298 aaKnown RBP10.26□□□□□ -0.77
GCN1-208ENST00000551549 GRIA2P42262 883 aa10.26□□□□□ -0.77
GCN1-208ENST00000551549 ARHGAP8P85298 464 aa10.26□□□□□ -0.77
GCN1-208ENST00000551549 FKBP3Q00688 224 aaKnown RBP10.26□□□□□ -0.77
GCN1-208ENST00000551549 CSRP2Q16527 193 aa10.26□□□□□ -0.77
GCN1-208ENST00000551549 HTR3DQ70Z44 454 aa10.26□□□□□ -0.77
GCN1-208ENST00000551549 SCD5Q86SK9 330 aa10.26□□□□□ -0.77
GCN1-208ENST00000551549 PHTF2Q8N3S3 785 aa10.26□□□□□ -0.77
GCN1-208ENST00000551549 ALLCQ8N6M5 410 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms