RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 FAF2Q96CS3 445 aa12.02□□□□□ -0.49
RAB5C-208ENST00000551338 PGM2Q96G03 612 aa12.02□□□□□ -0.49
RAB5C-208ENST00000551338 PAAF1Q9BRP4 392 aa12.02□□□□□ -0.49
RAB5C-208ENST00000551338 DDX43Q9NXZ2 648 aaKnown RBP12.02□□□□□ -0.49
RAB5C-208ENST00000551338 SLC12A6Q9UHW9 1150 aa12.02□□□□□ -0.49
RAB5C-208ENST00000551338 TPX2Q9ULW0 747 aaKnown RBP12.02□□□□□ -0.49
RAB5C-208ENST00000551338 SHOC2Q9UQ13 582 aa12.02□□□□□ -0.49
RAB5C-208ENST00000551338 SCN5AQ14524 2016 aa12.02□□□□□ -0.49
RAB5C-208ENST00000551338 ZNF487B1APH4 448 aa12.01□□□□□ -0.49
RAB5C-208ENST00000551338 MCF2LO15068 1137 aa12.01□□□□□ -0.49
RAB5C-208ENST00000551338 ACSL3O95573 720 aa12.01□□□□□ -0.49
RAB5C-208ENST00000551338 TTC4O95801 387 aa12.01□□□□□ -0.49
RAB5C-208ENST00000551338 IFNB1P01574 187 aa12.01□□□□□ -0.49
RAB5C-208ENST00000551338 RBP3P10745 1247 aa12.01□□□□□ -0.49
RAB5C-208ENST00000551338 RPL9P32969 192 aaKnown RBP12.01□□□□□ -0.49
RAB5C-208ENST00000551338 RPL22P35268 128 aaKnown RBP12.01□□□□□ -0.49
RAB5C-208ENST00000551338 MDH1P40925 334 aaKnown RBP12.01□□□□□ -0.49
RAB5C-208ENST00000551338 PLCB3Q01970 1234 aa12.01□□□□□ -0.49
RAB5C-208ENST00000551338 GRIK3Q13003 919 aa12.01□□□□□ -0.49
RAB5C-208ENST00000551338 AUHQ13825 339 aaKnown RBP12.01□□□□□ -0.49
RAB5C-208ENST00000551338 TFDP2Q14188 446 aa12.01□□□□□ -0.49
RAB5C-208ENST00000551338 MORF4L2Q15014 288 aa12.01□□□□□ -0.49
RAB5C-208ENST00000551338 KYNUQ16719 465 aa12.01□□□□□ -0.49
RAB5C-208ENST00000551338 DEFB115Q30KQ5 88 aa12.01□□□□□ -0.49
RAB5C-208ENST00000551338 TIGD5Q53EQ6 642 aa12.01□□□□□ -0.49
RAB5C-208ENST00000551338 TNFAIP8L3Q5GJ75 292 aa12.01□□□□□ -0.49
RAB5C-208ENST00000551338 EFHC1Q5JVL4 640 aa12.01□□□□□ -0.49
RAB5C-208ENST00000551338 SLC9A4Q6AI14 798 aa12.01□□□□□ -0.49
RAB5C-208ENST00000551338 TTC19Q6DKK2 380 aaPredicted RBP12.01□□□□□ -0.49
RAB5C-208ENST00000551338 TRAF7Q6Q0C0 670 aa12.01□□□□□ -0.49
RAB5C-208ENST00000551338 DSTYKQ6XUX3 929 aa12.01□□□□□ -0.49
RAB5C-208ENST00000551338 STRADAQ7RTN6 431 aa12.01□□□□□ -0.49
RAB5C-208ENST00000551338 ZNF598Q86UK7 904 aaKnown RBP12.01□□□□□ -0.49
RAB5C-208ENST00000551338 REM2Q8IYK8 340 aaPredicted RBP12.01□□□□□ -0.49
RAB5C-208ENST00000551338 DEFB106AQ8N104 65 aa12.01□□□□□ -0.49
RAB5C-208ENST00000551338 PLD5Q8N7P1 536 aa12.01□□□□□ -0.49
RAB5C-208ENST00000551338 ZMIZ2Q8NF64 920 aa12.01□□□□□ -0.49
RAB5C-208ENST00000551338 PCDH19Q8TAB3 1148 aa12.01□□□□□ -0.49
RAB5C-208ENST00000551338 NDRG1Q92597 394 aaKnown RBP12.01□□□□□ -0.49
RAB5C-208ENST00000551338 ADAM2Q99965 735 aa12.01□□□□□ -0.49
RAB5C-208ENST00000551338 ZNF670Q9BS34 389 aa12.01□□□□□ -0.49
RAB5C-208ENST00000551338 MED10Q9BTT4 135 aa12.01□□□□□ -0.49
RAB5C-208ENST00000551338 KRT82Q9NSB4 513 aa12.01□□□□□ -0.49
RAB5C-208ENST00000551338 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.01□□□□□ -0.49
RAB5C-208ENST00000551338 FARP1Q9Y4F1 1045 aaPredicted RBP12.01□□□□□ -0.49
RAB5C-208ENST00000551338 TIMM13Q9Y5L4 95 aaPredicted RBP12.01□□□□□ -0.49
RAB5C-208ENST00000551338 SQORQ9Y6N5 450 aa12.01□□□□□ -0.49
RAB5C-208ENST00000551338 SHROOM3Q8TF72 1996 aa12.01□□□□□ -0.49
RAB5C-208ENST00000551338 FNDC1Q4ZHG4 1894 aaPredicted RBP12□□□□□ -0.49
RAB5C-208ENST00000551338 A0A0U1RQF3 1178 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 TLDC2A0PJX2 215 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 MYBPHLA2RUH7 354 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 SMIM23A6NLE4 172 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 A6NNZ2 444 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 NDC80O14777 642 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 APOL1O14791 398 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 AGTP01019 485 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 FAM200BP0CF97 657 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 DESP17661 470 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 TGM2P21980 687 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 BRCC3P46736 316 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 LHX1P48742 406 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 SULT1E1P49888 294 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 PITX1P78337 314 aaPredicted RBP12□□□□□ -0.49
RAB5C-208ENST00000551338 MRPS5P82675 430 aaKnown RBP12□□□□□ -0.49
RAB5C-208ENST00000551338 GUCY1A3Q02108 690 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 DPYSL2Q16555 572 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 ZSCAN26Q16670 478 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 UPP1Q16831 310 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 SKIDA1Q1XH10 827 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 TUBB8Q3ZCM7 444 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 ANKRD20A8PQ5CZ79 823 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 C6orf118Q5T5N4 469 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 MFSD5Q6N075 450 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 CEP128Q6ZU80 1094 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 BNIPLQ7Z465 357 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 RNF180Q86T96 592 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 ECHDC2Q86YB7 292 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 CCDC185Q8N715 623 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 SPATA18Q8TC71 538 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 TRAF3IP1Q8TDR0 691 aaPredicted RBP12□□□□□ -0.49
RAB5C-208ENST00000551338 RSAD2Q8WXG1 361 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 LINC01599Q8WXQ3 324 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 CPT1BQ92523 772 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 C9orf72Q96LT7 481 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 KCTD15Q96SI1 283 aaPredicted RBP12□□□□□ -0.49
RAB5C-208ENST00000551338 SMOQ99835 787 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 RTP3Q9BQQ7 232 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 MAGEB5Q9BZ81 275 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 ROPN1BQ9BZX4 212 aaPredicted RBP12□□□□□ -0.49
RAB5C-208ENST00000551338 ROPN1Q9HAT0 212 aaPredicted RBP12□□□□□ -0.49
RAB5C-208ENST00000551338 LRRC4Q9HBW1 653 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 SAYSD1Q9NPB0 183 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 CREBZFQ9NS37 354 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 TMEM30AQ9NV96 361 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 MTMR10Q9NXD2 777 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 CALCOCO1Q9P1Z2 691 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 PRDM4Q9UKN5 801 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 CDH9Q9ULB4 789 aa12□□□□□ -0.49
RAB5C-208ENST00000551338 AP4E1Q9UPM8 1137 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms