RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 FAM213AQ9BRX8 229 aa12.71□□□□□ -0.38
ERBB3-219ENST00000551242 XAB2Q9HCS7 855 aaKnown RBP12.71□□□□□ -0.38
ERBB3-219ENST00000551242 XPNPEP1Q9NQW7 623 aa12.71□□□□□ -0.38
ERBB3-219ENST00000551242 TBX20Q9UMR3 447 aa12.71□□□□□ -0.38
ERBB3-219ENST00000551242 DMTF1Q9Y222 760 aa12.71□□□□□ -0.38
ERBB3-219ENST00000551242 VARSP26640 1264 aaKnown RBP12.7□□□□□ -0.38
ERBB3-219ENST00000551242 STX3Q13277 289 aa12.7□□□□□ -0.38
ERBB3-219ENST00000551242 OGFRL1Q5TC84 451 aaPredicted RBP12.7□□□□□ -0.38
ERBB3-219ENST00000551242 TTC39BQ5VTQ0 682 aaPredicted RBP12.7□□□□□ -0.38
ERBB3-219ENST00000551242 CC2D2BQ6DHV5 1058 aa12.7□□□□□ -0.38
ERBB3-219ENST00000551242 C15orf52Q6ZUT6 534 aaKnown RBP12.7□□□□□ -0.38
ERBB3-219ENST00000551242 ANO5Q75V66 913 aa12.7□□□□□ -0.38
ERBB3-219ENST00000551242 POLNQ7Z5Q5 900 aa12.7□□□□□ -0.38
ERBB3-219ENST00000551242 SLC26A11Q86WA9 606 aa12.7□□□□□ -0.38
ERBB3-219ENST00000551242 ZNF677Q86XU0 584 aa12.7□□□□□ -0.38
ERBB3-219ENST00000551242 DIS3LQ8TF46 1054 aaKnown RBP12.7□□□□□ -0.38
ERBB3-219ENST00000551242 TMEM174Q8WUU8 243 aa12.7□□□□□ -0.38
ERBB3-219ENST00000551242 ARHGEF1Q92888 912 aaKnown RBP12.7□□□□□ -0.38
ERBB3-219ENST00000551242 CCDC17Q96LX7 622 aa12.7□□□□□ -0.38
ERBB3-219ENST00000551242 SIKE1Q9BRV8 207 aa12.7□□□□□ -0.38
ERBB3-219ENST00000551242 TRIM56Q9BRZ2 755 aaKnown RBP12.7□□□□□ -0.38
ERBB3-219ENST00000551242 TIMMDC1Q9NPL8 285 aa12.7□□□□□ -0.38
ERBB3-219ENST00000551242 NYAP2Q9P242 653 aa12.7□□□□□ -0.38
ERBB3-219ENST00000551242 PRR12Q9ULL5 1215 aa12.7□□□□□ -0.38
ERBB3-219ENST00000551242 AP4B1Q9Y6B7 739 aa12.7□□□□□ -0.38
ERBB3-219ENST00000551242 AK5Q9Y6K8 562 aa12.7□□□□□ -0.38
ERBB3-219ENST00000551242 NRAPQ86VF7 1730 aa12.7□□□□□ -0.38
ERBB3-219ENST00000551242 CASQ2O14958 399 aaPredicted RBP12.7□□□□□ -0.38
ERBB3-219ENST00000551242 SIN3BO75182 1162 aa12.7□□□□□ -0.38
ERBB3-219ENST00000551242 SNNO75324 88 aaPredicted RBP12.7□□□□□ -0.38
ERBB3-219ENST00000551242 RFPL1O75677 317 aa12.7□□□□□ -0.38
ERBB3-219ENST00000551242 ZNF189O75820 626 aaPredicted RBP12.7□□□□□ -0.38
ERBB3-219ENST00000551242 CD48P09326 243 aa12.7□□□□□ -0.38
ERBB3-219ENST00000551242 C6orf52Q5T4I8 152 aa12.7□□□□□ -0.38
ERBB3-219ENST00000551242 VWA5B1Q5TIE3 1220 aa12.7□□□□□ -0.38
ERBB3-219ENST00000551242 KBTBD6Q86V97 674 aa12.7□□□□□ -0.38
ERBB3-219ENST00000551242 PHF13Q86YI8 300 aaPredicted RBP12.7□□□□□ -0.38
ERBB3-219ENST00000551242 ZBTB8BQ8NAP8 495 aaPredicted RBP12.7□□□□□ -0.38
ERBB3-219ENST00000551242 PPP1R14CQ8TAE6 165 aa12.7□□□□□ -0.38
ERBB3-219ENST00000551242 JADE3Q92613 823 aa12.7□□□□□ -0.38
ERBB3-219ENST00000551242 CSRNP1Q96S65 589 aa12.7□□□□□ -0.38
ERBB3-219ENST00000551242 DNAJC16Q9Y2G8 782 aa12.7□□□□□ -0.38
ERBB3-219ENST00000551242 DENRO43583 198 aaKnown RBP12.69□□□□□ -0.38
ERBB3-219ENST00000551242 SNRPAP09012 282 aaKnown RBP12.69□□□□□ -0.38
ERBB3-219ENST00000551242 MAPTP10636 758 aaKnown RBP12.69□□□□□ -0.38
ERBB3-219ENST00000551242 ITGAXP20702 1163 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 MSX2P35548 267 aaPredicted RBP12.69□□□□□ -0.38
ERBB3-219ENST00000551242 WNT7BP56706 349 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 KRT81Q14533 505 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 HSP90AA5PQ58FG0 334 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 MROH9Q5TGP6 573 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 PLA2G4FQ68DD2 849 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 B3GNT9Q6UX72 402 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 FRMD7Q6ZUT3 714 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 ENOSF1Q7L5Y1 443 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 AMIGO2Q86SJ2 522 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 RNF168Q8IYW5 571 aaPredicted RBP12.69□□□□□ -0.38
ERBB3-219ENST00000551242 NDUFAF2Q8N183 169 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 ACTRT2Q8TDY3 377 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 IRGQQ8WZA9 623 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 MFSD14AQ96MC6 490 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 YIPF2Q9BWQ6 316 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 MRPS26Q9BYN8 205 aaKnown RBP12.69□□□□□ -0.38
ERBB3-219ENST00000551242 SH3GLB1Q9Y371 365 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 PCDHAC2Q9Y5I4 1007 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 TEX264Q9Y6I9 313 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 UTRNP46939 3433 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 DDTLA6NHG4 134 aaPredicted RBP12.69□□□□□ -0.38
ERBB3-219ENST00000551242 DKC1O60832 514 aaKnown RBP eCLIP12.69□□□□□ -0.38
ERBB3-219ENST00000551242 KRT37O76014 449 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 BPGMP07738 259 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 ACO1P21399 889 aaKnown RBP12.69□□□□□ -0.38
ERBB3-219ENST00000551242 WASHC5Q12768 1159 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 PDK1Q15118 436 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 WDR44Q5JSH3 913 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 ZNF410Q86VK4 478 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 RTKN2Q8IZC4 609 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 PQLC1Q8N2U9 271 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 GALNT4Q8N4A0 578 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 TMC2Q8TDI7 906 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 TFB1MQ8WVM0 346 aaKnown RBP12.69□□□□□ -0.38
ERBB3-219ENST00000551242 SMYD2Q9NRG4 433 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 APOBEC2Q9Y235 224 aaKnown RBP12.69□□□□□ -0.38
ERBB3-219ENST00000551242 RBBP6Q7Z6E9 1792 aaKnown RBP12.69□□□□□ -0.38
ERBB3-219ENST00000551242 C3orf70A6NLC5 250 aaPredicted RBP12.69□□□□□ -0.38
ERBB3-219ENST00000551242 PEX1O43933 1283 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 HLA-DRAP01903 254 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 CD1EP15812 388 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 CDH2P19022 906 aaPredicted RBP12.69□□□□□ -0.38
ERBB3-219ENST00000551242 NCF2P19878 526 aaPredicted RBP12.69□□□□□ -0.38
ERBB3-219ENST00000551242 HSPA1LP34931 641 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 SPP2Q13103 211 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 DPYSL3Q14195 570 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 LPIN1Q14693 890 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 SCARA3Q6AZY7 606 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 C16orf46Q6P387 395 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 FAM196AQ6ZSG2 479 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 PHTF2Q8N3S3 785 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 CCDC33Q8N5R6 958 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 TMEM161BQ8NDZ6 487 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms