RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 HERC5Q9UII4 1024 aaKnown RBP6.1□□□□□ -1.43
CPSF6-206ENST00000550987 OAZ3Q9UMX2 235 aa6.1□□□□□ -1.43
CPSF6-206ENST00000550987 SCAF8Q9UPN6 1271 aaKnown RBP6.1□□□□□ -1.43
CPSF6-206ENST00000550987 ATP11BQ9Y2G3 1177 aa6.1□□□□□ -1.43
CPSF6-206ENST00000550987 RAD54BQ9Y620 910 aa6.1□□□□□ -1.43
CPSF6-206ENST00000550987 KIAA0100Q14667 2235 aaKnown RBP6.1□□□□□ -1.43
CPSF6-206ENST00000550987 TRPM7Q96QT4 1865 aa6.09□□□□□ -1.43
CPSF6-206ENST00000550987 SCN4AP35499 1836 aa6.09□□□□□ -1.43
CPSF6-206ENST00000550987 TRPM3Q9HCF6 1732 aaPredicted RBP6.09□□□□□ -1.43
CPSF6-206ENST00000550987 AQP7P3A6NL99 342 aa6.09□□□□□ -1.43
CPSF6-206ENST00000550987 DRGXA6NNA5 263 aa6.09□□□□□ -1.43
CPSF6-206ENST00000550987 E9PLN8 166 aa6.09□□□□□ -1.43
CPSF6-206ENST00000550987 MATN2O00339 956 aa6.09□□□□□ -1.43
CPSF6-206ENST00000550987 FCHO1O14526 889 aa6.09□□□□□ -1.43
CPSF6-206ENST00000550987 CCP110O43303 1012 aa6.09□□□□□ -1.43
CPSF6-206ENST00000550987 ASNA1O43681 348 aa6.09□□□□□ -1.43
CPSF6-206ENST00000550987 IPO13O94829 963 aaKnown RBP6.09□□□□□ -1.43
CPSF6-206ENST00000550987 SRGAP2BP0DMP2 458 aa6.09□□□□□ -1.43
CPSF6-206ENST00000550987 MED14OSP0DP75 135 aa6.09□□□□□ -1.43
CPSF6-206ENST00000550987 TAL1P17542 331 aaPredicted RBP6.09□□□□□ -1.43
CPSF6-206ENST00000550987 CHRM3P20309 590 aa6.09□□□□□ -1.43
CPSF6-206ENST00000550987 FDXRP22570 491 aa6.09□□□□□ -1.43
CPSF6-206ENST00000550987 RPS19P39019 145 aaKnown RBP6.09□□□□□ -1.43
CPSF6-206ENST00000550987 CHN2P52757 468 aa6.09□□□□□ -1.43
CPSF6-206ENST00000550987 GEMIN4P57678 1058 aaKnown RBP6.09□□□□□ -1.43
CPSF6-206ENST00000550987 NOMO2Q5JPE7 1267 aa6.09□□□□□ -1.43
CPSF6-206ENST00000550987 TICAM2Q86XR7 235 aa6.09□□□□□ -1.43
CPSF6-206ENST00000550987 KRT73Q86Y46 540 aa6.09□□□□□ -1.43
CPSF6-206ENST00000550987 SUGP1Q8IWZ8 645 aaKnown RBP6.09□□□□□ -1.43
CPSF6-206ENST00000550987 ELOA2Q8IYF1 753 aaPredicted RBP6.09□□□□□ -1.43
CPSF6-206ENST00000550987 GPR135Q8IZ08 494 aa6.09□□□□□ -1.43
CPSF6-206ENST00000550987 CFAP52Q8N1V2 620 aa6.09□□□□□ -1.43
CPSF6-206ENST00000550987 NSUN7Q8NE18 718 aaKnown RBP6.09□□□□□ -1.43
CPSF6-206ENST00000550987 TRIB1Q96RU8 372 aa6.09□□□□□ -1.43
CPSF6-206ENST00000550987 VKORC1Q9BQB6 163 aa6.09□□□□□ -1.43
CPSF6-206ENST00000550987 KATNAL1Q9BW62 490 aa6.09□□□□□ -1.43
CPSF6-206ENST00000550987 LSM14BQ9BX40 385 aaKnown RBP6.09□□□□□ -1.43
CPSF6-206ENST00000550987 TMEM8AQ9HCN3 771 aa6.09□□□□□ -1.43
CPSF6-206ENST00000550987 SEPSECSQ9HD40 501 aaKnown RBP6.09□□□□□ -1.43
CPSF6-206ENST00000550987 SAYSD1Q9NPB0 183 aa6.09□□□□□ -1.43
CPSF6-206ENST00000550987 XPNPEP3Q9NQH7 507 aa6.09□□□□□ -1.43
CPSF6-206ENST00000550987 TMOD4Q9NZQ9 345 aa6.09□□□□□ -1.43
CPSF6-206ENST00000550987 SWAP70Q9UH65 585 aa6.09□□□□□ -1.43
CPSF6-206ENST00000550987 CRYL1Q9Y2S2 319 aa6.09□□□□□ -1.43
CPSF6-206ENST00000550987 USP9XQ93008 2570 aaPredicted RBP6.09□□□□□ -1.44
CPSF6-206ENST00000550987 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.08□□□□□ -1.44
CPSF6-206ENST00000550987 CCNT2O60583 730 aaKnown RBP6.08□□□□□ -1.44
CPSF6-206ENST00000550987 PIAS2O75928 621 aa6.08□□□□□ -1.44
CPSF6-206ENST00000550987 FARP2O94887 1054 aaPredicted RBP6.08□□□□□ -1.44
CPSF6-206ENST00000550987 ATXN1LP0C7T5 689 aaKnown RBP6.08□□□□□ -1.44
CPSF6-206ENST00000550987 XBP1P17861 261 aa6.08□□□□□ -1.44
CPSF6-206ENST00000550987 EGR1P18146 543 aa6.08□□□□□ -1.44
CPSF6-206ENST00000550987 HK1P19367 917 aa6.08□□□□□ -1.44
CPSF6-206ENST00000550987 TNFAIP3P21580 790 aa6.08□□□□□ -1.44
CPSF6-206ENST00000550987 CNTFP26441 200 aa6.08□□□□□ -1.44
CPSF6-206ENST00000550987 MAN1A1P33908 653 aa6.08□□□□□ -1.44
CPSF6-206ENST00000550987 TGFB2P61812 414 aa6.08□□□□□ -1.44
CPSF6-206ENST00000550987 PPP2CBP62714 309 aa6.08□□□□□ -1.44
CPSF6-206ENST00000550987 PPP2CAP67775 309 aa6.08□□□□□ -1.44
CPSF6-206ENST00000550987 ELAVL1Q15717 326 aaKnown RBP6.08□□□□□ -1.44
CPSF6-206ENST00000550987 NPY5RQ15761 445 aa6.08□□□□□ -1.44
CPSF6-206ENST00000550987 TMEM31Q5JXX7 168 aa6.08□□□□□ -1.44
CPSF6-206ENST00000550987 ATPAF1Q5TC12 328 aaPredicted RBP6.08□□□□□ -1.44
CPSF6-206ENST00000550987 TSHZ3Q63HK5 1081 aa6.08□□□□□ -1.44
CPSF6-206ENST00000550987 RAP1GAP2Q684P5 730 aa6.08□□□□□ -1.44
CPSF6-206ENST00000550987 MZT2AQ6P582 158 aa6.08□□□□□ -1.44
CPSF6-206ENST00000550987 RSRC2Q7L4I2 434 aaKnown RBP6.08□□□□□ -1.44
CPSF6-206ENST00000550987 MOGAT3Q86VF5 341 aa6.08□□□□□ -1.44
CPSF6-206ENST00000550987 TAX1BP1Q86VP1 789 aa6.08□□□□□ -1.44
CPSF6-206ENST00000550987 GAS2L3Q86XJ1 694 aa6.08□□□□□ -1.44
CPSF6-206ENST00000550987 CCDC28AQ8IWP9 274 aa6.08□□□□□ -1.44
CPSF6-206ENST00000550987 FTSJ3Q8IY81 847 aaKnown RBP6.08□□□□□ -1.44
CPSF6-206ENST00000550987 GSPT2Q8IYD1 628 aaKnown RBP6.08□□□□□ -1.44
CPSF6-206ENST00000550987 LGI4Q8N135 537 aa6.08□□□□□ -1.44
CPSF6-206ENST00000550987 PPP2R3CQ969Q6 453 aa6.08□□□□□ -1.44
CPSF6-206ENST00000550987 EID2BQ96D98 161 aa6.08□□□□□ -1.44
CPSF6-206ENST00000550987 MARS2Q96GW9 593 aaKnown RBP6.08□□□□□ -1.44
CPSF6-206ENST00000550987 PPM1MQ96MI6 270 aa6.08□□□□□ -1.44
CPSF6-206ENST00000550987 TLR10Q9BXR5 811 aa6.08□□□□□ -1.44
CPSF6-206ENST00000550987 FAM83DQ9H4H8 585 aa6.08□□□□□ -1.44
CPSF6-206ENST00000550987 MSL2Q9HCI7 577 aa6.08□□□□□ -1.44
CPSF6-206ENST00000550987 ZBTB26Q9HCK0 441 aa6.08□□□□□ -1.44
CPSF6-206ENST00000550987 IFT80Q9P2H3 777 aaPredicted RBP6.08□□□□□ -1.44
CPSF6-206ENST00000550987 PDP2Q9P2J9 529 aa6.08□□□□□ -1.44
CPSF6-206ENST00000550987 HECAQ9UBI9 543 aaPredicted RBP6.08□□□□□ -1.44
CPSF6-206ENST00000550987 NCOR1O75376 2440 aa6.08□□□□□ -1.44
CPSF6-206ENST00000550987 CASKIN1Q8WXD9 1431 aa6.08□□□□□ -1.44
CPSF6-206ENST00000550987 AKAP11Q9UKA4 1901 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 J3KRW8 73 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 KCNQ3O43525 872 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 B4GALT3O60512 393 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 PRSS23O95084 383 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 ITGA5P08648 1049 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 INHBBP09529 407 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 C1QTNF9P0C862 333 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 SRGNP10124 158 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 CASP2P42575 452 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 KCNC1P48547 511 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 PXNP49023 591 aaPredicted RBP6.07□□□□□ -1.44
CPSF6-206ENST00000550987 PRKAG1P54619 331 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms