RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 NOCTQ9UK39 431 aaKnown RBP17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 ITIH6Q6UXX5 1313 aa17.05■□□□□ 0.32
CHMP1A-209ENST00000550872 A0A1W2PQJ5 194 aa17.05■□□□□ 0.32
CHMP1A-209ENST00000550872 HEPACAM2A8MVW5 462 aa17.05■□□□□ 0.32
CHMP1A-209ENST00000550872 AP5Z1O43299 807 aa17.05■□□□□ 0.32
CHMP1A-209ENST00000550872 FBXO21O94952 628 aa17.05■□□□□ 0.32
CHMP1A-209ENST00000550872 PRAMEF12O95522 483 aa17.05■□□□□ 0.32
CHMP1A-209ENST00000550872 OAS1P00973 400 aaKnown RBP17.05■□□□□ 0.32
CHMP1A-209ENST00000550872 RPL34P49207 117 aaKnown RBP17.05■□□□□ 0.32
CHMP1A-209ENST00000550872 CDR2Q01850 454 aa17.05■□□□□ 0.32
CHMP1A-209ENST00000550872 PDCLQ13371 301 aa17.05■□□□□ 0.32
CHMP1A-209ENST00000550872 TDGQ13569 410 aa17.05■□□□□ 0.32
CHMP1A-209ENST00000550872 ASIC2Q16515 512 aa17.05■□□□□ 0.32
CHMP1A-209ENST00000550872 CELF5Q8N6W0 485 aaKnown RBP17.05■□□□□ 0.32
CHMP1A-209ENST00000550872 ZNF397Q8NF99 534 aaPredicted RBP17.05■□□□□ 0.32
CHMP1A-209ENST00000550872 USP13Q92995 863 aaPredicted RBP17.05■□□□□ 0.32
CHMP1A-209ENST00000550872 MIS12Q9H081 205 aa17.05■□□□□ 0.32
CHMP1A-209ENST00000550872 RNF38Q9H0F5 515 aa17.05■□□□□ 0.32
CHMP1A-209ENST00000550872 EPHX3Q9H6B9 360 aa17.05■□□□□ 0.32
CHMP1A-209ENST00000550872 CCSER2Q9H7U1 834 aa17.05■□□□□ 0.32
CHMP1A-209ENST00000550872 TDP1Q9NUW8 608 aa17.05■□□□□ 0.32
CHMP1A-209ENST00000550872 OSER1Q9NX31 292 aa17.05■□□□□ 0.32
CHMP1A-209ENST00000550872 RAPGEFL1Q9UHV5 662 aa17.05■□□□□ 0.32
CHMP1A-209ENST00000550872 SORCS3Q9UPU3 1222 aa17.05■□□□□ 0.32
CHMP1A-209ENST00000550872 MYO16Q9Y6X6 1858 aa17.05■□□□□ 0.32
CHMP1A-209ENST00000550872 COCHO43405 550 aa17.04■□□□□ 0.32
CHMP1A-209ENST00000550872 TLR5O60602 858 aa17.04■□□□□ 0.32
CHMP1A-209ENST00000550872 GPR37L1O60883 481 aa17.04■□□□□ 0.32
CHMP1A-209ENST00000550872 MBL2P11226 248 aaPredicted RBP17.04■□□□□ 0.32
CHMP1A-209ENST00000550872 RALAP11233 206 aa17.04■□□□□ 0.32
CHMP1A-209ENST00000550872 RARGP13631 454 aa17.04■□□□□ 0.32
CHMP1A-209ENST00000550872 CHRNB2P17787 502 aa17.04■□□□□ 0.32
CHMP1A-209ENST00000550872 TUBP50607 506 aa17.04■□□□□ 0.32
CHMP1A-209ENST00000550872 SNX16P57768 344 aa17.04■□□□□ 0.32
CHMP1A-209ENST00000550872 DAOAP59103 153 aa17.04■□□□□ 0.32
CHMP1A-209ENST00000550872 YWHAGP61981 247 aaKnown RBP eCLIP17.04■□□□□ 0.32
CHMP1A-209ENST00000550872 FMO1Q01740 532 aa17.04■□□□□ 0.32
CHMP1A-209ENST00000550872 BTBD8Q5XKL5 378 aa17.04■□□□□ 0.32
CHMP1A-209ENST00000550872 SPECC1LQ69YQ0 1117 aa17.04■□□□□ 0.32
CHMP1A-209ENST00000550872 IRF2BP2Q7Z5L9 587 aa17.04■□□□□ 0.32
CHMP1A-209ENST00000550872 TMEM110Q86TL2 294 aa17.04■□□□□ 0.32
CHMP1A-209ENST00000550872 VSTM4Q8IW00 320 aa17.04■□□□□ 0.32
CHMP1A-209ENST00000550872 SCUBE3Q8IX30 993 aa17.04■□□□□ 0.32
CHMP1A-209ENST00000550872 SCML4Q8N228 414 aa17.04■□□□□ 0.32
CHMP1A-209ENST00000550872 TTC16Q8NEE8 873 aa17.04■□□□□ 0.32
CHMP1A-209ENST00000550872 RSPRY1Q96DX4 576 aa17.04■□□□□ 0.32
CHMP1A-209ENST00000550872 PPP1R13BQ96KQ4 1090 aa17.04■□□□□ 0.32
CHMP1A-209ENST00000550872 LRFN3Q9BTN0 628 aa17.04■□□□□ 0.32
CHMP1A-209ENST00000550872 NACA2Q9H009 215 aa17.04■□□□□ 0.32
CHMP1A-209ENST00000550872 CYLDQ9NQC7 956 aa17.04■□□□□ 0.32
CHMP1A-209ENST00000550872 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.04■□□□□ 0.32
CHMP1A-209ENST00000550872 OBP2AQ9NY56 170 aa17.04■□□□□ 0.32
CHMP1A-209ENST00000550872 CLIC5Q9NZA1 410 aa17.04■□□□□ 0.32
CHMP1A-209ENST00000550872 CAPN11Q9UMQ6 739 aa17.04■□□□□ 0.32
CHMP1A-209ENST00000550872 LUC7L2Q9Y383 392 aaKnown RBP17.04■□□□□ 0.32
CHMP1A-209ENST00000550872 E5RJQ4 531 aa17.03■□□□□ 0.32
CHMP1A-209ENST00000550872 PI4K2BG5E9Z4 385 aa17.03■□□□□ 0.32
CHMP1A-209ENST00000550872 LSM8O95777 96 aaKnown RBP17.03■□□□□ 0.32
CHMP1A-209ENST00000550872 PSMC3P17980 439 aa17.03■□□□□ 0.32
CHMP1A-209ENST00000550872 CDH5P33151 784 aaPredicted RBP17.03■□□□□ 0.32
CHMP1A-209ENST00000550872 ATP5C1P36542 298 aaKnown RBP17.03■□□□□ 0.32
CHMP1A-209ENST00000550872 ZBED6P86452 979 aa17.03■□□□□ 0.32
CHMP1A-209ENST00000550872 ZNF268Q14587 947 aaPredicted RBP17.03■□□□□ 0.32
CHMP1A-209ENST00000550872 TMEM31Q5JXX7 168 aa17.03■□□□□ 0.32
CHMP1A-209ENST00000550872 C10orf120Q5SQS8 335 aa17.03■□□□□ 0.32
CHMP1A-209ENST00000550872 VITQ6UXI7 678 aa17.03■□□□□ 0.32
CHMP1A-209ENST00000550872 MFSD6LQ8IWD5 586 aa17.03■□□□□ 0.32
CHMP1A-209ENST00000550872 YAF2Q8IY57 180 aa17.03■□□□□ 0.32
CHMP1A-209ENST00000550872 IPO4Q8TEX9 1081 aaKnown RBP17.03■□□□□ 0.32
CHMP1A-209ENST00000550872 IRGQQ8WZA9 623 aa17.03■□□□□ 0.32
CHMP1A-209ENST00000550872 FAM122AQ96E09 287 aa17.03■□□□□ 0.32
CHMP1A-209ENST00000550872 CPXM1Q96SM3 734 aa17.03■□□□□ 0.32
CHMP1A-209ENST00000550872 AGPAT1Q99943 283 aa17.03■□□□□ 0.32
CHMP1A-209ENST00000550872 NUCKS1Q9H1E3 243 aaKnown RBP17.03■□□□□ 0.32
CHMP1A-209ENST00000550872 SYNCQ9H7C4 482 aa17.03■□□□□ 0.32
CHMP1A-209ENST00000550872 KIF9Q9HAQ2 790 aa17.03■□□□□ 0.32
CHMP1A-209ENST00000550872 SEPT11Q9NVA2 429 aaKnown RBP17.03■□□□□ 0.32
CHMP1A-209ENST00000550872 AIPL1Q9NZN9 384 aa17.03■□□□□ 0.32
CHMP1A-209ENST00000550872 NUDT5Q9UKK9 219 aa17.03■□□□□ 0.32
CHMP1A-209ENST00000550872 ARHGAP26Q9UNA1 814 aa17.03■□□□□ 0.32
CHMP1A-209ENST00000550872 CCL26Q9Y258 94 aa17.03■□□□□ 0.32
CHMP1A-209ENST00000550872 FAM170AA1A519 330 aa17.02■□□□□ 0.32
CHMP1A-209ENST00000550872 YJEFN3A6XGL0 299 aa17.02■□□□□ 0.32
CHMP1A-209ENST00000550872 E7ENQ6 273 aa17.02■□□□□ 0.32
CHMP1A-209ENST00000550872 PAPSS1O43252 624 aaPredicted RBP17.02■□□□□ 0.32
CHMP1A-209ENST00000550872 SART1O43290 800 aaKnown RBP17.02■□□□□ 0.32
CHMP1A-209ENST00000550872 OLFM2O95897 454 aa17.02■□□□□ 0.32
CHMP1A-209ENST00000550872 TBX18O95935 607 aa17.02■□□□□ 0.32
CHMP1A-209ENST00000550872 GYPCP04921 128 aa17.02■□□□□ 0.32
CHMP1A-209ENST00000550872 TNFAIP3P21580 790 aa17.02■□□□□ 0.32
CHMP1A-209ENST00000550872 CASP14P31944 242 aa17.02■□□□□ 0.32
CHMP1A-209ENST00000550872 SLC7A9P82251 487 aa17.02■□□□□ 0.32
CHMP1A-209ENST00000550872 GRM2Q14416 872 aa17.02■□□□□ 0.32
CHMP1A-209ENST00000550872 NAA35Q5VZE5 725 aa17.02■□□□□ 0.32
CHMP1A-209ENST00000550872 BSPRYQ5W0U4 402 aa17.02■□□□□ 0.32
CHMP1A-209ENST00000550872 E4F1Q66K89 784 aaPredicted RBP17.02■□□□□ 0.32
CHMP1A-209ENST00000550872 TRIM72Q6ZMU5 477 aa17.02■□□□□ 0.32
CHMP1A-209ENST00000550872 RSRC2Q7L4I2 434 aaKnown RBP17.02■□□□□ 0.32
CHMP1A-209ENST00000550872 BHLHA9Q7RTU4 235 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms