RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 PDE6CP51160 858 aa23.68■■□□□ 1.38
BRF1-216ENST00000550208 SLC7A9P82251 487 aa23.68■■□□□ 1.38
BRF1-216ENST00000550208 ZXDBP98169 803 aa23.68■■□□□ 1.38
BRF1-216ENST00000550208 RIN3Q8TB24 985 aa23.68■■□□□ 1.38
BRF1-216ENST00000550208 BPIFB1Q8TDL5 484 aa23.68■■□□□ 1.38
BRF1-216ENST00000550208 DEPDC1BQ8WUY9 529 aa23.68■■□□□ 1.38
BRF1-216ENST00000550208 BAP1Q92560 729 aa23.68■■□□□ 1.38
BRF1-216ENST00000550208 XPO4Q9C0E2 1151 aaKnown RBP23.68■■□□□ 1.38
BRF1-216ENST00000550208 ARHGAP26Q9UNA1 814 aa23.68■■□□□ 1.38
BRF1-216ENST00000550208 NUP210Q8TEM1 1887 aaPredicted RBP23.68■■□□□ 1.38
BRF1-216ENST00000550208 TLR5O60602 858 aa23.67■■□□□ 1.38
BRF1-216ENST00000550208 MBL2P11226 248 aaPredicted RBP23.67■■□□□ 1.38
BRF1-216ENST00000550208 PSEN1P49768 467 aa23.67■■□□□ 1.38
BRF1-216ENST00000550208 TUBP50607 506 aa23.67■■□□□ 1.38
BRF1-216ENST00000550208 YWHAGP61981 247 aaKnown RBP eCLIP23.67■■□□□ 1.382e-6■■■■□ 24.1
BRF1-216ENST00000550208 ARID5AQ03989 594 aa23.67■■□□□ 1.38
BRF1-216ENST00000550208 GAS2L3Q86XJ1 694 aa23.67■■□□□ 1.38
BRF1-216ENST00000550208 SCUBE3Q8IX30 993 aa23.67■■□□□ 1.38
BRF1-216ENST00000550208 YAF2Q8IY57 180 aa23.67■■□□□ 1.38
BRF1-216ENST00000550208 TTC16Q8NEE8 873 aa23.67■■□□□ 1.38
BRF1-216ENST00000550208 EPS8L1Q8TE68 723 aa23.67■■□□□ 1.38
BRF1-216ENST00000550208 SH3RF2Q8TEC5 729 aa23.67■■□□□ 1.38
BRF1-216ENST00000550208 CLEC4CQ8WTT0 213 aa23.67■■□□□ 1.38
BRF1-216ENST00000550208 SLC20A1Q8WUM9 679 aa23.67■■□□□ 1.38
BRF1-216ENST00000550208 MIS12Q9H081 205 aa23.67■■□□□ 1.38
BRF1-216ENST00000550208 RBSNQ9H1K0 784 aa23.67■■□□□ 1.38
BRF1-216ENST00000550208 PDCL3Q9H2J4 239 aa23.67■■□□□ 1.38
BRF1-216ENST00000550208 CNGB3Q9NQW8 809 aa23.67■■□□□ 1.38
BRF1-216ENST00000550208 SLC2A4RGQ9NR83 387 aa23.67■■□□□ 1.38
BRF1-216ENST00000550208 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.67■■□□□ 1.38
BRF1-216ENST00000550208 SMPD4Q9NXE4 827 aa23.67■■□□□ 1.38
BRF1-216ENST00000550208 NOCTQ9UK39 431 aaKnown RBP23.67■■□□□ 1.38
BRF1-216ENST00000550208 CPQQ9Y646 472 aa23.67■■□□□ 1.38
BRF1-216ENST00000550208 MYO16Q9Y6X6 1858 aa23.66■■□□□ 1.38
BRF1-216ENST00000550208 YJEFN3A6XGL0 299 aa23.66■■□□□ 1.38
BRF1-216ENST00000550208 E7ENQ6 273 aa23.66■■□□□ 1.38
BRF1-216ENST00000550208 MMEP08473 750 aa23.66■■□□□ 1.38
BRF1-216ENST00000550208 CHRNB2P17787 502 aa23.66■■□□□ 1.38
BRF1-216ENST00000550208 DAOAP59103 153 aa23.66■■□□□ 1.38
BRF1-216ENST00000550208 FCHO2Q0JRZ9 810 aa23.66■■□□□ 1.38
BRF1-216ENST00000550208 IER5LQ5T953 404 aa23.66■■□□□ 1.38
BRF1-216ENST00000550208 TRIM67Q6ZTA4 783 aa23.66■■□□□ 1.38
BRF1-216ENST00000550208 TMEM110Q86TL2 294 aa23.66■■□□□ 1.38
BRF1-216ENST00000550208 SCML4Q8N228 414 aa23.66■■□□□ 1.38
BRF1-216ENST00000550208 ARHGAP18Q8N392 663 aa23.66■■□□□ 1.38
BRF1-216ENST00000550208 C1orf131Q8NDD1 294 aaKnown RBP23.66■■□□□ 1.38
BRF1-216ENST00000550208 ZFYVE19Q96K21 471 aa23.66■■□□□ 1.38
BRF1-216ENST00000550208 BRD9Q9H8M2 597 aa23.66■■□□□ 1.38
BRF1-216ENST00000550208 KIF9Q9HAQ2 790 aa23.66■■□□□ 1.38
BRF1-216ENST00000550208 CYLDQ9NQC7 956 aa23.66■■□□□ 1.38
BRF1-216ENST00000550208 GKN1Q9NS71 199 aa23.66■■□□□ 1.38
BRF1-216ENST00000550208 CLIC5Q9NZA1 410 aa23.66■■□□□ 1.38
BRF1-216ENST00000550208 LEFTY2O00292 366 aa23.65■■□□□ 1.38
BRF1-216ENST00000550208 ZNF263O14978 683 aa23.65■■□□□ 1.38
BRF1-216ENST00000550208 MDM4O15151 490 aa23.65■■□□□ 1.38
BRF1-216ENST00000550208 RALAP11233 206 aa23.65■■□□□ 1.38
BRF1-216ENST00000550208 ACADSBP45954 432 aa23.65■■□□□ 1.38
BRF1-216ENST00000550208 SIGLEC14Q08ET2 396 aa23.65■■□□□ 1.38
BRF1-216ENST00000550208 PDCLQ13371 301 aa23.65■■□□□ 1.38
BRF1-216ENST00000550208 HFE2Q6ZVN8 426 aa23.65■■□□□ 1.38
BRF1-216ENST00000550208 ZNF276Q8N554 614 aa23.65■■□□□ 1.38
BRF1-216ENST00000550208 TTYH3Q9C0H2 523 aa23.65■■□□□ 1.38
BRF1-216ENST00000550208 TJP2Q9UDY2 1190 aa23.65■■□□□ 1.38
BRF1-216ENST00000550208 FAM170AA1A519 330 aa23.64■■□□□ 1.37
BRF1-216ENST00000550208 E5RJQ4 531 aa23.64■■□□□ 1.37
BRF1-216ENST00000550208 FBXO21O94952 628 aa23.64■■□□□ 1.37
BRF1-216ENST00000550208 TCF3P15923 654 aa23.64■■□□□ 1.37
BRF1-216ENST00000550208 ATP5C1P36542 298 aaKnown RBP23.64■■□□□ 1.37
BRF1-216ENST00000550208 CDR2Q01850 454 aa23.64■■□□□ 1.37
BRF1-216ENST00000550208 ZNF77Q15935 545 aa23.64■■□□□ 1.37
BRF1-216ENST00000550208 C10orf120Q5SQS8 335 aa23.64■■□□□ 1.37
BRF1-216ENST00000550208 BSPRYQ5W0U4 402 aa23.64■■□□□ 1.37
BRF1-216ENST00000550208 BTBD8Q5XKL5 378 aa23.64■■□□□ 1.37
BRF1-216ENST00000550208 TMEM35BQ8NCS4 154 aa23.64■■□□□ 1.37
BRF1-216ENST00000550208 IRGQQ8WZA9 623 aa23.64■■□□□ 1.37
BRF1-216ENST00000550208 PPP1R13BQ96KQ4 1090 aa23.64■■□□□ 1.37
BRF1-216ENST00000550208 ZFRQ96KR1 1074 aaKnown RBP23.64■■□□□ 1.37
BRF1-216ENST00000550208 CPXM1Q96SM3 734 aa23.64■■□□□ 1.37
BRF1-216ENST00000550208 NUP58Q9BVL2 599 aa23.64■■□□□ 1.37
BRF1-216ENST00000550208 EDEM3Q9BZQ6 932 aa23.64■■□□□ 1.37
BRF1-216ENST00000550208 NACA2Q9H009 215 aa23.64■■□□□ 1.37
BRF1-216ENST00000550208 THG1LQ9NWX6 298 aaKnown RBP23.64■■□□□ 1.37
BRF1-216ENST00000550208 WNT16Q9UBV4 365 aa23.64■■□□□ 1.37
BRF1-216ENST00000550208 FBXL21Q9UKT6 434 aa23.64■■□□□ 1.37
BRF1-216ENST00000550208 MYO6Q9UM54 1294 aa23.64■■□□□ 1.37
BRF1-216ENST00000550208 LRRC53A6NM62 1247 aa23.63■■□□□ 1.37
BRF1-216ENST00000550208 CHADO15335 359 aa23.63■■□□□ 1.37
BRF1-216ENST00000550208 PAPSS1O43252 624 aaPredicted RBP23.63■■□□□ 1.37
BRF1-216ENST00000550208 CBFA2T2O43439 604 aa23.63■■□□□ 1.37
BRF1-216ENST00000550208 CDH5P33151 784 aaPredicted RBP23.63■■□□□ 1.37
BRF1-216ENST00000550208 FMO1Q01740 532 aa23.63■■□□□ 1.37
BRF1-216ENST00000550208 USP4Q13107 963 aa23.63■■□□□ 1.37
BRF1-216ENST00000550208 MTF1Q14872 753 aa23.63■■□□□ 1.37
BRF1-216ENST00000550208 ARHGAP29Q52LW3 1261 aa23.63■■□□□ 1.37
BRF1-216ENST00000550208 FIGNQ5HY92 759 aa23.63■■□□□ 1.37
BRF1-216ENST00000550208 IRF2BP2Q7Z5L9 587 aa23.63■■□□□ 1.37
BRF1-216ENST00000550208 ZNF677Q86XU0 584 aa23.63■■□□□ 1.37
BRF1-216ENST00000550208 IRF7Q92985 503 aa23.63■■□□□ 1.37
BRF1-216ENST00000550208 WBP2Q969T9 261 aa23.63■■□□□ 1.37
BRF1-216ENST00000550208 ASIC4Q96FT7 647 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms