RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 HOXC11O43248 304 aaPredicted RBP14.39□□□□□ -0.11
TROAP-211ENST00000549891 EXOC3O60645 756 aa14.39□□□□□ -0.11
TROAP-211ENST00000549891 YEATS4O95619 227 aa14.39□□□□□ -0.11
TROAP-211ENST00000549891 P4HA1P13674 534 aa14.39□□□□□ -0.11
TROAP-211ENST00000549891 TRIM21P19474 475 aaKnown RBP14.39□□□□□ -0.11
TROAP-211ENST00000549891 SLC5A3P53794 718 aa14.39□□□□□ -0.11
TROAP-211ENST00000549891 MESP2Q0VG99 397 aa14.39□□□□□ -0.11
TROAP-211ENST00000549891 BIRC3Q13489 604 aa14.39□□□□□ -0.11
TROAP-211ENST00000549891 KNOP1Q1ED39 458 aaKnown RBP14.39□□□□□ -0.11
TROAP-211ENST00000549891 ANO4Q32M45 955 aa14.39□□□□□ -0.11
TROAP-211ENST00000549891 EMC10Q5UCC4 262 aa14.39□□□□□ -0.11
TROAP-211ENST00000549891 SLC23A3Q6PIS1 610 aa14.39□□□□□ -0.11
TROAP-211ENST00000549891 SLC36A4Q6YBV0 504 aa14.39□□□□□ -0.11
TROAP-211ENST00000549891 ARMCX6Q7L4S7 300 aa14.39□□□□□ -0.11
TROAP-211ENST00000549891 RABEPKQ7Z6M1 372 aa14.39□□□□□ -0.11
TROAP-211ENST00000549891 SFTPA1Q8IWL2 248 aa14.39□□□□□ -0.11
TROAP-211ENST00000549891 PHTF2Q8N3S3 785 aa14.39□□□□□ -0.11
TROAP-211ENST00000549891 ZNF513Q8N8E2 541 aaPredicted RBP14.39□□□□□ -0.11
TROAP-211ENST00000549891 CEP76Q8TAP6 659 aa14.39□□□□□ -0.11
TROAP-211ENST00000549891 ZNF516Q92618 1163 aa14.39□□□□□ -0.11
TROAP-211ENST00000549891 KCNK16Q96T55 309 aa14.39□□□□□ -0.11
TROAP-211ENST00000549891 FBXO44Q9H4M3 255 aa14.39□□□□□ -0.11
TROAP-211ENST00000549891 SPHK2Q9NRA0 654 aa14.39□□□□□ -0.11
TROAP-211ENST00000549891 IL37Q9NZH6 218 aa14.39□□□□□ -0.11
TROAP-211ENST00000549891 TFIP11Q9UBB9 837 aaKnown RBP14.39□□□□□ -0.11
TROAP-211ENST00000549891 PVALEFA0A1B0GWK0 134 aa14.38□□□□□ -0.11
TROAP-211ENST00000549891 FAM92AA1XBS5 289 aa14.38□□□□□ -0.11
TROAP-211ENST00000549891 ADAM23O75077 832 aa14.38□□□□□ -0.11
TROAP-211ENST00000549891 TULP3O75386 442 aa14.38□□□□□ -0.11
TROAP-211ENST00000549891 CHRM1P11229 460 aaPredicted RBP14.38□□□□□ -0.11
TROAP-211ENST00000549891 PTGER3P43115 390 aa14.38□□□□□ -0.11
TROAP-211ENST00000549891 ATXN3P54252 364 aaPredicted RBP14.38□□□□□ -0.11
TROAP-211ENST00000549891 EHHADHQ08426 723 aa14.38□□□□□ -0.11
TROAP-211ENST00000549891 GOLGA8FQ08AF8 430 aa14.38□□□□□ -0.11
TROAP-211ENST00000549891 GOLGA8DPQ0D2H9 430 aa14.38□□□□□ -0.11
TROAP-211ENST00000549891 BMT2Q1RMZ1 405 aa14.38□□□□□ -0.11
TROAP-211ENST00000549891 MAP7D1Q3KQU3 841 aa14.38□□□□□ -0.11
TROAP-211ENST00000549891 C10orf76Q5T2E6 689 aa14.38□□□□□ -0.11
TROAP-211ENST00000549891 ETFBKMTQ8IXQ9 262 aa14.38□□□□□ -0.11
TROAP-211ENST00000549891 NAT16Q8N8M0 369 aa14.38□□□□□ -0.11
TROAP-211ENST00000549891 TERB1Q8NA31 727 aa14.38□□□□□ -0.11
TROAP-211ENST00000549891 SCAMP5Q8TAC9 235 aa14.38□□□□□ -0.11
TROAP-211ENST00000549891 ZFRQ96KR1 1074 aaKnown RBP14.38□□□□□ -0.11
TROAP-211ENST00000549891 ADAM33Q9BZ11 813 aa14.38□□□□□ -0.11
TROAP-211ENST00000549891 SMYD3Q9H7B4 428 aa14.38□□□□□ -0.11
TROAP-211ENST00000549891 CCSER2Q9H7U1 834 aa14.38□□□□□ -0.11
TROAP-211ENST00000549891 MBD1Q9UIS9 605 aaPredicted RBP14.38□□□□□ -0.11
TROAP-211ENST00000549891 C1QTNF9BB2RNN3 333 aa14.37□□□□□ -0.11
TROAP-211ENST00000549891 POLR2DO15514 142 aaKnown RBP14.37□□□□□ -0.11
TROAP-211ENST00000549891 AP1G2O75843 785 aa14.37□□□□□ -0.11
TROAP-211ENST00000549891 ZDHHC11BP0C7U3 371 aa14.37□□□□□ -0.11
TROAP-211ENST00000549891 C1QTNF9P0C862 333 aa14.37□□□□□ -0.11
TROAP-211ENST00000549891 HOXB2P14652 356 aa14.37□□□□□ -0.11
TROAP-211ENST00000549891 ENGP17813 658 aa14.37□□□□□ -0.11
TROAP-211ENST00000549891 NTSR1P30989 418 aa14.37□□□□□ -0.11
TROAP-211ENST00000549891 MAPK8P45983 427 aa14.37□□□□□ -0.11
TROAP-211ENST00000549891 CDH8P55286 799 aa14.37□□□□□ -0.11
TROAP-211ENST00000549891 NCOA4Q13772 614 aa14.37□□□□□ -0.11
TROAP-211ENST00000549891 DUOXA1Q1HG43 343 aa14.37□□□□□ -0.11
TROAP-211ENST00000549891 PEAR1Q5VY43 1037 aaPredicted RBP14.37□□□□□ -0.11
TROAP-211ENST00000549891 SDE2Q6IQ49 451 aa14.37□□□□□ -0.11
TROAP-211ENST00000549891 SHC4Q6S5L8 630 aa14.37□□□□□ -0.11
TROAP-211ENST00000549891 BBS7Q8IWZ6 715 aa14.37□□□□□ -0.11
TROAP-211ENST00000549891 KDF1Q8NAX2 398 aaPredicted RBP14.37□□□□□ -0.11
TROAP-211ENST00000549891 DEFB124Q8NES8 71 aa14.37□□□□□ -0.11
TROAP-211ENST00000549891 XPO6Q96QU8 1125 aaKnown RBP14.37□□□□□ -0.11
TROAP-211ENST00000549891 SLC39A2Q9NP94 309 aa14.37□□□□□ -0.11
TROAP-211ENST00000549891 TLR8Q9NR97 1041 aaKnown RBP14.37□□□□□ -0.11
TROAP-211ENST00000549891 KRT82Q9NSB4 513 aa14.37□□□□□ -0.11
TROAP-211ENST00000549891 TMEM74BQ9NUR3 256 aa14.37□□□□□ -0.11
TROAP-211ENST00000549891 FAM13BQ9NYF5 915 aa14.37□□□□□ -0.11
TROAP-211ENST00000549891 GMIPQ9P107 970 aa14.37□□□□□ -0.11
TROAP-211ENST00000549891 PILRBQ9UKJ0 227 aa14.37□□□□□ -0.11
TROAP-211ENST00000549891 ZMIZ1Q9ULJ6 1067 aa14.37□□□□□ -0.11
TROAP-211ENST00000549891 WASF3Q9UPY6 502 aa14.37□□□□□ -0.11
TROAP-211ENST00000549891 STARD13Q9Y3M8 1113 aa14.37□□□□□ -0.11
TROAP-211ENST00000549891 UPK3BL1B0FP48 263 aa14.36□□□□□ -0.11
TROAP-211ENST00000549891 UPK3BL2E5RIL1 263 aa14.36□□□□□ -0.11
TROAP-211ENST00000549891 K7ELQ4 463 aaPredicted RBP14.36□□□□□ -0.11
TROAP-211ENST00000549891 TLR5O60602 858 aa14.36□□□□□ -0.11
TROAP-211ENST00000549891 ZNF217O75362 1048 aa14.36□□□□□ -0.11
TROAP-211ENST00000549891 CFIP05156 583 aa14.36□□□□□ -0.11
TROAP-211ENST00000549891 IRF1P10914 325 aa14.36□□□□□ -0.11
TROAP-211ENST00000549891 PDIA4P13667 645 aaKnown RBP14.36□□□□□ -0.11
TROAP-211ENST00000549891 RDXP35241 583 aaKnown RBP14.36□□□□□ -0.11
TROAP-211ENST00000549891 CASP4P49662 377 aa14.36□□□□□ -0.11
TROAP-211ENST00000549891 CLDN10P78369 228 aa14.36□□□□□ -0.11
TROAP-211ENST00000549891 RPL6Q02878 288 aaKnown RBP14.36□□□□□ -0.11
TROAP-211ENST00000549891 GFPT1Q06210 699 aaPredicted RBP14.36□□□□□ -0.11
TROAP-211ENST00000549891 SGSM1Q2NKQ1 1148 aa14.36□□□□□ -0.11
TROAP-211ENST00000549891 GRAMD4Q6IC98 578 aa14.36□□□□□ -0.11
TROAP-211ENST00000549891 SCARA5Q6ZMJ2 495 aa14.36□□□□□ -0.11
TROAP-211ENST00000549891 PAQR9Q6ZVX9 377 aa14.36□□□□□ -0.11
TROAP-211ENST00000549891 TMEM25Q86YD3 366 aa14.36□□□□□ -0.11
TROAP-211ENST00000549891 FUKQ8N0W3 1084 aa14.36□□□□□ -0.11
TROAP-211ENST00000549891 HDDC3Q8N4P3 179 aa14.36□□□□□ -0.11
TROAP-211ENST00000549891 FRMD1Q8N878 549 aa14.36□□□□□ -0.11
TROAP-211ENST00000549891 PARD3BQ8TEW8 1205 aa14.36□□□□□ -0.11
TROAP-211ENST00000549891 TAF4BQ92750 862 aa14.36□□□□□ -0.11
TROAP-211ENST00000549891 SCNM1Q9BWG6 230 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms