RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 NXPE2Q96DL1 559 aa9.51□□□□□ -0.89
UBE2N-203ENST00000549490 ZFRQ96KR1 1074 aaKnown RBP9.51□□□□□ -0.89
UBE2N-203ENST00000549490 CEP295NLQ96MC4 621 aa9.51□□□□□ -0.89
UBE2N-203ENST00000549490 PLIN2Q99541 437 aa9.51□□□□□ -0.89
UBE2N-203ENST00000549490 CLMPQ9H6B4 373 aa9.51□□□□□ -0.89
UBE2N-203ENST00000549490 ITM2CQ9NQX7 267 aa9.51□□□□□ -0.89
UBE2N-203ENST00000549490 SPHK2Q9NRA0 654 aa9.51□□□□□ -0.89
UBE2N-203ENST00000549490 GDAP2Q9NXN4 497 aa9.51□□□□□ -0.89
UBE2N-203ENST00000549490 KCND2Q9NZV8 630 aa9.51□□□□□ -0.89
UBE2N-203ENST00000549490 GMIPQ9P107 970 aa9.51□□□□□ -0.89
UBE2N-203ENST00000549490 AGO2Q9UKV8 859 aaKnown RBP9.51□□□□□ -0.89
UBE2N-203ENST00000549490 STYXL1Q9Y6J8 313 aa9.51□□□□□ -0.89
UBE2N-203ENST00000549490 ATMQ13315 3056 aa9.51□□□□□ -0.89
UBE2N-203ENST00000549490 METTL12A8MUP2 240 aa9.5□□□□□ -0.89
UBE2N-203ENST00000549490 KCNJ18B7U540 433 aa9.5□□□□□ -0.89
UBE2N-203ENST00000549490 WASH3PC4AMC7 463 aa9.5□□□□□ -0.89
UBE2N-203ENST00000549490 PRRT4C9JH25 899 aa9.5□□□□□ -0.89
UBE2N-203ENST00000549490 PYCARD-AS1I3L0S3 204 aa9.5□□□□□ -0.89
UBE2N-203ENST00000549490 RRP8O43159 456 aaKnown RBP9.5□□□□□ -0.89
UBE2N-203ENST00000549490 PLCG1P19174 1290 aa9.5□□□□□ -0.89
UBE2N-203ENST00000549490 LMO2P25791 158 aa9.5□□□□□ -0.89
UBE2N-203ENST00000549490 GRK6P43250 576 aa9.5□□□□□ -0.89
UBE2N-203ENST00000549490 CSNK1EP49674 416 aaKnown RBP9.5□□□□□ -0.89
UBE2N-203ENST00000549490 TOB1P50616 345 aaPredicted RBP9.5□□□□□ -0.89
UBE2N-203ENST00000549490 CLDN6P56747 220 aa9.5□□□□□ -0.89
UBE2N-203ENST00000549490 PSMC1P62191 440 aaKnown RBP9.5□□□□□ -0.89
UBE2N-203ENST00000549490 NOP14P78316 857 aaKnown RBP9.5□□□□□ -0.89
UBE2N-203ENST00000549490 TFAMQ00059 246 aaKnown RBP9.5□□□□□ -0.89
UBE2N-203ENST00000549490 POU5F1Q01860 360 aaKnown RBP9.5□□□□□ -0.89
UBE2N-203ENST00000549490 SOWAHAQ2M3V2 549 aa9.5□□□□□ -0.89
UBE2N-203ENST00000549490 KIF19Q2TAC6 998 aa9.5□□□□□ -0.89
UBE2N-203ENST00000549490 GRAMD4Q6IC98 578 aa9.5□□□□□ -0.89
UBE2N-203ENST00000549490 DTHD1Q6ZMT9 781 aa9.5□□□□□ -0.89
UBE2N-203ENST00000549490 CENPQQ7L2Z9 268 aaPredicted RBP9.5□□□□□ -0.89
UBE2N-203ENST00000549490 NT5DC4Q86YG4 428 aa9.5□□□□□ -0.89
UBE2N-203ENST00000549490 BBS7Q8IWZ6 715 aa9.5□□□□□ -0.89
UBE2N-203ENST00000549490 KCTD17Q8N5Z5 321 aa9.5□□□□□ -0.89
UBE2N-203ENST00000549490 MYCT1Q8N699 235 aa9.5□□□□□ -0.89
UBE2N-203ENST00000549490 LRRC52Q8N7C0 313 aa9.5□□□□□ -0.89
UBE2N-203ENST00000549490 C1orf216Q8TAB5 229 aa9.5□□□□□ -0.89
UBE2N-203ENST00000549490 WBP2Q969T9 261 aa9.5□□□□□ -0.89
UBE2N-203ENST00000549490 C8orf76Q96K31 380 aa9.5□□□□□ -0.89
UBE2N-203ENST00000549490 FAM84AQ96KN4 292 aa9.5□□□□□ -0.89
UBE2N-203ENST00000549490 FIZ1Q96SL8 496 aa9.5□□□□□ -0.89
UBE2N-203ENST00000549490 SYT15Q9BQS2 421 aa9.5□□□□□ -0.89
UBE2N-203ENST00000549490 REEP2Q9BRK0 252 aa9.5□□□□□ -0.89
UBE2N-203ENST00000549490 IKZF4Q9H2S9 585 aa9.5□□□□□ -0.89
UBE2N-203ENST00000549490 CRTAC1Q9NQ79 661 aa9.5□□□□□ -0.89
UBE2N-203ENST00000549490 DNAJC17Q9NVM6 304 aaKnown RBP9.5□□□□□ -0.89
UBE2N-203ENST00000549490 EHD2Q9NZN4 543 aa9.5□□□□□ -0.89
UBE2N-203ENST00000549490 USP36Q9P275 1121 aaKnown RBP9.5□□□□□ -0.89
UBE2N-203ENST00000549490 EIF2B4Q9UI10 523 aaKnown RBP9.5□□□□□ -0.89
UBE2N-203ENST00000549490 ODF2LQ9ULJ1 636 aa9.5□□□□□ -0.89
UBE2N-203ENST00000549490 PCDHB6Q9Y5E3 794 aa9.5□□□□□ -0.89
UBE2N-203ENST00000549490 SNX9Q9Y5X1 595 aa9.5□□□□□ -0.89
UBE2N-203ENST00000549490 SLCO1B1Q9Y6L6 691 aa9.5□□□□□ -0.89
UBE2N-203ENST00000549490 SHROOM3Q8TF72 1996 aa9.5□□□□□ -0.89
UBE2N-203ENST00000549490 KNL1Q8NG31 2342 aa9.49□□□□□ -0.89
UBE2N-203ENST00000549490 F8VP50 259 aa9.49□□□□□ -0.89
UBE2N-203ENST00000549490 TULP1O00294 542 aaPredicted RBP9.49□□□□□ -0.89
UBE2N-203ENST00000549490 GFRA2O00451 464 aa9.49□□□□□ -0.89
UBE2N-203ENST00000549490 COCHO43405 550 aa9.49□□□□□ -0.89
UBE2N-203ENST00000549490 TRAK2O60296 914 aa9.49□□□□□ -0.89
UBE2N-203ENST00000549490 FAM13AO94988 1023 aa9.49□□□□□ -0.89
UBE2N-203ENST00000549490 IL18RAPO95256 599 aa9.49□□□□□ -0.89
UBE2N-203ENST00000549490 JUPP14923 745 aa9.49□□□□□ -0.89
UBE2N-203ENST00000549490 ANXA13P27216 316 aa9.49□□□□□ -0.89
UBE2N-203ENST00000549490 ZNF131P52739 623 aa9.49□□□□□ -0.89
UBE2N-203ENST00000549490 GTF2BQ00403 316 aa9.49□□□□□ -0.89
UBE2N-203ENST00000549490 CYP27A1Q02318 531 aa9.49□□□□□ -0.89
UBE2N-203ENST00000549490 KCNC4Q03721 635 aa9.49□□□□□ -0.89
UBE2N-203ENST00000549490 ST3GAL1Q11201 340 aa9.49□□□□□ -0.89
UBE2N-203ENST00000549490 FUT11Q495W5 492 aa9.49□□□□□ -0.89
UBE2N-203ENST00000549490 C6orf118Q5T5N4 469 aa9.49□□□□□ -0.89
UBE2N-203ENST00000549490 TDRD10Q5VZ19 366 aaKnown RBP9.49□□□□□ -0.89
UBE2N-203ENST00000549490 SLFN12LQ6IEE8 588 aa9.49□□□□□ -0.89
UBE2N-203ENST00000549490 CSGALNACT2Q8N6G5 542 aa9.49□□□□□ -0.89
UBE2N-203ENST00000549490 TOP6BLQ8N6T0 577 aa9.49□□□□□ -0.89
UBE2N-203ENST00000549490 SNIP1Q8TAD8 396 aaKnown RBP9.49□□□□□ -0.89
UBE2N-203ENST00000549490 C8orf48Q96LL4 319 aa9.49□□□□□ -0.89
UBE2N-203ENST00000549490 DUSP9Q99956 384 aaKnown RBP9.49□□□□□ -0.89
UBE2N-203ENST00000549490 TRIM9Q9C026 710 aa9.49□□□□□ -0.89
UBE2N-203ENST00000549490 MKRN2Q9H000 416 aaKnown RBP9.49□□□□□ -0.89
UBE2N-203ENST00000549490 PARVGQ9HBI0 331 aa9.49□□□□□ -0.89
UBE2N-203ENST00000549490 DNMT3LQ9UJW3 386 aa9.49□□□□□ -0.89
UBE2N-203ENST00000549490 CDH9Q9ULB4 789 aa9.49□□□□□ -0.89
UBE2N-203ENST00000549490 NOL7Q9UMY1 257 aaKnown RBP9.49□□□□□ -0.89
UBE2N-203ENST00000549490 SH3BP1Q9Y3L3 701 aa9.49□□□□□ -0.89
UBE2N-203ENST00000549490 SNX11Q9Y5W9 270 aa9.49□□□□□ -0.89
UBE2N-203ENST00000549490 AK5Q9Y6K8 562 aa9.49□□□□□ -0.89
UBE2N-203ENST00000549490 KNTC1P50748 2209 aa9.49□□□□□ -0.89
UBE2N-203ENST00000549490 MYO18AQ92614 2054 aaKnown RBP9.48□□□□□ -0.89
UBE2N-203ENST00000549490 LAD1O00515 517 aa9.48□□□□□ -0.89
UBE2N-203ENST00000549490 KCNK3O14649 394 aa9.48□□□□□ -0.89
UBE2N-203ENST00000549490 TRIM66O15016 1216 aa9.48□□□□□ -0.89
UBE2N-203ENST00000549490 CACNG3O60359 315 aa9.48□□□□□ -0.89
UBE2N-203ENST00000549490 PDGFRBP09619 1106 aa9.48□□□□□ -0.89
UBE2N-203ENST00000549490 ADSSP30520 456 aa9.48□□□□□ -0.89
UBE2N-203ENST00000549490 PRPHP41219 470 aa9.48□□□□□ -0.89
UBE2N-203ENST00000549490 TPMTP51580 245 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms