RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 C7orf31Q8N865 590 aa19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 FBF1Q8TES7 1133 aa19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 CLEC4CQ8WTT0 213 aa19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 KBTBD7Q8WVZ9 684 aa19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 DNAJB3Q8WWF6 145 aa19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 PAIP2Q9BPZ3 127 aaKnown RBP19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 PPCSQ9HAB8 311 aa19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 KLK14Q9P0G3 267 aa19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 SLC15A5A6NIM6 579 aa19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 SMAPO00193 183 aa19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 RASSF9O75901 435 aa19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 PDGFRBP09619 1106 aa19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 FGFR1P11362 822 aa19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 CCDC130P13994 396 aa19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 IL9RQ01113 521 aa19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 RNASELQ05823 741 aaKnown RBP19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 ARHGAP17Q68EM7 881 aa19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 PCDH19Q8TAB3 1148 aa19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 TEKT4Q8WW24 435 aa19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 SMC6Q96SB8 1091 aa19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 SLC40A1Q9NP59 571 aa19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 SENP1Q9P0U3 644 aa19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 GGT7Q9UJ14 662 aa19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 PIRO00625 290 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 SPTLC1O15269 473 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 MAP3K6O95382 1288 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 LMO2P25791 158 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 RPA3P35244 121 aaPredicted RBP19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 KCNJ11Q14654 390 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 ZNF618Q5T7W0 954 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 SPATA21Q7Z572 469 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 PALM2Q8IXS6 379 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 STK32AQ8WU08 396 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 USP6NLQ92738 828 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 DHRS4Q9BTZ2 278 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 RNF39Q9H2S5 420 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 ACSS3Q9H6R3 686 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 SLC5A4Q9NY91 659 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 FLRT1Q9NZU1 646 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 FETUBQ9UGM5 382 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 GRID1Q9ULK0 1009 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 UBQLN1Q9UMX0 589 aaKnown RBP19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 SLC12A4Q9UP95 1085 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 HEY1Q9Y5J3 304 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 SMIM28A0A1B0GU29 152 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 APOL1O14791 398 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 TYROBPO43914 113 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 SUN1O94901 812 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 ADORA2BP29275 332 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 SLC18A1P54219 525 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 ADAM17P78536 824 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 ZNF200P98182 395 aaPredicted RBP19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 MFSD10Q14728 455 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 FBXO47Q5MNV8 452 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 OLFML2BQ68BL8 750 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 SLC9A4Q6AI14 798 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 ADGRD1Q6QNK2 874 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 PAFAH2Q99487 392 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 HAUS2Q9NVX0 235 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 PRKAG3Q9UGI9 489 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 CHMP2BQ9UQN3 213 aa19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 PIN4Q9Y237 131 aaKnown RBP19.31■□□□□ 0.68
PRPF40B-208ENST00000548436 MDM4O15151 490 aa19.3■□□□□ 0.68
PRPF40B-208ENST00000548436 KCNN4O15554 427 aa19.3■□□□□ 0.68
PRPF40B-208ENST00000548436 DNAJC8O75937 253 aaPredicted RBP19.3■□□□□ 0.68
PRPF40B-208ENST00000548436 TGM2P21980 687 aa19.3■□□□□ 0.68
PRPF40B-208ENST00000548436 ATXN1P54253 815 aaKnown RBP19.3■□□□□ 0.68
PRPF40B-208ENST00000548436 SNX17Q15036 470 aa19.3■□□□□ 0.68
PRPF40B-208ENST00000548436 PCBP1Q15365 356 aaKnown RBP eCLIP19.3■□□□□ 0.68
PRPF40B-208ENST00000548436 LRRN4Q8WUT4 740 aa19.3■□□□□ 0.68
PRPF40B-208ENST00000548436 TBCBQ99426 244 aa19.3■□□□□ 0.68
PRPF40B-208ENST00000548436 CPA4Q9UI42 421 aa19.3■□□□□ 0.68
PRPF40B-208ENST00000548436 SMG5Q9UPR3 1016 aaKnown RBP19.3■□□□□ 0.68
PRPF40B-208ENST00000548436 TREHO43280 583 aa19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 RBL1P28749 1068 aa19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 ELK3P41970 407 aa19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 BCAR1P56945 870 aa19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 MTFR1Q15390 333 aa19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 SLC1A5Q15758 541 aa19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 FAM133BQ5BKY9 247 aaKnown RBP19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 TLK2Q86UE8 772 aa19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 ZDHHC17Q8IUH5 632 aa19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 CRYBG2Q8N1P7 616 aa19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 ANKRD52Q8NB46 1076 aa19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 FAF2Q96CS3 445 aa19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 C11orf84Q9BUA3 381 aaPredicted RBP19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 MAGEB5Q9BZ81 275 aa19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 GOLGA2P5Q9HBQ8 144 aa19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 ZNF638Q14966 1978 aaKnown RBP19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 KPNA7A9QM74 516 aa19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 GSTA1P08263 222 aa19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 KRT4P19013 534 aa19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 CA4P22748 312 aa19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 GNL1P36915 607 aaPredicted RBP19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 SOX4Q06945 474 aaPredicted RBP19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 BST2Q10589 180 aaKnown RBP19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 XRCC4Q13426 336 aa19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 SPARCL1Q14515 664 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms