RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 HELLSQ9NRZ9 838 aa4.79□□□□□ -1.64
PTCH1-216ENST00000548379 KCTD5Q9NXV2 234 aa4.79□□□□□ -1.64
PTCH1-216ENST00000548379 RIMKLBQ9ULI2 386 aa4.79□□□□□ -1.64
PTCH1-216ENST00000548379 ADGRL1O94910 1474 aa4.79□□□□□ -1.64
PTCH1-216ENST00000548379 RUSC2Q8N2Y8 1516 aa4.78□□□□□ -1.64
PTCH1-216ENST00000548379 VWC2LB2RUY7 222 aa4.78□□□□□ -1.64
PTCH1-216ENST00000548379 IPO5O00410 1097 aaKnown RBP4.78□□□□□ -1.64
PTCH1-216ENST00000548379 SLC16A3O15427 465 aaKnown RBP4.78□□□□□ -1.64
PTCH1-216ENST00000548379 PDHA1P08559 390 aa4.78□□□□□ -1.64
PTCH1-216ENST00000548379 DHRS4L1P0CG22 281 aa4.78□□□□□ -1.64
PTCH1-216ENST00000548379 HSD3B1P14060 373 aa4.78□□□□□ -1.64
PTCH1-216ENST00000548379 PRKAR1BP31321 381 aa4.78□□□□□ -1.64
PTCH1-216ENST00000548379 CCT5P48643 541 aa4.78□□□□□ -1.64
PTCH1-216ENST00000548379 POLE2P56282 527 aa4.78□□□□□ -1.64
PTCH1-216ENST00000548379 GPS1Q13098 491 aa4.78□□□□□ -1.64
PTCH1-216ENST00000548379 TUBA3CQ13748 450 aa4.78□□□□□ -1.64
PTCH1-216ENST00000548379 PTPRRQ15256 657 aa4.78□□□□□ -1.64
PTCH1-216ENST00000548379 TRIM60Q495X7 471 aa4.78□□□□□ -1.64
PTCH1-216ENST00000548379 DEPDC1Q5TB30 811 aa4.78□□□□□ -1.64
PTCH1-216ENST00000548379 SLC9A4Q6AI14 798 aa4.78□□□□□ -1.64
PTCH1-216ENST00000548379 TUBA3EQ6PEY2 450 aa4.78□□□□□ -1.64
PTCH1-216ENST00000548379 GATAD2AQ86YP4 633 aa4.78□□□□□ -1.64
PTCH1-216ENST00000548379 SMAP1Q8IYB5 467 aaPredicted RBP4.78□□□□□ -1.64
PTCH1-216ENST00000548379 SYNE4Q8N205 404 aa4.78□□□□□ -1.64
PTCH1-216ENST00000548379 B3GALNT2Q8NCR0 500 aa4.78□□□□□ -1.64
PTCH1-216ENST00000548379 PGBD1Q96JS3 809 aa4.78□□□□□ -1.64
PTCH1-216ENST00000548379 ZBTB45Q96K62 511 aaPredicted RBP4.78□□□□□ -1.64
PTCH1-216ENST00000548379 SCLT1Q96NL6 688 aa4.78□□□□□ -1.64
PTCH1-216ENST00000548379 HIST1H2AAQ96QV6 131 aa4.78□□□□□ -1.64
PTCH1-216ENST00000548379 NUDT22Q9BRQ3 303 aa4.78□□□□□ -1.64
PTCH1-216ENST00000548379 DDX23Q9BUQ8 820 aaKnown RBP4.78□□□□□ -1.64
PTCH1-216ENST00000548379 SORBS1Q9BX66 1292 aaKnown RBP4.78□□□□□ -1.64
PTCH1-216ENST00000548379 KRTAP4-9Q9BYQ8 210 aa4.78□□□□□ -1.64
PTCH1-216ENST00000548379 INO80BQ9C086 356 aaPredicted RBP4.78□□□□□ -1.64
PTCH1-216ENST00000548379 SERHL2Q9H4I8 314 aa4.78□□□□□ -1.64
PTCH1-216ENST00000548379 NRDE2Q9H7Z3 1164 aa4.78□□□□□ -1.64
PTCH1-216ENST00000548379 TBCCD1Q9NVR7 557 aa4.78□□□□□ -1.64
PTCH1-216ENST00000548379 HERC5Q9UII4 1024 aaKnown RBP4.78□□□□□ -1.64
PTCH1-216ENST00000548379 SH2B3Q9UQQ2 575 aa4.78□□□□□ -1.64
PTCH1-216ENST00000548379 SLC27A6Q9Y2P4 619 aa4.78□□□□□ -1.64
PTCH1-216ENST00000548379 UHRF1BP1LA0JNW5 1464 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 ADCY10Q96PN6 1610 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 BIVM-ERCC5R4GMW8 1640 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 A1L4Q6 167 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 CCNT2O60583 730 aaKnown RBP4.77□□□□□ -1.65
PTCH1-216ENST00000548379 FAM155BO75949 473 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 VIPP01282 170 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 RHOP08100 348 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 ANXA6P08133 673 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 RBL1P28749 1068 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 PCSK6P29122 969 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 NTSR1P30989 418 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 ZEB1P37275 1124 aaPredicted RBP4.77□□□□□ -1.65
PTCH1-216ENST00000548379 ARL4CP56559 192 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 BLOC1S1P78537 153 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 MTAPQ13126 283 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 PPFIA1Q13136 1202 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 PRKG1Q13976 671 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 ACOX1Q15067 660 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 HSP90AB4PQ58FF6 505 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 TEDDM1Q5T9Z0 273 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 RASGRP3Q8IV61 690 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 GALNT15Q8N3T1 639 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 ABHD5Q8WTS1 349 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 GLG1Q92896 1179 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 RFKQ969G6 155 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 FKBP10Q96AY3 582 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 GCC1Q96CN9 775 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 LTV1Q96GA3 475 aaPredicted RBP4.77□□□□□ -1.65
PTCH1-216ENST00000548379 HAPLN3Q96S86 360 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 MLST8Q9BVC4 326 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 ALG8Q9BVK2 526 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 FSCN3Q9NQT6 498 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 PRDM8Q9NQV8 689 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 SLC2A4RGQ9NR83 387 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 RXFP3Q9NSD7 469 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 KLC4Q9NSK0 619 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 SYBUQ9NX95 663 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 SAGE1Q9NXZ1 904 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 ANKFY1Q9P2R3 1169 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 LPAR3Q9UBY5 353 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 PGAP2Q9UHJ9 254 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 GABRQQ9UN88 632 aa4.77□□□□□ -1.65
PTCH1-216ENST00000548379 DRG1Q9Y295 367 aaKnown RBP4.77□□□□□ -1.65
PTCH1-216ENST00000548379 MAST3O60307 1309 aa4.76□□□□□ -1.65
PTCH1-216ENST00000548379 M0R3H8 397 aa4.76□□□□□ -1.65
PTCH1-216ENST00000548379 MPPED1O15442 326 aa4.76□□□□□ -1.65
PTCH1-216ENST00000548379 TJP3O95049 919 aa4.76□□□□□ -1.65
PTCH1-216ENST00000548379 VNN1O95497 513 aa4.76□□□□□ -1.65
PTCH1-216ENST00000548379 ITGA2BP08514 1039 aa4.76□□□□□ -1.65
PTCH1-216ENST00000548379 IL6RP08887 468 aaPredicted RBP4.76□□□□□ -1.65
PTCH1-216ENST00000548379 TGM1P22735 817 aa4.76□□□□□ -1.65
PTCH1-216ENST00000548379 FOLR3P41439 243 aa4.76□□□□□ -1.65
PTCH1-216ENST00000548379 PPM1FP49593 454 aaPredicted RBP4.76□□□□□ -1.65
PTCH1-216ENST00000548379 LY6G5CQ5SRR4 150 aa4.76□□□□□ -1.65
PTCH1-216ENST00000548379 ZNF618Q5T7W0 954 aa4.76□□□□□ -1.65
PTCH1-216ENST00000548379 KCNV1Q6PIU1 500 aa4.76□□□□□ -1.65
PTCH1-216ENST00000548379 RFX8Q6ZV50 586 aa4.76□□□□□ -1.65
PTCH1-216ENST00000548379 ZNF354CQ86Y25 554 aa4.76□□□□□ -1.65
PTCH1-216ENST00000548379 SLC44A2Q8IWA5 706 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms