RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 ABCB4P21439 1286 aa18.31■□□□□ 0.52
HDAC7-227ENST00000548080 GPC5P78333 572 aa18.31■□□□□ 0.52
HDAC7-227ENST00000548080 CYP4F8P98187 520 aa18.31■□□□□ 0.52
HDAC7-227ENST00000548080 IFRD2Q12894 506 aaPredicted RBP18.31■□□□□ 0.52
HDAC7-227ENST00000548080 SGO2Q562F6 1265 aa18.31■□□□□ 0.52
HDAC7-227ENST00000548080 STXBP5Q5T5C0 1151 aa18.31■□□□□ 0.52
HDAC7-227ENST00000548080 PPP1R26Q5T8A7 1209 aaPredicted RBP18.31■□□□□ 0.52
HDAC7-227ENST00000548080 CYP4A22Q5TCH4 519 aa18.31■□□□□ 0.52
HDAC7-227ENST00000548080 NAA35Q5VZE5 725 aa18.31■□□□□ 0.52
HDAC7-227ENST00000548080 PASD1Q8IV76 773 aa18.31■□□□□ 0.52
HDAC7-227ENST00000548080 SLC35F6Q8N357 371 aa18.31■□□□□ 0.52
HDAC7-227ENST00000548080 SHKBP1Q8TBC3 707 aa18.31■□□□□ 0.52
HDAC7-227ENST00000548080 LIMD1Q9UGP4 676 aa18.31■□□□□ 0.52
HDAC7-227ENST00000548080 SALL4Q9UJQ4 1053 aa18.31■□□□□ 0.52
HDAC7-227ENST00000548080 BUB1O43683 1085 aa18.3■□□□□ 0.52
HDAC7-227ENST00000548080 MOCS3O95396 460 aa18.3■□□□□ 0.52
HDAC7-227ENST00000548080 HMGA1P17096 107 aaKnown RBP18.3■□□□□ 0.52
HDAC7-227ENST00000548080 GABRR2P28476 465 aa18.3■□□□□ 0.52
HDAC7-227ENST00000548080 NSFP46459 744 aaKnown RBP18.3■□□□□ 0.52
HDAC7-227ENST00000548080 NAP1L1P55209 391 aaKnown RBP18.3■□□□□ 0.52
HDAC7-227ENST00000548080 USP46P62068 366 aa18.3■□□□□ 0.52
HDAC7-227ENST00000548080 NOMO3P69849 1222 aa18.3■□□□□ 0.52
HDAC7-227ENST00000548080 CENPCQ03188 943 aa18.3■□□□□ 0.52
HDAC7-227ENST00000548080 TEAD2Q15562 447 aa18.3■□□□□ 0.52
HDAC7-227ENST00000548080 CNGA2Q16280 664 aa18.3■□□□□ 0.52
HDAC7-227ENST00000548080 IFI16Q16666 785 aaKnown RBP18.3■□□□□ 0.52
HDAC7-227ENST00000548080 VSTM1Q6UX27 236 aa18.3■□□□□ 0.52
HDAC7-227ENST00000548080 GAREM2Q75VX8 874 aa18.3■□□□□ 0.52
HDAC7-227ENST00000548080 OTOP3Q7RTS5 596 aa18.3■□□□□ 0.52
HDAC7-227ENST00000548080 ITIH5Q86UX2 942 aa18.3■□□□□ 0.52
HDAC7-227ENST00000548080 NPAS3Q8IXF0 933 aa18.3■□□□□ 0.52
HDAC7-227ENST00000548080 TMEM35BQ8NCS4 154 aa18.3■□□□□ 0.52
HDAC7-227ENST00000548080 TRIM58Q8NG06 486 aa18.3■□□□□ 0.52
HDAC7-227ENST00000548080 CPA5Q8WXQ8 436 aa18.3■□□□□ 0.52
HDAC7-227ENST00000548080 FGF13Q92913 245 aa18.3■□□□□ 0.52
HDAC7-227ENST00000548080 KHSRPQ92945 711 aaKnown RBP eCLIP18.3■□□□□ 0.52
HDAC7-227ENST00000548080 ACSF2Q96CM8 615 aaPredicted RBP18.3■□□□□ 0.52
HDAC7-227ENST00000548080 SMOQ99835 787 aa18.3■□□□□ 0.52
HDAC7-227ENST00000548080 THAP2Q9H0W7 228 aa18.3■□□□□ 0.52
HDAC7-227ENST00000548080 ASB3Q9Y575 518 aa18.3■□□□□ 0.52
HDAC7-227ENST00000548080 NCANO14594 1321 aa18.3■□□□□ 0.52
HDAC7-227ENST00000548080 ZNF638Q14966 1978 aaKnown RBP18.29■□□□□ 0.52
HDAC7-227ENST00000548080 OBSL1O75147 1896 aa18.29■□□□□ 0.52
HDAC7-227ENST00000548080 FAM170AA1A519 330 aa18.29■□□□□ 0.52
HDAC7-227ENST00000548080 NOP2P46087 812 aaKnown RBP18.29■□□□□ 0.52
HDAC7-227ENST00000548080 MAP3K7CLP57077 242 aa18.29■□□□□ 0.52
HDAC7-227ENST00000548080 STILQ15468 1287 aa18.29■□□□□ 0.52
HDAC7-227ENST00000548080 ZMIZ2Q8NF64 920 aa18.29■□□□□ 0.52
HDAC7-227ENST00000548080 RSAD2Q8WXG1 361 aa18.29■□□□□ 0.52
HDAC7-227ENST00000548080 RFFLQ8WZ73 363 aa18.29■□□□□ 0.52
HDAC7-227ENST00000548080 SMARCD1Q96GM5 515 aa18.29■□□□□ 0.52
HDAC7-227ENST00000548080 ALS2CR12Q96Q35 445 aa18.29■□□□□ 0.52
HDAC7-227ENST00000548080 LHX5Q9H2C1 402 aa18.29■□□□□ 0.52
HDAC7-227ENST00000548080 IL21Q9HBE4 155 aa18.29■□□□□ 0.52
HDAC7-227ENST00000548080 CEP83Q9Y592 693 aa18.29■□□□□ 0.52
HDAC7-227ENST00000548080 O00370 1275 aa18.28■□□□□ 0.52
HDAC7-227ENST00000548080 TRIM66O15016 1216 aa18.28■□□□□ 0.52
HDAC7-227ENST00000548080 CSH1P0DML2 217 aa18.28■□□□□ 0.52
HDAC7-227ENST00000548080 CSH2P0DML3 217 aa18.28■□□□□ 0.52
HDAC7-227ENST00000548080 CDH5P33151 784 aaPredicted RBP18.28■□□□□ 0.52
HDAC7-227ENST00000548080 EPHA5P54756 1037 aa18.28■□□□□ 0.52
HDAC7-227ENST00000548080 TCEAL1Q15170 157 aa18.28■□□□□ 0.52
HDAC7-227ENST00000548080 DENND1BQ6P3S1 775 aa18.28■□□□□ 0.52
HDAC7-227ENST00000548080 RNF135Q8IUD6 432 aa18.28■□□□□ 0.52
HDAC7-227ENST00000548080 MCOLN2Q8IZK6 566 aa18.28■□□□□ 0.52
HDAC7-227ENST00000548080 ARHGEF26Q96DR7 871 aa18.28■□□□□ 0.52
HDAC7-227ENST00000548080 TRIM11Q96F44 468 aa18.28■□□□□ 0.52
HDAC7-227ENST00000548080 VCPIP1Q96JH7 1222 aa18.28■□□□□ 0.52
HDAC7-227ENST00000548080 ZSWIM3Q96MP5 696 aa18.28■□□□□ 0.52
HDAC7-227ENST00000548080 HNRNPABQ99729 332 aaKnown RBP18.28■□□□□ 0.52
HDAC7-227ENST00000548080 ATXN3LQ9H3M9 355 aa18.28■□□□□ 0.52
HDAC7-227ENST00000548080 SLITRK6Q9H5Y7 841 aa18.28■□□□□ 0.52
HDAC7-227ENST00000548080 CDH7Q9ULB5 785 aa18.28■□□□□ 0.52
HDAC7-227ENST00000548080 USTQ9Y2C2 406 aa18.28■□□□□ 0.52
HDAC7-227ENST00000548080 DENND4CQ5VZ89 1909 aa18.28■□□□□ 0.52
HDAC7-227ENST00000548080 FANCGO15287 622 aa18.27■□□□□ 0.52
HDAC7-227ENST00000548080 CYP1A2P05177 515 aa18.27■□□□□ 0.52
HDAC7-227ENST00000548080 FAM200BP0CF97 657 aa18.27■□□□□ 0.52
HDAC7-227ENST00000548080 MYBL1P10243 752 aa18.27■□□□□ 0.52
HDAC7-227ENST00000548080 LAMP2P13473 410 aa18.27■□□□□ 0.52
HDAC7-227ENST00000548080 GOLGA7BQ2TAP0 167 aa18.27■□□□□ 0.52
HDAC7-227ENST00000548080 LCLAT1Q6UWP7 414 aa18.27■□□□□ 0.52
HDAC7-227ENST00000548080 CLEC20AQ6ZU45 233 aa18.27■□□□□ 0.52
HDAC7-227ENST00000548080 GPRIN1Q7Z2K8 1008 aa18.27■□□□□ 0.52
HDAC7-227ENST00000548080 TMEM150AQ86TG1 271 aa18.27■□□□□ 0.52
HDAC7-227ENST00000548080 PHF13Q86YI8 300 aaPredicted RBP18.27■□□□□ 0.52
HDAC7-227ENST00000548080 RHOT2Q8IXI1 618 aa18.27■□□□□ 0.52
HDAC7-227ENST00000548080 SCAMP5Q8TAC9 235 aa18.27■□□□□ 0.52
HDAC7-227ENST00000548080 SLC35G2Q8TBE7 412 aa18.27■□□□□ 0.52
HDAC7-227ENST00000548080 ZNF653Q96CK0 615 aa18.27■□□□□ 0.52
HDAC7-227ENST00000548080 C8orf48Q96LL4 319 aa18.27■□□□□ 0.52
HDAC7-227ENST00000548080 SMOC2Q9H3U7 446 aa18.27■□□□□ 0.52
HDAC7-227ENST00000548080 DMAP1Q9NPF5 467 aaPredicted RBP18.27■□□□□ 0.52
HDAC7-227ENST00000548080 AVENQ9NQS1 362 aaPredicted RBP18.27■□□□□ 0.52
HDAC7-227ENST00000548080 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.27■□□□□ 0.52
HDAC7-227ENST00000548080 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.27■□□□□ 0.52
HDAC7-227ENST00000548080 CAPN6Q9Y6Q1 641 aa18.27■□□□□ 0.52
HDAC7-227ENST00000548080 PATJQ8NI35 1801 aa18.27■□□□□ 0.51
HDAC7-227ENST00000548080 CUL9Q8IWT3 2517 aa18.27■□□□□ 0.51
HDAC7-227ENST00000548080 CTAGE9A4FU28 777 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms