RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 PSMG2Q969U7 264 aa16.6■□□□□ 0.25
TRAFD1-203ENST00000547063 MYRFLQ96LU7 910 aa16.6■□□□□ 0.25
TRAFD1-203ENST00000547063 ZNF512Q96ME7 567 aaPredicted RBP16.6■□□□□ 0.25
TRAFD1-203ENST00000547063 NSUN3Q9H649 340 aaKnown RBP16.6■□□□□ 0.25
TRAFD1-203ENST00000547063 TLR8Q9NR97 1041 aaKnown RBP16.6■□□□□ 0.25
TRAFD1-203ENST00000547063 ABCC13Q9NSE7 274 aa16.6■□□□□ 0.25
TRAFD1-203ENST00000547063 STAP1Q9ULZ2 295 aa16.6■□□□□ 0.25
TRAFD1-203ENST00000547063 COG5Q9UP83 839 aa16.6■□□□□ 0.25
TRAFD1-203ENST00000547063 PAXBP1Q9Y5B6 917 aa16.6■□□□□ 0.25
TRAFD1-203ENST00000547063 TNRC18O15417 2968 aaPredicted RBP16.6■□□□□ 0.25
TRAFD1-203ENST00000547063 GREB1Q4ZG55 1949 aa16.59■□□□□ 0.25
TRAFD1-203ENST00000547063 CAPN9O14815 690 aa16.59■□□□□ 0.25
TRAFD1-203ENST00000547063 ZNF500O60304 480 aaPredicted RBP16.59■□□□□ 0.25
TRAFD1-203ENST00000547063 ZMYND10O75800 440 aa16.59■□□□□ 0.25
TRAFD1-203ENST00000547063 MOCS3O95396 460 aa16.59■□□□□ 0.25
TRAFD1-203ENST00000547063 ABL1P00519 1130 aa16.59■□□□□ 0.25
TRAFD1-203ENST00000547063 SPATA31D3P0C874 917 aa16.59■□□□□ 0.25
TRAFD1-203ENST00000547063 SRGAP2BP0DMP2 458 aa16.59■□□□□ 0.25
TRAFD1-203ENST00000547063 PDGFRAP16234 1089 aa16.59■□□□□ 0.25
TRAFD1-203ENST00000547063 GPD1P21695 349 aa16.59■□□□□ 0.25
TRAFD1-203ENST00000547063 SDC4P31431 198 aa16.59■□□□□ 0.25
TRAFD1-203ENST00000547063 RFC1P35251 1148 aaPredicted RBP16.59■□□□□ 0.25
TRAFD1-203ENST00000547063 MATKP42679 507 aa16.59■□□□□ 0.25
TRAFD1-203ENST00000547063 SLC1A1P43005 524 aa16.59■□□□□ 0.25
TRAFD1-203ENST00000547063 RNASE9P60153 205 aaKnown RBP16.59■□□□□ 0.25
TRAFD1-203ENST00000547063 RPL7AP62424 266 aaKnown RBP16.59■□□□□ 0.25
TRAFD1-203ENST00000547063 PABPC1LQ4VXU2 614 aaKnown RBP16.59■□□□□ 0.25
TRAFD1-203ENST00000547063 LLGL2Q6P1M3 1020 aa16.59■□□□□ 0.25
TRAFD1-203ENST00000547063 SPATA31D4Q6ZUB0 917 aa16.59■□□□□ 0.25
TRAFD1-203ENST00000547063 DAAM2Q86T65 1068 aa16.59■□□□□ 0.25
TRAFD1-203ENST00000547063 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.59■□□□□ 0.25
TRAFD1-203ENST00000547063 GPR152Q8TDT2 470 aa16.59■□□□□ 0.25
TRAFD1-203ENST00000547063 CLEC4CQ8WTT0 213 aa16.59■□□□□ 0.25
TRAFD1-203ENST00000547063 CDK5RAP1Q96SZ6 601 aaKnown RBP16.59■□□□□ 0.25
TRAFD1-203ENST00000547063 MAN1C1Q9NR34 630 aa16.59■□□□□ 0.25
TRAFD1-203ENST00000547063 ZDHHC7Q9NXF8 308 aa16.59■□□□□ 0.25
TRAFD1-203ENST00000547063 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.59■□□□□ 0.25
TRAFD1-203ENST00000547063 CHORDC1Q9UHD1 332 aaPredicted RBP16.59■□□□□ 0.25
TRAFD1-203ENST00000547063 SALL4Q9UJQ4 1053 aa16.59■□□□□ 0.25
TRAFD1-203ENST00000547063 C2CD4BA6NLJ0 364 aa16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 SPDYE4A6NLX3 237 aa16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 YJEFN3A6XGL0 299 aa16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 E7ENQ6 273 aa16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 DPYSL4O14531 572 aa16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 BUB1BO60566 1050 aaPredicted RBP16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 XYLBO75191 536 aa16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 RNF8O76064 485 aa16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 FGF19O95750 216 aa16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 POU2F2P09086 479 aa16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 RALAP11233 206 aa16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 MAN1A1P33908 653 aa16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 NOS2P35228 1153 aa16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 PTPN9P43378 593 aa16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 NRIP1P48552 1158 aa16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 ZNF143P52747 638 aaPredicted RBP16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 GNG11P61952 73 aa16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 YWHAGP61981 247 aaKnown RBP eCLIP16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 MESDQ14696 234 aa16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 ZNF569Q5MCW4 686 aa16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 BSPRYQ5W0U4 402 aa16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 BTBD8Q5XKL5 378 aa16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 NYAP1Q6ZVC0 841 aa16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 DNAJB7Q7Z6W7 309 aaPredicted RBP16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 TADA2BQ86TJ2 420 aa16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 RBM23Q86U06 439 aaKnown RBP16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 NIPA2Q8N8Q9 360 aa16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 CASP10Q92851 521 aa16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 SLC2A13Q96QE2 648 aa16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 CNPY3Q9BT09 278 aa16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 DDX23Q9BUQ8 820 aaKnown RBP16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 OLA1Q9NTK5 396 aaKnown RBP16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 DZANK1Q9NVP4 752 aa16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 CLIC5Q9NZA1 410 aa16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 MAGED2Q9UNF1 606 aaPredicted RBP16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 HCFC2Q9Y5Z7 792 aa16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 MYO16Q9Y6X6 1858 aa16.58■□□□□ 0.24
TRAFD1-203ENST00000547063 ZNF638Q14966 1978 aaKnown RBP16.57■□□□□ 0.24
TRAFD1-203ENST00000547063 RFXAPO00287 272 aa16.57■□□□□ 0.24
TRAFD1-203ENST00000547063 PER2O15055 1255 aa16.57■□□□□ 0.24
TRAFD1-203ENST00000547063 PALMO75781 387 aa16.57■□□□□ 0.24
TRAFD1-203ENST00000547063 GRAP2O75791 330 aa16.57■□□□□ 0.24
TRAFD1-203ENST00000547063 PROSCO94903 275 aa16.57■□□□□ 0.24
TRAFD1-203ENST00000547063 EPCAMP16422 314 aa16.57■□□□□ 0.24
TRAFD1-203ENST00000547063 PSMA2P25787 234 aa16.57■□□□□ 0.24
TRAFD1-203ENST00000547063 USP46P62068 366 aa16.57■□□□□ 0.24
TRAFD1-203ENST00000547063 ETF1P62495 437 aaKnown RBP16.57■□□□□ 0.24
TRAFD1-203ENST00000547063 TAF10Q12962 218 aa16.57■□□□□ 0.24
TRAFD1-203ENST00000547063 ZNF697Q5TEC3 545 aa16.57■□□□□ 0.24
TRAFD1-203ENST00000547063 SLFN11Q7Z7L1 901 aa16.57■□□□□ 0.24
TRAFD1-203ENST00000547063 ADGRD2Q7Z7M1 963 aa16.57■□□□□ 0.24
TRAFD1-203ENST00000547063 LRRC57Q8N9N7 239 aa16.57■□□□□ 0.24
TRAFD1-203ENST00000547063 LEMD2Q8NC56 503 aa16.57■□□□□ 0.24
TRAFD1-203ENST00000547063 STKLD1Q8NE28 680 aa16.57■□□□□ 0.24
TRAFD1-203ENST00000547063 JOSD2Q8TAC2 188 aa16.57■□□□□ 0.24
TRAFD1-203ENST00000547063 RXFP2Q8WXD0 754 aa16.57■□□□□ 0.24
TRAFD1-203ENST00000547063 KHSRPQ92945 711 aaKnown RBP eCLIP16.57■□□□□ 0.24
TRAFD1-203ENST00000547063 PIWIL1Q96J94 861 aaKnown RBP16.57■□□□□ 0.24
TRAFD1-203ENST00000547063 TRPM5Q9NZQ8 1165 aa16.57■□□□□ 0.24
TRAFD1-203ENST00000547063 JRKLQ9Y4A0 524 aa16.57■□□□□ 0.24
TRAFD1-203ENST00000547063 CAPN6Q9Y6Q1 641 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms