RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 NT5C1AQ9BXI3 368 aa15.21■□□□□ 0.03
COL2A1-209ENST00000546974 DNAI2Q9GZS0 605 aa15.21■□□□□ 0.03
COL2A1-209ENST00000546974 NIF3L1Q9GZT8 377 aa15.21■□□□□ 0.03
COL2A1-209ENST00000546974 CCSER2Q9H7U1 834 aa15.21■□□□□ 0.03
COL2A1-209ENST00000546974 APOBEC3GQ9HC16 384 aaKnown RBP15.21■□□□□ 0.03
COL2A1-209ENST00000546974 GDPD2Q9HCC8 539 aa15.21■□□□□ 0.03
COL2A1-209ENST00000546974 TLR8Q9NR97 1041 aaKnown RBP15.21■□□□□ 0.03
COL2A1-209ENST00000546974 FAM49BQ9NUQ9 324 aa15.21■□□□□ 0.03
COL2A1-209ENST00000546974 SH3BP1Q9Y3L3 701 aa15.21■□□□□ 0.03
COL2A1-209ENST00000546974 NCOR2Q9Y618 2525 aa15.2■□□□□ 0.02
COL2A1-209ENST00000546974 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.2■□□□□ 0.02
COL2A1-209ENST00000546974 SCAMP3O14828 347 aaKnown RBP15.2■□□□□ 0.02
COL2A1-209ENST00000546974 APODP05090 189 aa15.2■□□□□ 0.02
COL2A1-209ENST00000546974 ADH5P11766 374 aa15.2■□□□□ 0.02
COL2A1-209ENST00000546974 ADORA2BP29275 332 aa15.2■□□□□ 0.02
COL2A1-209ENST00000546974 SLC6A11P48066 632 aa15.2■□□□□ 0.02
COL2A1-209ENST00000546974 SEC13P55735 322 aa15.2■□□□□ 0.02
COL2A1-209ENST00000546974 GAD2Q05329 585 aa15.2■□□□□ 0.02
COL2A1-209ENST00000546974 C2orf27AQ580R0 203 aa15.2■□□□□ 0.02
COL2A1-209ENST00000546974 KRT39Q6A163 491 aa15.2■□□□□ 0.02
COL2A1-209ENST00000546974 CLEC20AQ6ZU45 233 aa15.2■□□□□ 0.02
COL2A1-209ENST00000546974 TSTD1Q8NFU3 115 aa15.2■□□□□ 0.02
COL2A1-209ENST00000546974 CYFIP2Q96F07 1278 aa15.2■□□□□ 0.02
COL2A1-209ENST00000546974 ARRDC1-AS1Q9H2J1 176 aa15.2■□□□□ 0.02
COL2A1-209ENST00000546974 PNPLA8Q9NP80 782 aa15.2■□□□□ 0.02
COL2A1-209ENST00000546974 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.2■□□□□ 0.02
COL2A1-209ENST00000546974 MMP17Q9ULZ9 603 aa15.2■□□□□ 0.02
COL2A1-209ENST00000546974 SCML2Q9UQR0 700 aa15.2■□□□□ 0.02
COL2A1-209ENST00000546974 PCDHGA5Q9Y5G8 931 aa15.2■□□□□ 0.02
COL2A1-209ENST00000546974 THADAQ6YHU6 1953 aa15.19■□□□□ 0.02
COL2A1-209ENST00000546974 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.19■□□□□ 0.02
COL2A1-209ENST00000546974 HHLA1C9JL84 531 aa15.19■□□□□ 0.02
COL2A1-209ENST00000546974 SLC30A4O14863 429 aa15.19■□□□□ 0.02
COL2A1-209ENST00000546974 CETN3O15182 167 aa15.19■□□□□ 0.02
COL2A1-209ENST00000546974 TLR5O60602 858 aa15.19■□□□□ 0.02
COL2A1-209ENST00000546974 CILPO75339 1184 aa15.19■□□□□ 0.02
COL2A1-209ENST00000546974 KAT7O95251 611 aa15.19■□□□□ 0.02
COL2A1-209ENST00000546974 ZNF806P0C7X5 589 aa15.19■□□□□ 0.02
COL2A1-209ENST00000546974 GRIA2P42262 883 aa15.19■□□□□ 0.02
COL2A1-209ENST00000546974 TNFRSF4P43489 277 aa15.19■□□□□ 0.02
COL2A1-209ENST00000546974 PGFP49763 221 aa15.19■□□□□ 0.02
COL2A1-209ENST00000546974 PLK5Q496M5 336 aa15.19■□□□□ 0.02
COL2A1-209ENST00000546974 HSF5Q4G112 596 aaPredicted RBP15.19■□□□□ 0.02
COL2A1-209ENST00000546974 LY6G5CQ5SRR4 150 aa15.19■□□□□ 0.02
COL2A1-209ENST00000546974 C12orf40Q86WS4 652 aa15.19■□□□□ 0.02
COL2A1-209ENST00000546974 FMR1NBQ8N0W7 255 aaPredicted RBP15.19■□□□□ 0.02
COL2A1-209ENST00000546974 WHAMMQ8TF30 809 aa15.19■□□□□ 0.02
COL2A1-209ENST00000546974 NACA2Q9H009 215 aa15.19■□□□□ 0.02
COL2A1-209ENST00000546974 MMRN2Q9H8L6 949 aa15.19■□□□□ 0.02
COL2A1-209ENST00000546974 RMND1Q9NWS8 449 aa15.19■□□□□ 0.02
COL2A1-209ENST00000546974 PCDHA5Q9Y5H7 936 aa15.19■□□□□ 0.02
COL2A1-209ENST00000546974 NUP205Q92621 2012 aa15.19■□□□□ 0.02
COL2A1-209ENST00000546974 CNOT1A5YKK6 2376 aaKnown RBP15.18■□□□□ 0.02
COL2A1-209ENST00000546974 HOXC11O43248 304 aaPredicted RBP15.18■□□□□ 0.02
COL2A1-209ENST00000546974 STX10O60499 249 aa15.18■□□□□ 0.02
COL2A1-209ENST00000546974 RHOBTB1O94844 696 aa15.18■□□□□ 0.02
COL2A1-209ENST00000546974 EPB41P11171 864 aaKnown RBP15.18■□□□□ 0.02
COL2A1-209ENST00000546974 CD58P19256 250 aa15.18■□□□□ 0.02
COL2A1-209ENST00000546974 DGKEP52429 567 aa15.18■□□□□ 0.02
COL2A1-209ENST00000546974 PNOCQ13519 176 aa15.18■□□□□ 0.02
COL2A1-209ENST00000546974 PREPLQ4J6C6 727 aaPredicted RBP15.18■□□□□ 0.02
COL2A1-209ENST00000546974 COBLL1Q53SF7 1204 aa15.18■□□□□ 0.02
COL2A1-209ENST00000546974 HTR3DQ70Z44 454 aa15.18■□□□□ 0.02
COL2A1-209ENST00000546974 GPRIN1Q7Z2K8 1008 aa15.18■□□□□ 0.02
COL2A1-209ENST00000546974 C11orf74Q86VG3 221 aa15.18■□□□□ 0.02
COL2A1-209ENST00000546974 RASSF3Q86WH2 238 aa15.18■□□□□ 0.02
COL2A1-209ENST00000546974 BBS7Q8IWZ6 715 aa15.18■□□□□ 0.02
COL2A1-209ENST00000546974 SMYD4Q8IYR2 804 aaPredicted RBP15.18■□□□□ 0.02
COL2A1-209ENST00000546974 TTC39CQ8N584 583 aa15.18■□□□□ 0.02
COL2A1-209ENST00000546974 KLF16Q9BXK1 252 aaPredicted RBP15.18■□□□□ 0.02
COL2A1-209ENST00000546974 DUSP15Q9H1R2 295 aaPredicted RBP15.18■□□□□ 0.02
COL2A1-209ENST00000546974 CYLDQ9NQC7 956 aa15.18■□□□□ 0.02
COL2A1-209ENST00000546974 ARHGEF4Q9NR80 690 aa15.18■□□□□ 0.02
COL2A1-209ENST00000546974 SPHK2Q9NRA0 654 aa15.18■□□□□ 0.02
COL2A1-209ENST00000546974 DCDC2BA2VCK2 349 aa15.17■□□□□ 0.02
COL2A1-209ENST00000546974 GOLGA6L4A6NEF3 574 aa15.17■□□□□ 0.02
COL2A1-209ENST00000546974 ANTXRLA6NF34 631 aa15.17■□□□□ 0.02
COL2A1-209ENST00000546974 GDF9O60383 454 aa15.17■□□□□ 0.02
COL2A1-209ENST00000546974 TBX18O95935 607 aa15.17■□□□□ 0.02
COL2A1-209ENST00000546974 IRF1P10914 325 aa15.17■□□□□ 0.02
COL2A1-209ENST00000546974 CHRM1P11229 460 aaPredicted RBP15.17■□□□□ 0.02
COL2A1-209ENST00000546974 ACO1P21399 889 aaKnown RBP15.17■□□□□ 0.02
COL2A1-209ENST00000546974 TIE1P35590 1138 aa15.17■□□□□ 0.02
COL2A1-209ENST00000546974 ATP5C1P36542 298 aaKnown RBP15.17■□□□□ 0.02
COL2A1-209ENST00000546974 PRCPP42785 496 aa15.17■□□□□ 0.02
COL2A1-209ENST00000546974 MXI1P50539 228 aa15.17■□□□□ 0.02
COL2A1-209ENST00000546974 KIF11P52732 1056 aa15.17■□□□□ 0.02
COL2A1-209ENST00000546974 LIMK1P53667 647 aa15.17■□□□□ 0.02
COL2A1-209ENST00000546974 MESP2Q0VG99 397 aa15.17■□□□□ 0.02
COL2A1-209ENST00000546974 BECN1Q14457 450 aa15.17■□□□□ 0.02
COL2A1-209ENST00000546974 ELF2Q15723 593 aa15.17■□□□□ 0.02
COL2A1-209ENST00000546974 CRY1Q16526 586 aa15.17■□□□□ 0.02
COL2A1-209ENST00000546974 USP39Q53GS9 565 aaKnown RBP15.17■□□□□ 0.02
COL2A1-209ENST00000546974 PLA2G2CQ5R387 149 aa15.17■□□□□ 0.02
COL2A1-209ENST00000546974 PPP1R26Q5T8A7 1209 aaPredicted RBP15.17■□□□□ 0.02
COL2A1-209ENST00000546974 ZNF658Q5TYW1 1059 aaPredicted RBP15.17■□□□□ 0.02
COL2A1-209ENST00000546974 BTBD8Q5XKL5 378 aa15.17■□□□□ 0.02
COL2A1-209ENST00000546974 KLHDC10Q6PID8 442 aa15.17■□□□□ 0.02
COL2A1-209ENST00000546974 SFTPA1Q8IWL2 248 aa15.17■□□□□ 0.02
COL2A1-209ENST00000546974 ETFBKMTQ8IXQ9 262 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms