RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 KLRC2P26717 231 aa15.25■□□□□ 0.03
HOXC11-202ENST00000546378 PKNOX1P55347 436 aa15.25■□□□□ 0.03
HOXC11-202ENST00000546378 GTF2BQ00403 316 aa15.25■□□□□ 0.03
HOXC11-202ENST00000546378 CAV1Q03135 178 aa15.25■□□□□ 0.03
HOXC11-202ENST00000546378 ZNF699Q32M78 642 aa15.25■□□□□ 0.03
HOXC11-202ENST00000546378 MON1BQ7L1V2 547 aa15.25■□□□□ 0.03
HOXC11-202ENST00000546378 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.25■□□□□ 0.03
HOXC11-202ENST00000546378 ALLCQ8N6M5 410 aa15.25■□□□□ 0.03
HOXC11-202ENST00000546378 GSDMBQ8TAX9 411 aa15.25■□□□□ 0.03
HOXC11-202ENST00000546378 ZSCAN18Q8TBC5 510 aaPredicted RBP15.25■□□□□ 0.03
HOXC11-202ENST00000546378 E2F7Q96AV8 911 aa15.25■□□□□ 0.03
HOXC11-202ENST00000546378 DNAJC16Q9Y2G8 782 aa15.25■□□□□ 0.03
HOXC11-202ENST00000546378 IRF6O14896 467 aa15.24■□□□□ 0.03
HOXC11-202ENST00000546378 PFDN1O60925 122 aa15.24■□□□□ 0.03
HOXC11-202ENST00000546378 MAPK10P53779 464 aa15.24■□□□□ 0.03
HOXC11-202ENST00000546378 MMEL1Q495T6 779 aa15.24■□□□□ 0.03
HOXC11-202ENST00000546378 HPS6Q86YV9 775 aa15.24■□□□□ 0.03
HOXC11-202ENST00000546378 MPP5Q8N3R9 675 aa15.24■□□□□ 0.03
HOXC11-202ENST00000546378 SPATA6LQ8N4H0 392 aa15.24■□□□□ 0.03
HOXC11-202ENST00000546378 BHMG1C9JSJ3 638 aaPredicted RBP15.24■□□□□ 0.03
HOXC11-202ENST00000546378 VWA5AO00534 786 aa15.24■□□□□ 0.03
HOXC11-202ENST00000546378 VNN1O95497 513 aa15.24■□□□□ 0.03
HOXC11-202ENST00000546378 NR3C2P08235 984 aa15.24■□□□□ 0.03
HOXC11-202ENST00000546378 SPATA31D3P0C874 917 aa15.24■□□□□ 0.03
HOXC11-202ENST00000546378 SLC1A1P43005 524 aa15.24■□□□□ 0.03
HOXC11-202ENST00000546378 GLRBP48167 497 aa15.24■□□□□ 0.03
HOXC11-202ENST00000546378 RTP1P59025 263 aa15.24■□□□□ 0.03
HOXC11-202ENST00000546378 ZNF252P-AS1Q0IIN9 211 aa15.24■□□□□ 0.03
HOXC11-202ENST00000546378 RNASEH2BQ5TBB1 312 aaKnown RBP15.24■□□□□ 0.03
HOXC11-202ENST00000546378 FOXB2Q5VYV0 432 aa15.24■□□□□ 0.03
HOXC11-202ENST00000546378 SPATA31D4Q6ZUB0 917 aa15.24■□□□□ 0.03
HOXC11-202ENST00000546378 CRLF3Q8IUI8 442 aa15.24■□□□□ 0.03
HOXC11-202ENST00000546378 C12orf29Q8N999 325 aa15.24■□□□□ 0.03
HOXC11-202ENST00000546378 TMEM35BQ8NCS4 154 aa15.24■□□□□ 0.03
HOXC11-202ENST00000546378 EXD1Q8NHP7 514 aa15.24■□□□□ 0.03
HOXC11-202ENST00000546378 RAB3IL1Q8TBN0 382 aa15.24■□□□□ 0.03
HOXC11-202ENST00000546378 SLC7A3Q8WY07 619 aa15.24■□□□□ 0.03
HOXC11-202ENST00000546378 SGF29Q96ES7 293 aa15.24■□□□□ 0.03
HOXC11-202ENST00000546378 PIWIL1Q96J94 861 aaKnown RBP15.24■□□□□ 0.03
HOXC11-202ENST00000546378 ZNF184Q99676 751 aaPredicted RBP15.24■□□□□ 0.03
HOXC11-202ENST00000546378 TMEM109Q9BVC6 243 aa15.24■□□□□ 0.03
HOXC11-202ENST00000546378 DHX35Q9H5Z1 703 aaKnown RBP15.24■□□□□ 0.03
HOXC11-202ENST00000546378 XPNPEP1Q9NQW7 623 aa15.24■□□□□ 0.03
HOXC11-202ENST00000546378 HMGXB4Q9UGU5 601 aa15.24■□□□□ 0.03
HOXC11-202ENST00000546378 IQANK1A0A1B0GTG1 560 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 DCXO43602 365 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 ATP5HO75947 161 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 ALADP13716 330 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 PEX2P28328 305 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 RBL1P28749 1068 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 GPC3P51654 580 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 CENPCQ03188 943 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 SATL1Q86VE3 508 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 RCOR2Q8IZ40 523 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 NME8Q8N427 588 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 RNF149Q8NC42 400 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 PRPF31Q8WWY3 499 aaKnown RBP15.23■□□□□ 0.03
HOXC11-202ENST00000546378 C20orf27Q9GZN8 174 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 TXNDC16Q9P2K2 825 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 A0A0B4J269 797 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 DHX15O43143 795 aaKnown RBP15.23■□□□□ 0.03
HOXC11-202ENST00000546378 ADCY3O60266 1144 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 CD1EP15812 388 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 RABGGTBP53611 331 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 CDK16Q00536 496 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 TREML2Q5T2D2 321 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 LAYNQ6UX15 382 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 NCAPG2Q86XI2 1143 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 IWS1Q96ST2 819 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 ADPGKQ9BRR6 497 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 SLC38A10Q9HBR0 1119 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 ETNK2Q9NVF9 386 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 PNPOQ9NVS9 261 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 HEMK1Q9Y5R4 338 aaPredicted RBP15.23■□□□□ 0.03
HOXC11-202ENST00000546378 CNTNAP2Q9UHC6 1331 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 hCG_1818297A0A087WSY0 165 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 XPO1O14980 1071 aaKnown RBP15.23■□□□□ 0.03
HOXC11-202ENST00000546378 RFX1P22670 979 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 MAP3K10Q02779 954 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 KLF1Q13351 362 aaPredicted RBP15.23■□□□□ 0.03
HOXC11-202ENST00000546378 PGM5Q15124 567 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 PPIL6Q8IXY8 311 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 KIAA0319LQ8IZA0 1049 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 DEFB107AQ8IZN7 70 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 LRRC43Q8N309 656 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 PNPLA1Q8N8W4 532 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 AZIN2Q96A70 460 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 ETAA1Q9NY74 926 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 UBP1Q9NZI7 540 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 LRCH1Q9Y2L9 728 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 SCINQ9Y6U3 715 aa15.23■□□□□ 0.03
HOXC11-202ENST00000546378 CAPN8A6NHC0 703 aa15.22■□□□□ 0.03
HOXC11-202ENST00000546378 HNRNPRO43390 633 aaKnown RBP15.22■□□□□ 0.03
HOXC11-202ENST00000546378 ITM2AO43736 263 aa15.22■□□□□ 0.03
HOXC11-202ENST00000546378 ROR1Q01973 937 aa15.22■□□□□ 0.03
HOXC11-202ENST00000546378 CNTN2Q02246 1040 aa15.22■□□□□ 0.03
HOXC11-202ENST00000546378 LMNB2Q03252 620 aa15.22■□□□□ 0.03
HOXC11-202ENST00000546378 HADHQ16836 314 aaKnown RBP15.22■□□□□ 0.03
HOXC11-202ENST00000546378 PCGF5Q86SE9 256 aa15.22■□□□□ 0.03
HOXC11-202ENST00000546378 TMEM192Q8IY95 271 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms