RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 BACE2Q9Y5Z0 518 aa20.33■□□□□ 0.84
SKP2-208ENST00000546211 USP3Q9Y6I4 520 aa20.33■□□□□ 0.84
SKP2-208ENST00000546211 ALPK3Q96L96 1907 aa20.33■□□□□ 0.84
SKP2-208ENST00000546211 YJEFN3A6XGL0 299 aa20.32■□□□□ 0.84
SKP2-208ENST00000546211 E7ENQ6 273 aa20.32■□□□□ 0.84
SKP2-208ENST00000546211 GJB5O95377 273 aa20.32■□□□□ 0.84
SKP2-208ENST00000546211 LTFP02788 710 aa20.32■□□□□ 0.84
SKP2-208ENST00000546211 RALAP11233 206 aa20.32■□□□□ 0.84
SKP2-208ENST00000546211 PPM1AP35813 382 aa20.32■□□□□ 0.84
SKP2-208ENST00000546211 SULT1E1P49888 294 aa20.32■□□□□ 0.84
SKP2-208ENST00000546211 SLC5A3P53794 718 aa20.32■□□□□ 0.84
SKP2-208ENST00000546211 BOLA3Q53S33 107 aa20.32■□□□□ 0.84
SKP2-208ENST00000546211 TMEM240Q5SV17 173 aa20.32■□□□□ 0.84
SKP2-208ENST00000546211 SPOCD1Q6ZMY3 1216 aa20.32■□□□□ 0.84
SKP2-208ENST00000546211 STRADAQ7RTN6 431 aa20.32■□□□□ 0.84
SKP2-208ENST00000546211 FBXO22Q8NEZ5 403 aa20.32■□□□□ 0.84
SKP2-208ENST00000546211 ANKRD7Q92527 254 aa20.32■□□□□ 0.84
SKP2-208ENST00000546211 HSPH1Q92598 858 aa20.32■□□□□ 0.84
SKP2-208ENST00000546211 ACSF2Q96CM8 615 aaPredicted RBP20.32■□□□□ 0.84
SKP2-208ENST00000546211 C11orf84Q9BUA3 381 aaPredicted RBP20.32■□□□□ 0.84
SKP2-208ENST00000546211 TRIM62Q9BVG3 475 aa20.32■□□□□ 0.84
SKP2-208ENST00000546211 HERC2P3Q9BVR0 1158 aa20.32■□□□□ 0.84
SKP2-208ENST00000546211 VN1R3Q9BXE9 311 aa20.32■□□□□ 0.84
SKP2-208ENST00000546211 DDX47Q9H0S4 455 aaKnown RBP20.32■□□□□ 0.84
SKP2-208ENST00000546211 SLITRK6Q9H5Y7 841 aa20.32■□□□□ 0.84
SKP2-208ENST00000546211 CHST7Q9NS84 486 aa20.32■□□□□ 0.84
SKP2-208ENST00000546211 CDY1Q9Y6F8 540 aa20.32■□□□□ 0.84
SKP2-208ENST00000546211 PTPRDP23468 1912 aa20.32■□□□□ 0.84
SKP2-208ENST00000546211 MTMR11A4FU01 709 aa20.31■□□□□ 0.84
SKP2-208ENST00000546211 RARAP10276 462 aa20.31■□□□□ 0.84
SKP2-208ENST00000546211 MCM3P25205 808 aa20.31■□□□□ 0.84
SKP2-208ENST00000546211 PTPN7P35236 360 aa20.31■□□□□ 0.84
SKP2-208ENST00000546211 LLGL1Q15334 1064 aa20.31■□□□□ 0.84
SKP2-208ENST00000546211 MFSD7Q6UXD7 560 aa20.31■□□□□ 0.84
SKP2-208ENST00000546211 RSPO2Q6UXX9 243 aaPredicted RBP20.31■□□□□ 0.84
SKP2-208ENST00000546211 HFE2Q6ZVN8 426 aa20.31■□□□□ 0.84
SKP2-208ENST00000546211 FIBCD1Q8N539 461 aa20.31■□□□□ 0.84
SKP2-208ENST00000546211 ATAD1Q8NBU5 361 aa20.31■□□□□ 0.84
SKP2-208ENST00000546211 KCTD6Q8NC69 237 aa20.31■□□□□ 0.84
SKP2-208ENST00000546211 CCDC26Q8TAB7 109 aa20.31■□□□□ 0.84
SKP2-208ENST00000546211 RAPGEF5Q92565 580 aa20.31■□□□□ 0.84
SKP2-208ENST00000546211 TBCBQ99426 244 aa20.31■□□□□ 0.84
SKP2-208ENST00000546211 HEMGNQ9BXL5 484 aa20.31■□□□□ 0.84
SKP2-208ENST00000546211 ARGLU1Q9NWB6 273 aaPredicted RBP20.31■□□□□ 0.84
SKP2-208ENST00000546211 NR2E1Q9Y466 385 aa20.31■□□□□ 0.84
SKP2-208ENST00000546211 PCDHB12Q9Y5F1 795 aa20.31■□□□□ 0.84
SKP2-208ENST00000546211 TCRBV7S2A1N4TA0A589 114 aa20.3■□□□□ 0.84
SKP2-208ENST00000546211 TNFRSF10BO14763 440 aa20.3■□□□□ 0.84
SKP2-208ENST00000546211 PHF2O75151 1096 aa20.3■□□□□ 0.84
SKP2-208ENST00000546211 SYN1P17600 705 aa20.3■□□□□ 0.84
SKP2-208ENST00000546211 KDELR1P24390 212 aa20.3■□□□□ 0.84
SKP2-208ENST00000546211 GLUD2P49448 558 aa20.3■□□□□ 0.84
SKP2-208ENST00000546211 EPHB4P54760 987 aa20.3■□□□□ 0.84
SKP2-208ENST00000546211 HDAC4P56524 1084 aa20.3■□□□□ 0.84
SKP2-208ENST00000546211 HTRA4P83105 476 aaPredicted RBP20.3■□□□□ 0.84
SKP2-208ENST00000546211 RAB6CQ53S08 254 aa20.3■□□□□ 0.84
SKP2-208ENST00000546211 TFDP3Q5H9I0 405 aa20.3■□□□□ 0.84
SKP2-208ENST00000546211 SLC8B1Q6J4K2 584 aa20.3■□□□□ 0.84
SKP2-208ENST00000546211 RNF19BQ6ZMZ0 732 aa20.3■□□□□ 0.84
SKP2-208ENST00000546211 NUP93Q8N1F7 819 aa20.3■□□□□ 0.84
SKP2-208ENST00000546211 CMASQ8NFW8 434 aaPredicted RBP20.3■□□□□ 0.84
SKP2-208ENST00000546211 TEKT4Q8WW24 435 aa20.3■□□□□ 0.84
SKP2-208ENST00000546211 PEBP4Q96S96 227 aa20.3■□□□□ 0.84
SKP2-208ENST00000546211 RAB6CQ9H0N0 254 aa20.3■□□□□ 0.84
SKP2-208ENST00000546211 RRN3Q9NYV6 651 aa20.3■□□□□ 0.84
SKP2-208ENST00000546211 INSL6Q9Y581 213 aa20.3■□□□□ 0.84
SKP2-208ENST00000546211 C2CD2LO14523 706 aa20.29■□□□□ 0.84
SKP2-208ENST00000546211 TJP3O95049 919 aa20.29■□□□□ 0.84
SKP2-208ENST00000546211 NCAM1P13591 858 aa20.29■□□□□ 0.84
SKP2-208ENST00000546211 TFE3P19532 575 aaPredicted RBP20.29■□□□□ 0.84
SKP2-208ENST00000546211 CHRNA3P32297 505 aa20.29■□□□□ 0.84
SKP2-208ENST00000546211 DSG1Q02413 1049 aa20.29■□□□□ 0.84
SKP2-208ENST00000546211 IFRD2Q12894 506 aaPredicted RBP20.29■□□□□ 0.84
SKP2-208ENST00000546211 DDR2Q16832 855 aa20.29■□□□□ 0.84
SKP2-208ENST00000546211 BHLHA9Q7RTU4 235 aa20.29■□□□□ 0.84
SKP2-208ENST00000546211 MAATS1Q7Z4T9 603 aa20.29■□□□□ 0.84
SKP2-208ENST00000546211 DDX53Q86TM3 631 aaKnown RBP20.29■□□□□ 0.84
SKP2-208ENST00000546211 PRELID2Q8N945 189 aa20.29■□□□□ 0.84
SKP2-208ENST00000546211 SCAMP5Q8TAC9 235 aa20.29■□□□□ 0.84
SKP2-208ENST00000546211 RUBCNQ92622 972 aa20.29■□□□□ 0.84
SKP2-208ENST00000546211 NT5C3BQ969T7 300 aa20.29■□□□□ 0.84
SKP2-208ENST00000546211 MAGOHBQ96A72 148 aaKnown RBP20.29■□□□□ 0.84
SKP2-208ENST00000546211 RUNDC3BQ96NL0 473 aa20.29■□□□□ 0.84
SKP2-208ENST00000546211 PNKPQ96T60 521 aa20.29■□□□□ 0.84
SKP2-208ENST00000546211 NPY6RQ99463 290 aa20.29■□□□□ 0.84
SKP2-208ENST00000546211 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.29■□□□□ 0.84
SKP2-208ENST00000546211 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.29■□□□□ 0.84
SKP2-208ENST00000546211 CXXC1Q9P0U4 656 aaPredicted RBP20.29■□□□□ 0.84
SKP2-208ENST00000546211 STK39Q9UEW8 545 aa20.29■□□□□ 0.84
SKP2-208ENST00000546211 NAALADL1Q9UQQ1 740 aa20.29■□□□□ 0.84
SKP2-208ENST00000546211 PATJQ8NI35 1801 aa20.29■□□□□ 0.84
SKP2-208ENST00000546211 hCG_1818297A0A087WSY0 165 aa20.29■□□□□ 0.84
SKP2-208ENST00000546211 RAD51CO43502 376 aa20.29■□□□□ 0.84
SKP2-208ENST00000546211 URODP06132 367 aa20.29■□□□□ 0.84
SKP2-208ENST00000546211 CDKN2BP42772 138 aa20.29■□□□□ 0.84
SKP2-208ENST00000546211 ROR1Q01973 937 aa20.29■□□□□ 0.84
SKP2-208ENST00000546211 KLF1Q13351 362 aaPredicted RBP20.29■□□□□ 0.84
SKP2-208ENST00000546211 SIX1Q15475 284 aaPredicted RBP20.29■□□□□ 0.84
SKP2-208ENST00000546211 MGAT5BQ3V5L5 792 aa20.29■□□□□ 0.84
SKP2-208ENST00000546211 SYPL2Q5VXT5 272 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms