RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 SEMA4GQ9NTN9 838 aa24.03■■□□□ 1.44
CHD4-214ENST00000545942 K7EQS6 105 aa24.02■■□□□ 1.44
CHD4-214ENST00000545942 AXIN1O15169 862 aa24.02■■□□□ 1.44
CHD4-214ENST00000545942 TLR5O60602 858 aa24.02■■□□□ 1.44
CHD4-214ENST00000545942 SMC2O95347 1197 aa24.02■■□□□ 1.44
CHD4-214ENST00000545942 APBB3O95704 486 aa24.02■■□□□ 1.44
CHD4-214ENST00000545942 CSRP2Q16527 193 aa24.02■■□□□ 1.44
CHD4-214ENST00000545942 FBXL13Q8NEE6 735 aa24.02■■□□□ 1.44
CHD4-214ENST00000545942 ENGASEQ8NFI3 743 aa24.02■■□□□ 1.44
CHD4-214ENST00000545942 PNKPQ96T60 521 aa24.02■■□□□ 1.44
CHD4-214ENST00000545942 TSG101Q99816 390 aa24.02■■□□□ 1.44
CHD4-214ENST00000545942 DUSP9Q99956 384 aaKnown RBP24.02■■□□□ 1.44
CHD4-214ENST00000545942 CDV3Q9UKY7 258 aaKnown RBP24.02■■□□□ 1.44
CHD4-214ENST00000545942 SCML2Q9UQR0 700 aa24.02■■□□□ 1.44
CHD4-214ENST00000545942 HHLA1C9JL84 531 aa24.01■■□□□ 1.43
CHD4-214ENST00000545942 ADH5P11766 374 aa24.01■■□□□ 1.43
CHD4-214ENST00000545942 PGFP49763 221 aa24.01■■□□□ 1.43
CHD4-214ENST00000545942 SEC13P55735 322 aa24.01■■□□□ 1.43
CHD4-214ENST00000545942 C2orf27AQ580R0 203 aa24.01■■□□□ 1.43
CHD4-214ENST00000545942 GPRIN1Q7Z2K8 1008 aa24.01■■□□□ 1.43
CHD4-214ENST00000545942 SEMA4DQ92854 862 aa24.01■■□□□ 1.43
CHD4-214ENST00000545942 JAKMIP2Q96AA8 810 aa24.01■■□□□ 1.43
CHD4-214ENST00000545942 LOXL4Q96JB6 756 aa24.01■■□□□ 1.43
CHD4-214ENST00000545942 RAB20Q9NX57 234 aa24.01■■□□□ 1.43
CHD4-214ENST00000545942 EBF1Q9UH73 591 aa24.01■■□□□ 1.43
CHD4-214ENST00000545942 PCDHA5Q9Y5H7 936 aa24.01■■□□□ 1.43
CHD4-214ENST00000545942 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.01■■□□□ 1.43
CHD4-214ENST00000545942 ACO1P21399 889 aaKnown RBP24■■□□□ 1.43
CHD4-214ENST00000545942 SLC6A11P48066 632 aa24■■□□□ 1.43
CHD4-214ENST00000545942 LY6G5CQ5SRR4 150 aa24■■□□□ 1.43
CHD4-214ENST00000545942 TTC39CQ8N584 583 aa24■■□□□ 1.43
CHD4-214ENST00000545942 SPATA20Q8TB22 786 aa24■■□□□ 1.43
CHD4-214ENST00000545942 SMARCE1Q969G3 411 aa24■■□□□ 1.43
CHD4-214ENST00000545942 GTPBP4Q9BZE4 634 aaKnown RBP24■■□□□ 1.43
CHD4-214ENST00000545942 CYLDQ9NQC7 956 aa24■■□□□ 1.43
CHD4-214ENST00000545942 HOOK1Q9UJC3 728 aaKnown RBP24■■□□□ 1.43
CHD4-214ENST00000545942 CEP250Q9BV73 2442 aa23.99■■□□□ 1.43
CHD4-214ENST00000545942 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.99■■□□□ 1.43
CHD4-214ENST00000545942 SLC16A3O15427 465 aaKnown RBP23.99■■□□□ 1.43
CHD4-214ENST00000545942 CYP26A1O43174 497 aa23.99■■□□□ 1.43
CHD4-214ENST00000545942 FOXD2O60548 495 aaPredicted RBP23.99■■□□□ 1.43
CHD4-214ENST00000545942 KAT7O95251 611 aa23.99■■□□□ 1.43
CHD4-214ENST00000545942 APODP05090 189 aa23.99■■□□□ 1.43
CHD4-214ENST00000545942 MRPS21P82921 87 aaKnown RBP23.99■■□□□ 1.43
CHD4-214ENST00000545942 FKBP3Q00688 224 aaKnown RBP23.99■■□□□ 1.43
CHD4-214ENST00000545942 GAD2Q05329 585 aa23.99■■□□□ 1.43
CHD4-214ENST00000545942 ZNF394Q53GI3 561 aa23.99■■□□□ 1.43
CHD4-214ENST00000545942 PRR23CQ6ZRP0 262 aa23.99■■□□□ 1.43
CHD4-214ENST00000545942 KBTBD6Q86V97 674 aa23.99■■□□□ 1.43
CHD4-214ENST00000545942 C12orf40Q86WS4 652 aa23.99■■□□□ 1.43
CHD4-214ENST00000545942 BBS7Q8IWZ6 715 aa23.99■■□□□ 1.43
CHD4-214ENST00000545942 TSTD1Q8NFU3 115 aa23.99■■□□□ 1.43
CHD4-214ENST00000545942 TIGD1Q96MW7 591 aa23.99■■□□□ 1.43
CHD4-214ENST00000545942 IRF1P10914 325 aa23.98■■□□□ 1.43
CHD4-214ENST00000545942 ATP5C1P36542 298 aaKnown RBP23.98■■□□□ 1.43
CHD4-214ENST00000545942 ATXN1P54253 815 aaKnown RBP23.98■■□□□ 1.43
CHD4-214ENST00000545942 PPP1R26Q5T8A7 1209 aaPredicted RBP23.98■■□□□ 1.43
CHD4-214ENST00000545942 TCERG1LQ5VWI1 586 aa23.98■■□□□ 1.43
CHD4-214ENST00000545942 BTBD8Q5XKL5 378 aa23.98■■□□□ 1.43
CHD4-214ENST00000545942 ZC3H3Q8IXZ2 948 aaKnown RBP23.98■■□□□ 1.43
CHD4-214ENST00000545942 HEXIM2Q96MH2 286 aaKnown RBP23.98■■□□□ 1.43
CHD4-214ENST00000545942 DUSP16Q9BY84 665 aa23.98■■□□□ 1.43
CHD4-214ENST00000545942 FAM124BQ9H5Z6 455 aaPredicted RBP23.98■■□□□ 1.43
CHD4-214ENST00000545942 ARHGEF4Q9NR80 690 aa23.98■■□□□ 1.43
CHD4-214ENST00000545942 CISHQ9NSE2 258 aa23.98■■□□□ 1.43
CHD4-214ENST00000545942 MMP17Q9ULZ9 603 aa23.98■■□□□ 1.43
CHD4-214ENST00000545942 ATG2BQ96BY7 2078 aa23.97■■□□□ 1.43
CHD4-214ENST00000545942 A0A0A0MRY4 1105 aa23.97■■□□□ 1.43
CHD4-214ENST00000545942 HOXC11O43248 304 aaPredicted RBP23.97■■□□□ 1.43
CHD4-214ENST00000545942 TBX18O95935 607 aa23.97■■□□□ 1.43
CHD4-214ENST00000545942 GRIA2P42262 883 aa23.97■■□□□ 1.43
CHD4-214ENST00000545942 KIF11P52732 1056 aa23.97■■□□□ 1.43
CHD4-214ENST00000545942 LRRC63Q05C16 580 aa23.97■■□□□ 1.43
CHD4-214ENST00000545942 GOLGA8FQ08AF8 430 aa23.97■■□□□ 1.43
CHD4-214ENST00000545942 GOLGA8DPQ0D2H9 430 aa23.97■■□□□ 1.43
CHD4-214ENST00000545942 MESP2Q0VG99 397 aa23.97■■□□□ 1.43
CHD4-214ENST00000545942 DCAF17Q5H9S7 520 aaPredicted RBP23.97■■□□□ 1.43
CHD4-214ENST00000545942 ANKRD40Q6AI12 368 aa23.97■■□□□ 1.43
CHD4-214ENST00000545942 HTR3DQ70Z44 454 aa23.97■■□□□ 1.43
CHD4-214ENST00000545942 NETO1Q8TDF5 533 aa23.97■■□□□ 1.43
CHD4-214ENST00000545942 ERCC4Q92889 916 aaPredicted RBP23.97■■□□□ 1.43
CHD4-214ENST00000545942 WBP2Q969T9 261 aa23.97■■□□□ 1.43
CHD4-214ENST00000545942 ZC3H10Q96K80 434 aaKnown RBP23.97■■□□□ 1.43
CHD4-214ENST00000545942 RTKNQ9BST9 563 aa23.97■■□□□ 1.43
CHD4-214ENST00000545942 KLF16Q9BXK1 252 aaPredicted RBP23.97■■□□□ 1.43
CHD4-214ENST00000545942 SPHK2Q9NRA0 654 aa23.97■■□□□ 1.43
CHD4-214ENST00000545942 OSER1Q9NX31 292 aa23.97■■□□□ 1.43
CHD4-214ENST00000545942 EPN2O95208 641 aa23.96■■□□□ 1.43
CHD4-214ENST00000545942 DGKEP52429 567 aa23.96■■□□□ 1.43
CHD4-214ENST00000545942 PMS1P54277 932 aaKnown RBP23.96■■□□□ 1.43
CHD4-214ENST00000545942 CRY1Q16526 586 aa23.96■■□□□ 1.43
CHD4-214ENST00000545942 HSF5Q4G112 596 aaPredicted RBP23.96■■□□□ 1.43
CHD4-214ENST00000545942 CBWD6Q4V339 395 aa23.96■■□□□ 1.43
CHD4-214ENST00000545942 CBWD3Q5JTY5 395 aa23.96■■□□□ 1.43
CHD4-214ENST00000545942 CBWD5Q5RIA9 395 aa23.96■■□□□ 1.43
CHD4-214ENST00000545942 KLHDC10Q6PID8 442 aa23.96■■□□□ 1.43
CHD4-214ENST00000545942 SFTPA1Q8IWL2 248 aa23.96■■□□□ 1.43
CHD4-214ENST00000545942 CCDC33Q8N5R6 958 aa23.96■■□□□ 1.43
CHD4-214ENST00000545942 TMEM176AQ96HP8 235 aa23.96■■□□□ 1.43
CHD4-214ENST00000545942 ARID3AQ99856 593 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms