RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 CNGB3Q9NQW8 809 aa17.12■□□□□ 0.33
LIMS2-217ENST00000545738 NUDT5Q9UKK9 219 aa17.12■□□□□ 0.33
LIMS2-217ENST00000545738 CEP83Q9Y592 693 aa17.12■□□□□ 0.33
LIMS2-217ENST00000545738 SSU72P8A0A1W2PR75 194 aa17.11■□□□□ 0.33
LIMS2-217ENST00000545738 ATMINO43313 823 aaPredicted RBP17.11■□□□□ 0.33
LIMS2-217ENST00000545738 MRPS5P82675 430 aaKnown RBP17.11■□□□□ 0.33
LIMS2-217ENST00000545738 ACAD10Q6JQN1 1059 aa17.11■□□□□ 0.33
LIMS2-217ENST00000545738 CYP26C1Q6V0L0 522 aa17.11■□□□□ 0.33
LIMS2-217ENST00000545738 ERICH1Q86X53 443 aa17.11■□□□□ 0.33
LIMS2-217ENST00000545738 PHF13Q86YI8 300 aaPredicted RBP17.11■□□□□ 0.33
LIMS2-217ENST00000545738 SIX6OS1Q8N1H7 587 aa17.11■□□□□ 0.33
LIMS2-217ENST00000545738 FGF13Q92913 245 aa17.11■□□□□ 0.33
LIMS2-217ENST00000545738 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.11■□□□□ 0.33
LIMS2-217ENST00000545738 ATXN3LQ9H3M9 355 aa17.11■□□□□ 0.33
LIMS2-217ENST00000545738 FBXO44Q9H4M3 255 aa17.11■□□□□ 0.33
LIMS2-217ENST00000545738 CCSER2Q9H7U1 834 aa17.11■□□□□ 0.33
LIMS2-217ENST00000545738 CYLDQ9NQC7 956 aa17.11■□□□□ 0.33
LIMS2-217ENST00000545738 NAGPAQ9UK23 515 aa17.11■□□□□ 0.33
LIMS2-217ENST00000545738 MRPS23Q9Y3D9 190 aaKnown RBP17.11■□□□□ 0.33
LIMS2-217ENST00000545738 TCRBV5S1A1TA0A578 114 aa17.1■□□□□ 0.33
LIMS2-217ENST00000545738 TBX18O95935 607 aa17.1■□□□□ 0.33
LIMS2-217ENST00000545738 FSHRP23945 695 aa17.1■□□□□ 0.33
LIMS2-217ENST00000545738 ZXDBP98169 803 aa17.1■□□□□ 0.33
LIMS2-217ENST00000545738 SMAD2Q15796 467 aaKnown RBP17.1■□□□□ 0.33
LIMS2-217ENST00000545738 PTCRAQ6ISU1 281 aaPredicted RBP17.1■□□□□ 0.33
LIMS2-217ENST00000545738 TRNP1Q6NT89 227 aa17.1■□□□□ 0.33
LIMS2-217ENST00000545738 RAD9BQ6WBX8 426 aa17.1■□□□□ 0.33
LIMS2-217ENST00000545738 SCML4Q8N228 414 aa17.1■□□□□ 0.33
LIMS2-217ENST00000545738 RIPOR3Q96MK2 946 aa17.1■□□□□ 0.33
LIMS2-217ENST00000545738 CYP2S1Q96SQ9 504 aa17.1■□□□□ 0.33
LIMS2-217ENST00000545738 SLC46A2Q9BY10 475 aa17.1■□□□□ 0.33
LIMS2-217ENST00000545738 PACSIN1Q9BY11 444 aa17.1■□□□□ 0.33
LIMS2-217ENST00000545738 ADAM33Q9BZ11 813 aa17.1■□□□□ 0.33
LIMS2-217ENST00000545738 RNF38Q9H0F5 515 aa17.1■□□□□ 0.33
LIMS2-217ENST00000545738 TCF20Q9UGU0 1960 aaKnown RBP17.1■□□□□ 0.33
LIMS2-217ENST00000545738 GRAP2O75791 330 aa17.1■□□□□ 0.33
LIMS2-217ENST00000545738 OAS1P00973 400 aaKnown RBP17.1■□□□□ 0.33
LIMS2-217ENST00000545738 MTHFRP42898 656 aa17.1■□□□□ 0.33
LIMS2-217ENST00000545738 ACADSBP45954 432 aa17.1■□□□□ 0.33
LIMS2-217ENST00000545738 NSFP46459 744 aaKnown RBP17.1■□□□□ 0.33
LIMS2-217ENST00000545738 SLC18A3Q16572 532 aa17.1■□□□□ 0.33
LIMS2-217ENST00000545738 SNX30Q5VWJ9 437 aa17.1■□□□□ 0.33
LIMS2-217ENST00000545738 MCOLN2Q8IZK6 566 aa17.1■□□□□ 0.33
LIMS2-217ENST00000545738 RIN3Q8TB24 985 aa17.1■□□□□ 0.33
LIMS2-217ENST00000545738 EDEM1Q92611 657 aa17.1■□□□□ 0.33
LIMS2-217ENST00000545738 C18orf8Q96DM3 657 aa17.1■□□□□ 0.33
LIMS2-217ENST00000545738 SLITRK1Q96PX8 696 aa17.1■□□□□ 0.33
LIMS2-217ENST00000545738 SMG9Q9H0W8 520 aaKnown RBP17.1■□□□□ 0.33
LIMS2-217ENST00000545738 ISCUQ9H1K1 167 aa17.1■□□□□ 0.33
LIMS2-217ENST00000545738 ZNHIT6Q9NWK9 470 aaKnown RBP17.1■□□□□ 0.33
LIMS2-217ENST00000545738 COMMD8Q9NX08 183 aa17.1■□□□□ 0.33
LIMS2-217ENST00000545738 THEGQ9P2T0 379 aa17.1■□□□□ 0.33
LIMS2-217ENST00000545738 UXTQ9UBK9 157 aaPredicted RBP17.1■□□□□ 0.33
LIMS2-217ENST00000545738 MDM4O15151 490 aa17.09■□□□□ 0.33
LIMS2-217ENST00000545738 ABL1P00519 1130 aa17.09■□□□□ 0.33
LIMS2-217ENST00000545738 FTLP02792 175 aaPredicted RBP17.09■□□□□ 0.33
LIMS2-217ENST00000545738 GZMAP12544 262 aa17.09■□□□□ 0.33
LIMS2-217ENST00000545738 CDC25CP30307 473 aa17.09■□□□□ 0.33
LIMS2-217ENST00000545738 YWHAGP61981 247 aaKnown RBP eCLIP17.09■□□□□ 0.33
LIMS2-217ENST00000545738 PITX1P78337 314 aaPredicted RBP17.09■□□□□ 0.33
LIMS2-217ENST00000545738 OR6B2Q6IFH4 312 aa17.09■□□□□ 0.33
LIMS2-217ENST00000545738 ALKBH5Q6P6C2 394 aaKnown RBP17.09■□□□□ 0.33
LIMS2-217ENST00000545738 MON1AQ86VX9 555 aa17.09■□□□□ 0.33
LIMS2-217ENST00000545738 MAB21L3Q8N8X9 362 aa17.09■□□□□ 0.33
LIMS2-217ENST00000545738 MCRS1Q96EZ8 462 aa17.09■□□□□ 0.33
LIMS2-217ENST00000545738 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.09■□□□□ 0.33
LIMS2-217ENST00000545738 ADAM22Q9P0K1 906 aa17.09■□□□□ 0.33
LIMS2-217ENST00000545738 TFR2Q9UP52 801 aa17.09■□□□□ 0.33
LIMS2-217ENST00000545738 HELZP42694 1942 aaKnown RBP17.09■□□□□ 0.33
LIMS2-217ENST00000545738 NUP210Q8TEM1 1887 aaPredicted RBP17.08■□□□□ 0.33
LIMS2-217ENST00000545738 PRAMEF12O95522 483 aa17.08■□□□□ 0.32
LIMS2-217ENST00000545738 RRM1P23921 792 aa17.08■□□□□ 0.32
LIMS2-217ENST00000545738 GPR158Q5T848 1215 aa17.08■□□□□ 0.32
LIMS2-217ENST00000545738 SYPL2Q5VXT5 272 aa17.08■□□□□ 0.32
LIMS2-217ENST00000545738 BSPRYQ5W0U4 402 aa17.08■□□□□ 0.32
LIMS2-217ENST00000545738 LEMD2Q8NC56 503 aa17.08■□□□□ 0.32
LIMS2-217ENST00000545738 OVCA2Q8WZ82 227 aa17.08■□□□□ 0.32
LIMS2-217ENST00000545738 NOX5Q96PH1 765 aa17.08■□□□□ 0.32
LIMS2-217ENST00000545738 SYNCQ9H7C4 482 aa17.08■□□□□ 0.32
LIMS2-217ENST00000545738 TRPM5Q9NZQ8 1165 aa17.08■□□□□ 0.32
LIMS2-217ENST00000545738 CCL26Q9Y258 94 aa17.08■□□□□ 0.32
LIMS2-217ENST00000545738 REXO2Q9Y3B8 237 aaKnown RBP17.08■□□□□ 0.32
LIMS2-217ENST00000545738 GOLGA8SH3BPF8 625 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 COCHO43405 550 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 RTN2O75298 545 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 FBXO21O94952 628 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 OLFM2O95897 454 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 LTFP02788 710 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 SLC6A3Q01959 620 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 TSR1Q2NL82 804 aaKnown RBP17.07■□□□□ 0.32
LIMS2-217ENST00000545738 CCDC122Q5T0U0 273 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 ARL14EPQ8N8R7 260 aaPredicted RBP17.07■□□□□ 0.32
LIMS2-217ENST00000545738 JOSD2Q8TAC2 188 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 IPO4Q8TEX9 1081 aaKnown RBP17.07■□□□□ 0.32
LIMS2-217ENST00000545738 ARHGEF26Q96DR7 871 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 RSPRY1Q96DX4 576 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 ZFRQ96KR1 1074 aaKnown RBP17.07■□□□□ 0.32
LIMS2-217ENST00000545738 CCDC42Q96M95 316 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 NECTIN4Q96NY8 510 aa17.07■□□□□ 0.32
LIMS2-217ENST00000545738 BAG1Q99933 345 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms