RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 ACVR2AP27037 513 aa5.72□□□□□ -1.49
SNHG1-224ENST00000545688 PGDP52209 483 aa5.72□□□□□ -1.49
SNHG1-224ENST00000545688 CACNB3P54284 484 aa5.72□□□□□ -1.49
SNHG1-224ENST00000545688 SLC29A2Q14542 456 aa5.72□□□□□ -1.49
SNHG1-224ENST00000545688 MEX3CQ5U5Q3 659 aaKnown RBP5.72□□□□□ -1.49
SNHG1-224ENST00000545688 RNF220Q5VTB9 566 aa5.72□□□□□ -1.49
SNHG1-224ENST00000545688 MAFAQ8NHW3 353 aaPredicted RBP5.72□□□□□ -1.49
SNHG1-224ENST00000545688 ZNF398Q8TD17 642 aa5.72□□□□□ -1.49
SNHG1-224ENST00000545688 PNISRQ8TF01 805 aaKnown RBP5.72□□□□□ -1.49
SNHG1-224ENST00000545688 JDP2Q8WYK2 163 aa5.72□□□□□ -1.49
SNHG1-224ENST00000545688 DHX36Q9H2U1 1008 aaKnown RBP5.72□□□□□ -1.49
SNHG1-224ENST00000545688 MID2Q9UJV3 735 aa5.72□□□□□ -1.49
SNHG1-224ENST00000545688 OGDHLQ9ULD0 1010 aa5.72□□□□□ -1.49
SNHG1-224ENST00000545688 EXOC5O00471 708 aa5.71□□□□□ -1.5
SNHG1-224ENST00000545688 MYF5P13349 255 aa5.71□□□□□ -1.5
SNHG1-224ENST00000545688 CPT1AP50416 773 aa5.71□□□□□ -1.5
SNHG1-224ENST00000545688 GATMP50440 423 aa5.71□□□□□ -1.5
SNHG1-224ENST00000545688 STK3Q13188 491 aa5.71□□□□□ -1.5
SNHG1-224ENST00000545688 LARS2Q15031 903 aaKnown RBP5.71□□□□□ -1.5
SNHG1-224ENST00000545688 PXDC1Q5TGL8 231 aa5.71□□□□□ -1.5
SNHG1-224ENST00000545688 DENND2CQ68D51 928 aa5.71□□□□□ -1.5
SNHG1-224ENST00000545688 TMEM65Q6PI78 240 aa5.71□□□□□ -1.5
SNHG1-224ENST00000545688 CCDC149Q6ZUS6 474 aa5.71□□□□□ -1.5
SNHG1-224ENST00000545688 SESTD1Q86VW0 696 aa5.71□□□□□ -1.5
SNHG1-224ENST00000545688 OSR1Q8TAX0 266 aaPredicted RBP5.71□□□□□ -1.5
SNHG1-224ENST00000545688 APIPQ96GX9 242 aa5.71□□□□□ -1.5
SNHG1-224ENST00000545688 LRRC27Q9C0I9 530 aa5.71□□□□□ -1.5
SNHG1-224ENST00000545688 CHST8Q9H2A9 424 aa5.71□□□□□ -1.5
SNHG1-224ENST00000545688 TRIM36Q9NQ86 728 aa5.71□□□□□ -1.5
SNHG1-224ENST00000545688 MGAT4CQ9UBM8 478 aa5.71□□□□□ -1.5
SNHG1-224ENST00000545688 RIMKLBQ9ULI2 386 aa5.71□□□□□ -1.5
SNHG1-224ENST00000545688 PROB1E7EW31 1015 aa5.7□□□□□ -1.5
SNHG1-224ENST00000545688 ADAM10O14672 748 aa5.7□□□□□ -1.5
SNHG1-224ENST00000545688 TMPRSS11DO60235 418 aa5.7□□□□□ -1.5
SNHG1-224ENST00000545688 MAP4K4O95819 1239 aaPredicted RBP5.7□□□□□ -1.5
SNHG1-224ENST00000545688 TXNP10599 105 aaKnown RBP5.7□□□□□ -1.5
SNHG1-224ENST00000545688 MCM5P33992 734 aa5.7□□□□□ -1.5
SNHG1-224ENST00000545688 NR4A2P43354 598 aa5.7□□□□□ -1.5
SNHG1-224ENST00000545688 MAPK7Q13164 816 aa5.7□□□□□ -1.5
SNHG1-224ENST00000545688 GRM3Q14832 879 aa5.7□□□□□ -1.5
SNHG1-224ENST00000545688 POLD3Q15054 466 aaPredicted RBP5.7□□□□□ -1.5
SNHG1-224ENST00000545688 DCDC5Q6ZRR9 648 aa5.7□□□□□ -1.5
SNHG1-224ENST00000545688 METTL25Q8N6Q8 603 aa5.7□□□□□ -1.5
SNHG1-224ENST00000545688 NANOGP1Q8N7R0 232 aa5.7□□□□□ -1.5
SNHG1-224ENST00000545688 ZNF287Q9HBT7 754 aa5.7□□□□□ -1.5
SNHG1-224ENST00000545688 ITGB1BP2Q9UKP3 347 aa5.7□□□□□ -1.5
SNHG1-224ENST00000545688 ASAP1Q9ULH1 1129 aa5.7□□□□□ -1.5
SNHG1-224ENST00000545688 AFG3L2Q9Y4W6 797 aa5.7□□□□□ -1.5
SNHG1-224ENST00000545688 TPP1O14773 563 aa5.69□□□□□ -1.5
SNHG1-224ENST00000545688 TSPAN6O43657 245 aa5.69□□□□□ -1.5
SNHG1-224ENST00000545688 PARP1P09874 1014 aaKnown RBP5.69□□□□□ -1.5
SNHG1-224ENST00000545688 TPH1P17752 444 aa5.69□□□□□ -1.5
SNHG1-224ENST00000545688 GHRHRQ02643 423 aa5.69□□□□□ -1.5
SNHG1-224ENST00000545688 SEC23BQ15437 767 aa5.69□□□□□ -1.5
SNHG1-224ENST00000545688 KIAA0753Q2KHM9 967 aa5.69□□□□□ -1.5
SNHG1-224ENST00000545688 C4orf46Q504U0 113 aa5.69□□□□□ -1.5
SNHG1-224ENST00000545688 DARS2Q6PI48 645 aaKnown RBP5.69□□□□□ -1.5
SNHG1-224ENST00000545688 SHC4Q6S5L8 630 aa5.69□□□□□ -1.5
SNHG1-224ENST00000545688 KRT73Q86Y46 540 aa5.69□□□□□ -1.5
SNHG1-224ENST00000545688 YAF2Q8IY57 180 aa5.69□□□□□ -1.5
SNHG1-224ENST00000545688 C11orf44Q8N8P7 122 aa5.69□□□□□ -1.5
SNHG1-224ENST00000545688 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-224ENST00000545688 PIGOQ8TEQ8 1089 aa5.69□□□□□ -1.5
SNHG1-224ENST00000545688 MAP4K1Q92918 833 aa5.69□□□□□ -1.5
SNHG1-224ENST00000545688 TMEM79Q9BSE2 394 aa5.69□□□□□ -1.5
SNHG1-224ENST00000545688 DKK4Q9UBT3 224 aa5.69□□□□□ -1.5
SNHG1-224ENST00000545688 AQP7P3A6NL99 342 aa5.68□□□□□ -1.5
SNHG1-224ENST00000545688 VSTM5A8MXK1 200 aa5.68□□□□□ -1.5
SNHG1-224ENST00000545688 H3BNC9 293 aa5.68□□□□□ -1.5
SNHG1-224ENST00000545688 GOLIM4O00461 696 aa5.68□□□□□ -1.5
SNHG1-224ENST00000545688 RNF8O76064 485 aa5.68□□□□□ -1.5
SNHG1-224ENST00000545688 ZBED1O96006 694 aa5.68□□□□□ -1.5
SNHG1-224ENST00000545688 ATF7P17544 494 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-224ENST00000545688 NTSR1P30989 418 aa5.68□□□□□ -1.5
SNHG1-224ENST00000545688 CCT4P50991 539 aaKnown RBP5.68□□□□□ -1.5
SNHG1-224ENST00000545688 PLCD1P51178 756 aa5.68□□□□□ -1.5
SNHG1-224ENST00000545688 DEUP1Q05D60 604 aa5.68□□□□□ -1.5
SNHG1-224ENST00000545688 KCNB1Q14721 858 aa5.68□□□□□ -1.5
SNHG1-224ENST00000545688 KCNAB1Q14722 419 aa5.68□□□□□ -1.5
SNHG1-224ENST00000545688 PLAG1Q6DJT9 500 aa5.68□□□□□ -1.5
SNHG1-224ENST00000545688 AWAT2Q6E213 333 aa5.68□□□□□ -1.5
SNHG1-224ENST00000545688 USP49Q70CQ1 688 aa5.68□□□□□ -1.5
SNHG1-224ENST00000545688 UNC13DQ70J99 1090 aa5.68□□□□□ -1.5
SNHG1-224ENST00000545688 CHST15Q7LFX5 561 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-224ENST00000545688 SRGAP1Q7Z6B7 1085 aa5.68□□□□□ -1.5
SNHG1-224ENST00000545688 TECPR1Q7Z6L1 1165 aa5.68□□□□□ -1.5
SNHG1-224ENST00000545688 NRACQ8N912 160 aa5.68□□□□□ -1.5
SNHG1-224ENST00000545688 C16orf52Q8NHV5 167 aa5.68□□□□□ -1.5
SNHG1-224ENST00000545688 COQ8BQ96D53 544 aa5.68□□□□□ -1.5
SNHG1-224ENST00000545688 HMCESQ96FZ2 354 aa5.68□□□□□ -1.5
SNHG1-224ENST00000545688 HS6ST2Q96MM7 605 aa5.68□□□□□ -1.5
SNHG1-224ENST00000545688 RGS17Q9UGC6 210 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-224ENST00000545688 G3BP2Q9UN86 482 aaKnown RBP5.68□□□□□ -1.5
SNHG1-224ENST00000545688 MGEA5O60502 916 aa5.67□□□□□ -1.5
SNHG1-224ENST00000545688 FGBP02675 491 aa5.67□□□□□ -1.5
SNHG1-224ENST00000545688 HRGP04196 525 aa5.67□□□□□ -1.5
SNHG1-224ENST00000545688 BTF3P20290 206 aaKnown RBP5.67□□□□□ -1.5
SNHG1-224ENST00000545688 PEX2P28328 305 aa5.67□□□□□ -1.5
SNHG1-224ENST00000545688 HOXD9P28356 352 aaPredicted RBP5.67□□□□□ -1.5
SNHG1-224ENST00000545688 CARSP49589 748 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms