RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 COBLL1Q53SF7 1204 aa21■□□□□ 0.95
CHD4-213ENST00000545584 TCERG1LQ5VWI1 586 aa21■□□□□ 0.95
CHD4-213ENST00000545584 RHBDF2Q6PJF5 856 aa21■□□□□ 0.95
CHD4-213ENST00000545584 CACNA2D4Q7Z3S7 1137 aa21■□□□□ 0.95
CHD4-213ENST00000545584 FAM160A2Q8N612 972 aaPredicted RBP21■□□□□ 0.95
CHD4-213ENST00000545584 ENGASEQ8NFI3 743 aa21■□□□□ 0.95
CHD4-213ENST00000545584 TIGD1Q96MW7 591 aa21■□□□□ 0.95
CHD4-213ENST00000545584 PNKPQ96T60 521 aa21■□□□□ 0.95
CHD4-213ENST00000545584 PNPLA8Q9NP80 782 aa21■□□□□ 0.95
CHD4-213ENST00000545584 PARD6AQ9NPB6 346 aa21■□□□□ 0.95
CHD4-213ENST00000545584 CDV3Q9UKY7 258 aaKnown RBP21■□□□□ 0.95
CHD4-213ENST00000545584 PCDHA5Q9Y5H7 936 aa21■□□□□ 0.95
CHD4-213ENST00000545584 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.99■□□□□ 0.95
CHD4-213ENST00000545584 SLC16A3O15427 465 aaKnown RBP20.99■□□□□ 0.95
CHD4-213ENST00000545584 APODP05090 189 aa20.99■□□□□ 0.95
CHD4-213ENST00000545584 ACO1P21399 889 aaKnown RBP20.99■□□□□ 0.95
CHD4-213ENST00000545584 TGM1P22735 817 aa20.99■□□□□ 0.95
CHD4-213ENST00000545584 SEC13P55735 322 aa20.99■□□□□ 0.95
CHD4-213ENST00000545584 GAD2Q05329 585 aa20.99■□□□□ 0.95
CHD4-213ENST00000545584 GOLGA8FQ08AF8 430 aa20.99■□□□□ 0.95
CHD4-213ENST00000545584 GOLGA8DPQ0D2H9 430 aa20.99■□□□□ 0.95
CHD4-213ENST00000545584 STIM1Q13586 685 aa20.99■□□□□ 0.95
CHD4-213ENST00000545584 GAB4Q2WGN9 574 aa20.99■□□□□ 0.95
CHD4-213ENST00000545584 ZNF394Q53GI3 561 aa20.99■□□□□ 0.95
CHD4-213ENST00000545584 C2orf27AQ580R0 203 aa20.99■□□□□ 0.95
CHD4-213ENST00000545584 DCAF17Q5H9S7 520 aaPredicted RBP20.99■□□□□ 0.95
CHD4-213ENST00000545584 BTBD8Q5XKL5 378 aa20.99■□□□□ 0.95
CHD4-213ENST00000545584 USP33Q8TEY7 942 aa20.99■□□□□ 0.95
CHD4-213ENST00000545584 WHAMMQ8TF30 809 aa20.99■□□□□ 0.95
CHD4-213ENST00000545584 ZFRQ96KR1 1074 aaKnown RBP20.99■□□□□ 0.95
CHD4-213ENST00000545584 HEXIM2Q96MH2 286 aaKnown RBP20.99■□□□□ 0.95
CHD4-213ENST00000545584 SEMA4GQ9NTN9 838 aa20.99■□□□□ 0.95
CHD4-213ENST00000545584 POLR3BQ9NW08 1133 aaPredicted RBP20.99■□□□□ 0.95
CHD4-213ENST00000545584 SCML2Q9UQR0 700 aa20.99■□□□□ 0.95
CHD4-213ENST00000545584 K7EQS6 105 aa20.98■□□□□ 0.95
CHD4-213ENST00000545584 FOXD2O60548 495 aaPredicted RBP20.98■□□□□ 0.95
CHD4-213ENST00000545584 IRF1P10914 325 aa20.98■□□□□ 0.95
CHD4-213ENST00000545584 ATP5C1P36542 298 aaKnown RBP20.98■□□□□ 0.95
CHD4-213ENST00000545584 MRPS21P82921 87 aaKnown RBP20.98■□□□□ 0.95
CHD4-213ENST00000545584 LRRC63Q05C16 580 aa20.98■□□□□ 0.95
CHD4-213ENST00000545584 LY6G5CQ5SRR4 150 aa20.98■□□□□ 0.95
CHD4-213ENST00000545584 TSTD1Q8NFU3 115 aa20.98■□□□□ 0.95
CHD4-213ENST00000545584 SEMA4DQ92854 862 aa20.98■□□□□ 0.95
CHD4-213ENST00000545584 LOXL4Q96JB6 756 aa20.98■□□□□ 0.95
CHD4-213ENST00000545584 DUSP9Q99956 384 aaKnown RBP20.98■□□□□ 0.95
CHD4-213ENST00000545584 DUSP16Q9BY84 665 aa20.98■□□□□ 0.95
CHD4-213ENST00000545584 FAM124BQ9H5Z6 455 aaPredicted RBP20.98■□□□□ 0.95
CHD4-213ENST00000545584 ARHGEF4Q9NR80 690 aa20.98■□□□□ 0.95
CHD4-213ENST00000545584 CEP250Q9BV73 2442 aa20.98■□□□□ 0.95
CHD4-213ENST00000545584 KAT7O95251 611 aa20.97■□□□□ 0.95
CHD4-213ENST00000545584 SLC6A11P48066 632 aa20.97■□□□□ 0.95
CHD4-213ENST00000545584 CSRP2Q16527 193 aa20.97■□□□□ 0.95
CHD4-213ENST00000545584 PREPLQ4J6C6 727 aaPredicted RBP20.97■□□□□ 0.95
CHD4-213ENST00000545584 PPP1R26Q5T8A7 1209 aaPredicted RBP20.97■□□□□ 0.95
CHD4-213ENST00000545584 ANKRD40Q6AI12 368 aa20.97■□□□□ 0.95
CHD4-213ENST00000545584 GPRIN1Q7Z2K8 1008 aa20.97■□□□□ 0.95
CHD4-213ENST00000545584 TADA2BQ86TJ2 420 aa20.97■□□□□ 0.95
CHD4-213ENST00000545584 BBS7Q8IWZ6 715 aa20.97■□□□□ 0.95
CHD4-213ENST00000545584 SPATA20Q8TB22 786 aa20.97■□□□□ 0.95
CHD4-213ENST00000545584 CYLDQ9NQC7 956 aa20.97■□□□□ 0.95
CHD4-213ENST00000545584 CISHQ9NSE2 258 aa20.97■□□□□ 0.95
CHD4-213ENST00000545584 ARMCX3Q9UH62 379 aaPredicted RBP20.97■□□□□ 0.95
CHD4-213ENST00000545584 EBF1Q9UH73 591 aa20.97■□□□□ 0.95
CHD4-213ENST00000545584 LSM7Q9UK45 103 aaKnown RBP20.97■□□□□ 0.95
CHD4-213ENST00000545584 FRYLO94915 3013 aa20.96■□□□□ 0.95
CHD4-213ENST00000545584 HHLA1C9JL84 531 aa20.96■□□□□ 0.95
CHD4-213ENST00000545584 PSMA7O14818 248 aa20.96■□□□□ 0.95
CHD4-213ENST00000545584 CYP26A1O43174 497 aa20.96■□□□□ 0.95
CHD4-213ENST00000545584 PPP1R2P41236 205 aa20.96■□□□□ 0.95
CHD4-213ENST00000545584 GRIA2P42262 883 aa20.96■□□□□ 0.95
CHD4-213ENST00000545584 PSEN1P49768 467 aa20.96■□□□□ 0.95
CHD4-213ENST00000545584 DGKEP52429 567 aa20.96■□□□□ 0.95
CHD4-213ENST00000545584 SLC8A3P57103 927 aa20.96■□□□□ 0.95
CHD4-213ENST00000545584 NUDT18Q6ZVK8 323 aa20.96■□□□□ 0.95
CHD4-213ENST00000545584 ERCC4Q92889 916 aaPredicted RBP20.96■□□□□ 0.95
CHD4-213ENST00000545584 TMEM176AQ96HP8 235 aa20.96■□□□□ 0.95
CHD4-213ENST00000545584 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.96■□□□□ 0.95
CHD4-213ENST00000545584 RALGAPA1Q6GYQ0 2036 aa20.95■□□□□ 0.94
CHD4-213ENST00000545584 MYO16Q9Y6X6 1858 aa20.95■□□□□ 0.94
CHD4-213ENST00000545584 TBX18O95935 607 aa20.95■□□□□ 0.94
CHD4-213ENST00000545584 RALAP11233 206 aa20.95■□□□□ 0.94
CHD4-213ENST00000545584 RARGP13631 454 aa20.95■□□□□ 0.94
CHD4-213ENST00000545584 PGFP49763 221 aa20.95■□□□□ 0.94
CHD4-213ENST00000545584 KIF11P52732 1056 aa20.95■□□□□ 0.94
CHD4-213ENST00000545584 YWHAEP62258 255 aaKnown RBP20.95■□□□□ 0.94
CHD4-213ENST00000545584 KDSRQ06136 332 aa20.95■□□□□ 0.94
CHD4-213ENST00000545584 ANO4Q32M45 955 aa20.95■□□□□ 0.94
CHD4-213ENST00000545584 HSF5Q4G112 596 aaPredicted RBP20.95■□□□□ 0.94
CHD4-213ENST00000545584 KLHDC10Q6PID8 442 aa20.95■□□□□ 0.94
CHD4-213ENST00000545584 PRR23CQ6ZRP0 262 aa20.95■□□□□ 0.94
CHD4-213ENST00000545584 KBTBD6Q86V97 674 aa20.95■□□□□ 0.94
CHD4-213ENST00000545584 C12orf40Q86WS4 652 aa20.95■□□□□ 0.94
CHD4-213ENST00000545584 ZC3H3Q8IXZ2 948 aaKnown RBP20.95■□□□□ 0.94
CHD4-213ENST00000545584 ELOA2Q8IYF1 753 aaPredicted RBP20.95■□□□□ 0.94
CHD4-213ENST00000545584 CCDC33Q8N5R6 958 aa20.95■□□□□ 0.94
CHD4-213ENST00000545584 KLF16Q9BXK1 252 aaPredicted RBP20.95■□□□□ 0.94
CHD4-213ENST00000545584 METTL14Q9HCE5 456 aaKnown RBP20.95■□□□□ 0.94
CHD4-213ENST00000545584 SPHK2Q9NRA0 654 aa20.95■□□□□ 0.94
CHD4-213ENST00000545584 DNMT3LQ9UJW3 386 aa20.95■□□□□ 0.94
CHD4-213ENST00000545584 NAGPAQ9UK23 515 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms