RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 E2F8A0AVK6 867 aa22.32■■□□□ 1.16
SCARB1-210ENST00000545493 TRIM49BA6NDI0 452 aa22.32■■□□□ 1.16
SCARB1-210ENST00000545493 CETN3O15182 167 aa22.32■■□□□ 1.16
SCARB1-210ENST00000545493 SLC16A3O15427 465 aaKnown RBP22.32■■□□□ 1.16
SCARB1-210ENST00000545493 TLR5O60602 858 aa22.32■■□□□ 1.16
SCARB1-210ENST00000545493 LRP3O75074 770 aa22.32■■□□□ 1.16
SCARB1-210ENST00000545493 SLC6A11P48066 632 aa22.32■■□□□ 1.16
SCARB1-210ENST00000545493 SEC13P55735 322 aa22.32■■□□□ 1.16
SCARB1-210ENST00000545493 CBWD6Q4V339 395 aa22.32■■□□□ 1.16
SCARB1-210ENST00000545493 CBWD3Q5JTY5 395 aa22.32■■□□□ 1.16
SCARB1-210ENST00000545493 CBWD5Q5RIA9 395 aa22.32■■□□□ 1.16
SCARB1-210ENST00000545493 BBS7Q8IWZ6 715 aa22.32■■□□□ 1.16
SCARB1-210ENST00000545493 CAMKK1Q8N5S9 505 aa22.32■■□□□ 1.16
SCARB1-210ENST00000545493 USP33Q8TEY7 942 aa22.32■■□□□ 1.16
SCARB1-210ENST00000545493 DUSP9Q99956 384 aaKnown RBP22.32■■□□□ 1.16
SCARB1-210ENST00000545493 FBXO44Q9H4M3 255 aa22.32■■□□□ 1.16
SCARB1-210ENST00000545493 PNPLA8Q9NP80 782 aa22.32■■□□□ 1.16
SCARB1-210ENST00000545493 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.32■■□□□ 1.16
SCARB1-210ENST00000545493 LAMA1P25391 3075 aa22.31■■□□□ 1.16
SCARB1-210ENST00000545493 RPP40O75818 363 aaKnown RBP22.31■■□□□ 1.16
SCARB1-210ENST00000545493 IRF1P10914 325 aa22.31■■□□□ 1.16
SCARB1-210ENST00000545493 ADH5P11766 374 aa22.31■■□□□ 1.16
SCARB1-210ENST00000545493 PPP1R26Q5T8A7 1209 aaPredicted RBP22.31■■□□□ 1.16
SCARB1-210ENST00000545493 DGLUCYQ7Z3D6 616 aa22.31■■□□□ 1.16
SCARB1-210ENST00000545493 CCDC150Q8NCX0 1101 aa22.31■■□□□ 1.16
SCARB1-210ENST00000545493 FBXL13Q8NEE6 735 aa22.31■■□□□ 1.16
SCARB1-210ENST00000545493 GSDMAQ96QA5 445 aa22.31■■□□□ 1.16
SCARB1-210ENST00000545493 NMUR1Q9HB89 426 aa22.31■■□□□ 1.16
SCARB1-210ENST00000545493 SEMA4GQ9NTN9 838 aa22.31■■□□□ 1.16
SCARB1-210ENST00000545493 SCML2Q9UQR0 700 aa22.31■■□□□ 1.16
SCARB1-210ENST00000545493 SH3BP1Q9Y3L3 701 aa22.31■■□□□ 1.16
SCARB1-210ENST00000545493 PCDHA5Q9Y5H7 936 aa22.31■■□□□ 1.16
SCARB1-210ENST00000545493 GOLGA6L4A6NEF3 574 aa22.3■■□□□ 1.16
SCARB1-210ENST00000545493 GREM1O60565 184 aa22.3■■□□□ 1.16
SCARB1-210ENST00000545493 ADH1CP00326 375 aa22.3■■□□□ 1.16
SCARB1-210ENST00000545493 TRIM21P19474 475 aaKnown RBP22.3■■□□□ 1.16
SCARB1-210ENST00000545493 EIF2DP41214 584 aaKnown RBP22.3■■□□□ 1.16
SCARB1-210ENST00000545493 KDSRQ06136 332 aa22.3■■□□□ 1.16
SCARB1-210ENST00000545493 ZNF394Q53GI3 561 aa22.3■■□□□ 1.16
SCARB1-210ENST00000545493 DCAF17Q5H9S7 520 aaPredicted RBP22.3■■□□□ 1.16
SCARB1-210ENST00000545493 LY6G5CQ5SRR4 150 aa22.3■■□□□ 1.16
SCARB1-210ENST00000545493 KBTBD6Q86V97 674 aa22.3■■□□□ 1.16
SCARB1-210ENST00000545493 PHTF2Q8N3S3 785 aa22.3■■□□□ 1.16
SCARB1-210ENST00000545493 CYLDQ9NQC7 956 aa22.3■■□□□ 1.16
SCARB1-210ENST00000545493 TLR8Q9NR97 1041 aaKnown RBP22.3■■□□□ 1.16
SCARB1-210ENST00000545493 RAB20Q9NX57 234 aa22.3■■□□□ 1.16
SCARB1-210ENST00000545493 TBC1D14Q9P2M4 693 aa22.3■■□□□ 1.16
SCARB1-210ENST00000545493 AXIN1O15169 862 aa22.29■■□□□ 1.16
SCARB1-210ENST00000545493 APBB3O95704 486 aa22.29■■□□□ 1.16
SCARB1-210ENST00000545493 TBX18O95935 607 aa22.29■■□□□ 1.16
SCARB1-210ENST00000545493 CCDC192P0DO97 292 aa22.29■■□□□ 1.16
SCARB1-210ENST00000545493 ACO1P21399 889 aaKnown RBP22.29■■□□□ 1.16
SCARB1-210ENST00000545493 C2orf27AQ580R0 203 aa22.29■■□□□ 1.16
SCARB1-210ENST00000545493 ANKRD40Q6AI12 368 aa22.29■■□□□ 1.16
SCARB1-210ENST00000545493 ETFBKMTQ8IXQ9 262 aa22.29■■□□□ 1.16
SCARB1-210ENST00000545493 SLC4A11Q8NBS3 891 aa22.29■■□□□ 1.16
SCARB1-210ENST00000545493 SMARCE1Q969G3 411 aa22.29■■□□□ 1.16
SCARB1-210ENST00000545493 OTUB2Q96DC9 234 aa22.29■■□□□ 1.16
SCARB1-210ENST00000545493 TIGD1Q96MW7 591 aa22.29■■□□□ 1.16
SCARB1-210ENST00000545493 TSG101Q99816 390 aa22.29■■□□□ 1.16
SCARB1-210ENST00000545493 NACA2Q9H009 215 aa22.29■■□□□ 1.16
SCARB1-210ENST00000545493 CISHQ9NSE2 258 aa22.29■■□□□ 1.16
SCARB1-210ENST00000545493 RALGAPA1Q6GYQ0 2036 aa22.28■■□□□ 1.16
SCARB1-210ENST00000545493 A0A1W2PQH9 124 aa22.28■■□□□ 1.16
SCARB1-210ENST00000545493 MED19A0JLT2 244 aaPredicted RBP22.28■■□□□ 1.16
SCARB1-210ENST00000545493 PRR5-ARHGAP8B1AHC4 643 aa22.28■■□□□ 1.16
SCARB1-210ENST00000545493 MDM4O15151 490 aa22.28■■□□□ 1.16
SCARB1-210ENST00000545493 STX10O60499 249 aa22.28■■□□□ 1.16
SCARB1-210ENST00000545493 EPN2O95208 641 aa22.28■■□□□ 1.16
SCARB1-210ENST00000545493 KAT7O95251 611 aa22.28■■□□□ 1.16
SCARB1-210ENST00000545493 SMC2O95347 1197 aa22.28■■□□□ 1.16
SCARB1-210ENST00000545493 KIF11P52732 1056 aa22.28■■□□□ 1.16
SCARB1-210ENST00000545493 ARHGAP8P85298 464 aa22.28■■□□□ 1.16
SCARB1-210ENST00000545493 CSRP2Q16527 193 aa22.28■■□□□ 1.16
SCARB1-210ENST00000545493 TCERG1LQ5VWI1 586 aa22.28■■□□□ 1.16
SCARB1-210ENST00000545493 PRR23CQ6ZRP0 262 aa22.28■■□□□ 1.16
SCARB1-210ENST00000545493 CACNA2D4Q7Z3S7 1137 aa22.28■■□□□ 1.16
SCARB1-210ENST00000545493 FAXDC2Q96IV6 333 aa22.28■■□□□ 1.16
SCARB1-210ENST00000545493 PNKPQ96T60 521 aa22.28■■□□□ 1.16
SCARB1-210ENST00000545493 KLF16Q9BXK1 252 aaPredicted RBP22.28■■□□□ 1.16
SCARB1-210ENST00000545493 DUSP16Q9BY84 665 aa22.28■■□□□ 1.16
SCARB1-210ENST00000545493 EBF1Q9UH73 591 aa22.28■■□□□ 1.16
SCARB1-210ENST00000545493 CDV3Q9UKY7 258 aaKnown RBP22.28■■□□□ 1.16
SCARB1-210ENST00000545493 MMP17Q9ULZ9 603 aa22.28■■□□□ 1.16
SCARB1-210ENST00000545493 HOXC11O43248 304 aaPredicted RBP22.27■■□□□ 1.16
SCARB1-210ENST00000545493 HNRNPLP14866 589 aaKnown RBP eCLIP22.27■■□□□ 1.161e-7■■■■□ 23.1
SCARB1-210ENST00000545493 RAD23BP54727 409 aa22.27■■□□□ 1.16
SCARB1-210ENST00000545493 LRRC63Q05C16 580 aa22.27■■□□□ 1.16
SCARB1-210ENST00000545493 TSTD1Q8NFU3 115 aa22.27■■□□□ 1.16
SCARB1-210ENST00000545493 CCDC26Q8TAB7 109 aa22.27■■□□□ 1.16
SCARB1-210ENST00000545493 TATDN2Q93075 761 aa22.27■■□□□ 1.16
SCARB1-210ENST00000545493 SLC35C1Q96A29 364 aa22.27■■□□□ 1.16
SCARB1-210ENST00000545493 ARHGEF4Q9NR80 690 aa22.27■■□□□ 1.16
SCARB1-210ENST00000545493 SPHK2Q9NRA0 654 aa22.27■■□□□ 1.16
SCARB1-210ENST00000545493 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.27■■□□□ 1.16
SCARB1-210ENST00000545493 COQ4Q9Y3A0 265 aa22.27■■□□□ 1.16
SCARB1-210ENST00000545493 APODP05090 189 aa22.26■■□□□ 1.15
SCARB1-210ENST00000545493 CD44P16070 742 aaKnown RBP22.26■■□□□ 1.15
SCARB1-210ENST00000545493 ATXN1P54253 815 aaKnown RBP22.26■■□□□ 1.15
SCARB1-210ENST00000545493 FKBP3Q00688 224 aaKnown RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms