RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 TMEM25Q86YD3 366 aa12.23□□□□□ -0.45
TMEM258-208ENST00000545210 BBS7Q8IWZ6 715 aa12.23□□□□□ -0.45
TMEM258-208ENST00000545210 PIAS4Q8N2W9 510 aaPredicted RBP12.23□□□□□ -0.45
TMEM258-208ENST00000545210 TERB1Q8NA31 727 aa12.23□□□□□ -0.45
TMEM258-208ENST00000545210 OTUB2Q96DC9 234 aa12.23□□□□□ -0.45
TMEM258-208ENST00000545210 ANKRD36BP1Q96IX9 119 aa12.23□□□□□ -0.45
TMEM258-208ENST00000545210 LRIG1Q96JA1 1093 aa12.23□□□□□ -0.45
TMEM258-208ENST00000545210 ZFRQ96KR1 1074 aaKnown RBP12.23□□□□□ -0.45
TMEM258-208ENST00000545210 BBC3Q96PG8 261 aaPredicted RBP12.23□□□□□ -0.45
TMEM258-208ENST00000545210 ACOX2Q99424 681 aa12.23□□□□□ -0.45
TMEM258-208ENST00000545210 SLC6A17Q9H1V8 727 aa12.23□□□□□ -0.45
TMEM258-208ENST00000545210 CD93Q9NPY3 652 aa12.23□□□□□ -0.45
TMEM258-208ENST00000545210 INTS13Q9NVM9 706 aa12.23□□□□□ -0.45
TMEM258-208ENST00000545210 SEL1LQ9UBV2 794 aa12.23□□□□□ -0.45
TMEM258-208ENST00000545210 RAXQ9Y2V3 346 aa12.23□□□□□ -0.45
TMEM258-208ENST00000545210 ACACAQ13085 2346 aa12.23□□□□□ -0.45
TMEM258-208ENST00000545210 ZBTB24O43167 697 aaPredicted RBP12.22□□□□□ -0.45
TMEM258-208ENST00000545210 HOXC11O43248 304 aaPredicted RBP12.22□□□□□ -0.45
TMEM258-208ENST00000545210 EIF5BO60841 1220 aaKnown RBP12.22□□□□□ -0.45
TMEM258-208ENST00000545210 NDUFS2O75306 463 aa12.22□□□□□ -0.45
TMEM258-208ENST00000545210 ZIC2O95409 532 aaPredicted RBP12.22□□□□□ -0.45
TMEM258-208ENST00000545210 TNNC2P02585 160 aa12.22□□□□□ -0.45
TMEM258-208ENST00000545210 GAP43P17677 238 aa12.22□□□□□ -0.45
TMEM258-208ENST00000545210 YWHAQP27348 245 aa12.22□□□□□ -0.45
TMEM258-208ENST00000545210 PREPLQ4J6C6 727 aaPredicted RBP12.22□□□□□ -0.45
TMEM258-208ENST00000545210 SYCP2LQ5T4T6 812 aa12.22□□□□□ -0.45
TMEM258-208ENST00000545210 USP49Q70CQ1 688 aa12.22□□□□□ -0.45
TMEM258-208ENST00000545210 SLCO6A1Q86UG4 719 aa12.22□□□□□ -0.45
TMEM258-208ENST00000545210 CHPFQ8IZ52 775 aa12.22□□□□□ -0.45
TMEM258-208ENST00000545210 IPO4Q8TEX9 1081 aaKnown RBP12.22□□□□□ -0.45
TMEM258-208ENST00000545210 ZNF419Q96HQ0 510 aaPredicted RBP12.22□□□□□ -0.45
TMEM258-208ENST00000545210 EPSTI1Q96J88 318 aa12.22□□□□□ -0.45
TMEM258-208ENST00000545210 KIF2CQ99661 725 aa12.22□□□□□ -0.45
TMEM258-208ENST00000545210 MRPL45Q9BRJ2 306 aaKnown RBP12.22□□□□□ -0.45
TMEM258-208ENST00000545210 FGFBP2Q9BYJ0 223 aa12.22□□□□□ -0.45
TMEM258-208ENST00000545210 SNX25Q9H3E2 840 aa12.22□□□□□ -0.45
TMEM258-208ENST00000545210 DPEP3Q9H4B8 488 aa12.22□□□□□ -0.45
TMEM258-208ENST00000545210 FAM124BQ9H5Z6 455 aaPredicted RBP12.22□□□□□ -0.45
TMEM258-208ENST00000545210 CD248Q9HCU0 757 aa12.22□□□□□ -0.45
TMEM258-208ENST00000545210 SPHK2Q9NRA0 654 aa12.22□□□□□ -0.45
TMEM258-208ENST00000545210 CHORDC1Q9UHD1 332 aaPredicted RBP12.22□□□□□ -0.45
TMEM258-208ENST00000545210 APOBEC2Q9Y235 224 aaKnown RBP12.22□□□□□ -0.45
TMEM258-208ENST00000545210 SH3BP1Q9Y3L3 701 aa12.22□□□□□ -0.45
TMEM258-208ENST00000545210 NME7Q9Y5B8 376 aa12.22□□□□□ -0.45
TMEM258-208ENST00000545210 PCDHB13Q9Y5F0 798 aa12.22□□□□□ -0.45
TMEM258-208ENST00000545210 CLDN5O00501 218 aa12.21□□□□□ -0.45
TMEM258-208ENST00000545210 IRF1P10914 325 aa12.21□□□□□ -0.45
TMEM258-208ENST00000545210 GNSP15586 552 aa12.21□□□□□ -0.45
TMEM258-208ENST00000545210 PTPN1P18031 435 aaKnown RBP12.21□□□□□ -0.45
TMEM258-208ENST00000545210 GNL1P36915 607 aaPredicted RBP12.21□□□□□ -0.45
TMEM258-208ENST00000545210 GRIK2Q13002 908 aa12.21□□□□□ -0.45
TMEM258-208ENST00000545210 HECTD3Q5T447 861 aa12.21□□□□□ -0.45
TMEM258-208ENST00000545210 SDE2Q6IQ49 451 aa12.21□□□□□ -0.45
TMEM258-208ENST00000545210 TOGARAM2Q6ZUX3 1019 aa12.21□□□□□ -0.45
TMEM258-208ENST00000545210 NUP93Q8N1F7 819 aa12.21□□□□□ -0.45
TMEM258-208ENST00000545210 GPD1LQ8N335 351 aa12.21□□□□□ -0.45
TMEM258-208ENST00000545210 PDZD8Q8NEN9 1154 aa12.21□□□□□ -0.45
TMEM258-208ENST00000545210 OR6B3Q8NGW1 331 aa12.21□□□□□ -0.45
TMEM258-208ENST00000545210 FBXO32Q969P5 355 aa12.21□□□□□ -0.45
TMEM258-208ENST00000545210 WBP2Q969T9 261 aa12.21□□□□□ -0.45
TMEM258-208ENST00000545210 DNAJC19Q96DA6 116 aa12.21□□□□□ -0.45
TMEM258-208ENST00000545210 MRGPRX1Q96LB2 322 aa12.21□□□□□ -0.45
TMEM258-208ENST00000545210 B3GNT5Q9BYG0 378 aa12.21□□□□□ -0.45
TMEM258-208ENST00000545210 ZNF518BQ9C0D4 1074 aa12.21□□□□□ -0.45
TMEM258-208ENST00000545210 ELOVL4Q9GZR5 314 aa12.21□□□□□ -0.45
TMEM258-208ENST00000545210 CCSER2Q9H7U1 834 aa12.21□□□□□ -0.45
TMEM258-208ENST00000545210 DNAJC17Q9NVM6 304 aaKnown RBP12.21□□□□□ -0.45
TMEM258-208ENST00000545210 SUSD2Q9UGT4 822 aa12.21□□□□□ -0.45
TMEM258-208ENST00000545210 PCOLCE2Q9UKZ9 415 aa12.21□□□□□ -0.45
TMEM258-208ENST00000545210 STARD13Q9Y3M8 1113 aa12.21□□□□□ -0.45
TMEM258-208ENST00000545210 GTF3C3Q9Y5Q9 886 aa12.21□□□□□ -0.45
TMEM258-208ENST00000545210 RAD54BQ9Y620 910 aa12.21□□□□□ -0.45
TMEM258-208ENST00000545210 APC2O95996 2303 aa12.21□□□□□ -0.46
TMEM258-208ENST00000545210 HELZ2Q9BYK8 2649 aaKnown RBP12.2□□□□□ -0.46
TMEM258-208ENST00000545210 NEDD8-MDP1E9PL57 170 aa12.2□□□□□ -0.46
TMEM258-208ENST00000545210 CBFA2T3O75081 653 aa12.2□□□□□ -0.46
TMEM258-208ENST00000545210 RTN3O95197 1032 aaPredicted RBP12.2□□□□□ -0.46
TMEM258-208ENST00000545210 IDEP14735 1019 aa12.2□□□□□ -0.46
TMEM258-208ENST00000545210 GJB2P29033 226 aa12.2□□□□□ -0.46
TMEM258-208ENST00000545210 SF3A1Q15459 793 aaKnown RBP12.2□□□□□ -0.46
TMEM258-208ENST00000545210 DUOXA2Q1HG44 320 aa12.2□□□□□ -0.46
TMEM258-208ENST00000545210 WDR45BQ5MNZ6 344 aa12.2□□□□□ -0.46
TMEM258-208ENST00000545210 GRAMD4Q6IC98 578 aa12.2□□□□□ -0.46
TMEM258-208ENST00000545210 KIAA1324Q6UXG2 1013 aaKnown RBP12.2□□□□□ -0.46
TMEM258-208ENST00000545210 GLRX5Q86SX6 157 aa12.2□□□□□ -0.46
TMEM258-208ENST00000545210 CBWD2Q8IUF1 395 aa12.2□□□□□ -0.46
TMEM258-208ENST00000545210 SCAMP5Q8TAC9 235 aa12.2□□□□□ -0.46
TMEM258-208ENST00000545210 SETD7Q8WTS6 366 aaKnown RBP12.2□□□□□ -0.46
TMEM258-208ENST00000545210 OVCA2Q8WZ82 227 aa12.2□□□□□ -0.46
TMEM258-208ENST00000545210 FOXJ1Q92949 421 aa12.2□□□□□ -0.46
TMEM258-208ENST00000545210 COL26A1Q96A83 441 aa12.2□□□□□ -0.46
TMEM258-208ENST00000545210 KCNK16Q96T55 309 aa12.2□□□□□ -0.46
TMEM258-208ENST00000545210 IL21RQ9HBE5 538 aa12.2□□□□□ -0.46
TMEM258-208ENST00000545210 OLFML3Q9NRN5 406 aa12.2□□□□□ -0.46
TMEM258-208ENST00000545210 STK17AQ9UEE5 414 aa12.2□□□□□ -0.46
TMEM258-208ENST00000545210 KALRNO60229 2985 aa12.2□□□□□ -0.46
TMEM258-208ENST00000545210 ASH1LQ9NR48 2969 aaKnown RBP12.2□□□□□ -0.46
TMEM258-208ENST00000545210 ZNF233A6NK53 670 aa12.19□□□□□ -0.46
TMEM258-208ENST00000545210 EIF4E1BA6NMX2 242 aaKnown RBP12.19□□□□□ -0.46
TMEM258-208ENST00000545210 WASH3PC4AMC7 463 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms