RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 ELF1P32519 619 aa10□□□□□ -0.81
YBX3-215ENST00000544504 OR1D2P34982 312 aa10□□□□□ -0.81
YBX3-215ENST00000544504 GRIK1P39086 918 aa10□□□□□ -0.81
YBX3-215ENST00000544504 ARHGAP25P42331 645 aa10□□□□□ -0.81
YBX3-215ENST00000544504 ARPP19P56211 112 aa10□□□□□ -0.81
YBX3-215ENST00000544504 RBM10P98175 930 aaKnown RBP10□□□□□ -0.81
YBX3-215ENST00000544504 ROR1Q01973 937 aa10□□□□□ -0.81
YBX3-215ENST00000544504 PTP4A2Q12974 167 aa10□□□□□ -0.81
YBX3-215ENST00000544504 PLD1Q13393 1074 aa10□□□□□ -0.81
YBX3-215ENST00000544504 PTPN20Q4JDL3 420 aa10□□□□□ -0.81
YBX3-215ENST00000544504 PLEKHA7Q6IQ23 1121 aa10□□□□□ -0.81
YBX3-215ENST00000544504 ELMSAN1Q6PJG2 1045 aa10□□□□□ -0.81
YBX3-215ENST00000544504 PRSS55Q6UWB4 352 aaPredicted RBP10□□□□□ -0.81
YBX3-215ENST00000544504 PAQR9Q6ZVX9 377 aa10□□□□□ -0.81
YBX3-215ENST00000544504 RTL10Q7L3V2 364 aa10□□□□□ -0.81
YBX3-215ENST00000544504 ARCQ7LC44 396 aa10□□□□□ -0.81
YBX3-215ENST00000544504 TAS1R1Q7RTX1 841 aa10□□□□□ -0.81
YBX3-215ENST00000544504 PIGZQ86VD9 579 aa10□□□□□ -0.81
YBX3-215ENST00000544504 LRRTM3Q86VH5 581 aa10□□□□□ -0.81
YBX3-215ENST00000544504 SIX6OS1Q8N1H7 587 aa10□□□□□ -0.81
YBX3-215ENST00000544504 SCML4Q8N228 414 aa10□□□□□ -0.81
YBX3-215ENST00000544504 ZNF461Q8TAF7 563 aa10□□□□□ -0.81
YBX3-215ENST00000544504 SLC35G2Q8TBE7 412 aa10□□□□□ -0.81
YBX3-215ENST00000544504 MCRS1Q96EZ8 462 aa10□□□□□ -0.81
YBX3-215ENST00000544504 CNTNAP3BQ96NU0 1288 aa10□□□□□ -0.81
YBX3-215ENST00000544504 CPXM1Q96SM3 734 aa10□□□□□ -0.81
YBX3-215ENST00000544504 NCAPGQ9BPX3 1015 aa10□□□□□ -0.81
YBX3-215ENST00000544504 SELENOOQ9BVL4 669 aa10□□□□□ -0.81
YBX3-215ENST00000544504 VN1R3Q9BXE9 311 aa10□□□□□ -0.81
YBX3-215ENST00000544504 PACSIN1Q9BY11 444 aa10□□□□□ -0.81
YBX3-215ENST00000544504 CNTNAP3Q9BZ76 1288 aa10□□□□□ -0.81
YBX3-215ENST00000544504 LACRTQ9GZZ8 138 aa10□□□□□ -0.81
YBX3-215ENST00000544504 CNGB3Q9NQW8 809 aa10□□□□□ -0.81
YBX3-215ENST00000544504 ENTPD7Q9NQZ7 604 aa10□□□□□ -0.81
YBX3-215ENST00000544504 TMEM51Q9NW97 253 aa10□□□□□ -0.81
YBX3-215ENST00000544504 COMMD8Q9NX08 183 aa10□□□□□ -0.81
YBX3-215ENST00000544504 ABI2Q9NYB9 513 aaPredicted RBP10□□□□□ -0.81
YBX3-215ENST00000544504 DPP7Q9UHL4 492 aa10□□□□□ -0.81
YBX3-215ENST00000544504 CDY1Q9Y6F8 540 aa10□□□□□ -0.81
YBX3-215ENST00000544504 VWA8A3KMH1 1905 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 MACROD2A1Z1Q3 448 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 MTMR11A4FU01 709 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 RCCD1A6NED2 376 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 SIGLEC16A6NMB1 481 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 MYO1FO00160 1098 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 C2CD2LO14523 706 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 ABLIM3O94929 683 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 RTN3O95197 1032 aaPredicted RBP9.99□□□□□ -0.81
YBX3-215ENST00000544504 CXCL14O95715 111 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 LMNAP02545 664 aaKnown RBP9.99□□□□□ -0.81
YBX3-215ENST00000544504 KRT3P12035 628 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 ATF2P15336 505 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 SP100P23497 879 aaPredicted RBP9.99□□□□□ -0.81
YBX3-215ENST00000544504 RRM1P23921 792 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 MAP3K7CLP57077 242 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 GNG11P61952 73 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 ETF1P62495 437 aaKnown RBP9.99□□□□□ -0.81
YBX3-215ENST00000544504 KCNC3Q14003 757 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 EFHC1Q5JVL4 640 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 OR6B2Q6IFH4 312 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 ANKRD54Q6NXT1 300 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 PMF1Q6P1K2 205 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 DCUN1D2Q6PH85 259 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 XYLT1Q86Y38 959 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 SCN4BQ8IWT1 228 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 FEZF2Q8TBJ5 459 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 ZNF564Q8TBZ8 553 aaPredicted RBP9.99□□□□□ -0.81
YBX3-215ENST00000544504 IRGQQ8WZA9 623 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 GOLGA1Q92805 767 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 SPATA17Q96L03 361 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 B3GALT6Q96L58 329 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 NECTIN4Q96NY8 510 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 TMEM209Q96SK2 561 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 SMOQ99835 787 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 NUP85Q9BW27 656 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 FBXO44Q9H4M3 255 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 TMLHEQ9NVH6 421 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 ASNSD1Q9NWL6 643 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 IP6K2Q9UHH9 426 aa9.99□□□□□ -0.81
YBX3-215ENST00000544504 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.98□□□□□ -0.81
YBX3-215ENST00000544504 USP27XA6NNY8 438 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 E5RJQ4 531 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 F8VP50 259 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 LILRB3O75022 631 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 ERBB2P04626 1255 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 OR4Q2P0C623 313 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 HAPLN1P10915 354 aaPredicted RBP9.98□□□□□ -0.81
YBX3-215ENST00000544504 AOC1P19801 751 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 CA8P35219 290 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 SLC1A1P43005 524 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 ALDH1A3P47895 512 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 RGS7P49802 495 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 SLC6A3Q01959 620 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 MAMLD1Q13495 774 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 VEPH1Q14D04 833 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 ACAP1Q15027 740 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 ANGPT1Q15389 498 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 MGAT5BQ3V5L5 792 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 RAB41Q5JT25 222 aa9.98□□□□□ -0.81
YBX3-215ENST00000544504 ZNF569Q5MCW4 686 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms