RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 CA14Q9ULX7 337 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 ADAMTS5Q9UNA0 930 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 ST3GAL5Q9UNP4 418 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 MAN2B2Q9Y2E5 1009 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 CEP83Q9Y592 693 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 EXOC5O00471 708 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 ADAMTS3O15072 1205 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 TMPRSS11DO60235 418 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 CCNT2O60583 730 aaKnown RBP2.78□□□□□ -1.96
YBX3-214ENST00000544501 JTBO76095 146 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 VNN1O95497 513 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 NUDT3O95989 172 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 EGR1P18146 543 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 CTGFP29279 349 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 HSPA7P48741 367 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 RHBDL3P58872 404 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 NHLH1Q02575 133 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 ATP1A4Q13733 1029 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 SMN1Q16637 294 aaKnown RBP2.78□□□□□ -1.96
YBX3-214ENST00000544501 MAPKAPK3Q16644 382 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 MPEG1Q2M385 716 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 SLC5A9Q2M3M2 681 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 C4orf46Q504U0 113 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.78□□□□□ -1.96
YBX3-214ENST00000544501 PCID2Q5JVF3 399 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 AKNAD1Q5T1N1 836 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 ARL6IP4Q66PJ3 421 aaKnown RBP2.78□□□□□ -1.96
YBX3-214ENST00000544501 TLDC1Q6P9B6 456 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 CRTC1Q6UUV9 634 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 PTCHD4Q6ZW05 846 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 USP49Q70CQ1 688 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 PRIMA1Q86XR5 153 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 RASAL3Q86YV0 1011 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 SFTPA1Q8IWL2 248 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 CCDC28AQ8IWP9 274 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 SYTL1Q8IYJ3 562 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 GLIS1Q8NBF1 620 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 NGDNQ8NEJ9 315 aaKnown RBP2.78□□□□□ -1.96
YBX3-214ENST00000544501 KIAA1191Q96A73 305 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 CTHRC1Q96CG8 243 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 ZG16BQ96DA0 208 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 TMEM41AQ96HV5 264 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 PRR25Q96S07 402 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 NUDT22Q9BRQ3 303 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 STK33Q9BYT3 514 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 KLK15Q9H2R5 256 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 CPNE5Q9HCH3 593 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 RXFP3Q9NSD7 469 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 GJB4Q9NTQ9 266 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 ARPP21Q9UBL0 812 aaPredicted RBP2.78□□□□□ -1.96
YBX3-214ENST00000544501 CCNL1Q9UK58 526 aaPredicted RBP2.78□□□□□ -1.96
YBX3-214ENST00000544501 RIMKLBQ9ULI2 386 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 SLC27A6Q9Y2P4 619 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 WNT6Q9Y6F9 365 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 COX11Q9Y6N1 276 aa2.78□□□□□ -1.96
YBX3-214ENST00000544501 FER1L4A9Z1Z3 1794 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 ABHD14A-ACY1A0A1B0GW23 586 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 FAM234BA2RU67 622 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 TARM1B6A8C7 271 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 H7C1Q1 480 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 AGPSO00116 658 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 AP4M1O00189 453 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 PODXLO00592 558 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 ZNF213O14771 459 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 SPRY2O43597 315 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 C1QL1O75973 258 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 NDST3O95803 873 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 GLP2RO95838 553 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 IGLV2-14P01704 120 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 FGAP02671 866 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 HNRNPCP07910 306 aaKnown RBP eCLIP2.77□□□□□ -1.97
YBX3-214ENST00000544501 ARP10275 920 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 CREB1P16220 341 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 ENGP17813 658 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 ABCB4P21439 1286 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 MST1P26927 711 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 SERPINB3P29508 390 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 HTR7P34969 479 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 PPM1AP35813 382 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 TECP42680 631 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 DGKQP52824 942 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 HOXA4Q00056 320 aaPredicted RBP2.77□□□□□ -1.97
YBX3-214ENST00000544501 E2F1Q01094 437 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 NSUN2Q08J23 767 aaKnown RBP eCLIP2.77□□□□□ -1.97
YBX3-214ENST00000544501 GPS1Q13098 491 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 OS9Q13438 667 aaPredicted RBP2.77□□□□□ -1.97
YBX3-214ENST00000544501 ACOX1Q15067 660 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 L1TD1Q5T7N2 865 aaKnown RBP2.77□□□□□ -1.97
YBX3-214ENST00000544501 SUMO4Q6EEV6 95 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 ABLIM2Q6H8Q1 611 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 XRRA1Q6P2D8 792 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 FBXO42Q6P3S6 717 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 FBXO38Q6PIJ6 1188 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 CLEC9AQ6UXN8 241 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 ADGRG3Q86Y34 549 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 SPICE1Q8N0Z3 855 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 METTL25Q8N6Q8 603 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 BOLLQ8N9W6 283 aaKnown RBP2.77□□□□□ -1.97
YBX3-214ENST00000544501 SUN3Q8TAQ9 357 aa2.77□□□□□ -1.97
YBX3-214ENST00000544501 VPS50Q96JG6 964 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms