RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.8■□□□□ 0.44
PTPRO-209ENST00000543886 A0A087WUV0 522 aaPredicted RBP17.79■□□□□ 0.44
PTPRO-209ENST00000543886 H7C0C1 242 aa17.79■□□□□ 0.44
PTPRO-209ENST00000543886 EBAG9O00559 213 aa17.79■□□□□ 0.44
PTPRO-209ENST00000543886 ATP2C2O75185 946 aa17.79■□□□□ 0.44
PTPRO-209ENST00000543886 TGM2P21980 687 aa17.79■□□□□ 0.44
PTPRO-209ENST00000543886 RPL22P35268 128 aaKnown RBP17.79■□□□□ 0.44
PTPRO-209ENST00000543886 ATP5OP48047 213 aa17.79■□□□□ 0.44
PTPRO-209ENST00000543886 MGAT3Q09327 533 aa17.79■□□□□ 0.44
PTPRO-209ENST00000543886 ANKRD20A8PQ5CZ79 823 aa17.79■□□□□ 0.44
PTPRO-209ENST00000543886 EFHC1Q5JVL4 640 aa17.79■□□□□ 0.44
PTPRO-209ENST00000543886 PIGZQ86VD9 579 aa17.79■□□□□ 0.44
PTPRO-209ENST00000543886 ZC3H18Q86VM9 953 aaKnown RBP17.79■□□□□ 0.44
PTPRO-209ENST00000543886 FUKQ8N0W3 1084 aa17.79■□□□□ 0.44
PTPRO-209ENST00000543886 SENP8Q96LD8 212 aa17.79■□□□□ 0.44
PTPRO-209ENST00000543886 ZNF670Q9BS34 389 aa17.79■□□□□ 0.44
PTPRO-209ENST00000543886 MED10Q9BTT4 135 aa17.79■□□□□ 0.44
PTPRO-209ENST00000543886 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.79■□□□□ 0.44
PTPRO-209ENST00000543886 GIT1Q9Y2X7 761 aa17.79■□□□□ 0.44
PTPRO-209ENST00000543886 GMNCA6NCL1 334 aa17.79■□□□□ 0.44
PTPRO-209ENST00000543886 TRAPPC3O43617 180 aa17.79■□□□□ 0.44
PTPRO-209ENST00000543886 CHN1P15882 459 aa17.79■□□□□ 0.44
PTPRO-209ENST00000543886 NPR3P17342 541 aa17.79■□□□□ 0.44
PTPRO-209ENST00000543886 TFE3P19532 575 aaPredicted RBP17.79■□□□□ 0.44
PTPRO-209ENST00000543886 STIP1P31948 543 aaKnown RBP17.79■□□□□ 0.44
PTPRO-209ENST00000543886 ADIGQ0VDE8 80 aa17.79■□□□□ 0.44
PTPRO-209ENST00000543886 KCNA10Q16322 511 aa17.79■□□□□ 0.44
PTPRO-209ENST00000543886 HIF1AQ16665 826 aa17.79■□□□□ 0.44
PTPRO-209ENST00000543886 CCDC38Q502W7 563 aa17.79■□□□□ 0.44
PTPRO-209ENST00000543886 PPP6R3Q5H9R7 873 aaPredicted RBP17.79■□□□□ 0.44
PTPRO-209ENST00000543886 ERMARDQ5T6L9 678 aa17.79■□□□□ 0.44
PTPRO-209ENST00000543886 GSTCDQ8NEC7 633 aa17.79■□□□□ 0.44
PTPRO-209ENST00000543886 MYCBPAPQ8TBZ2 947 aa17.79■□□□□ 0.44
PTPRO-209ENST00000543886 CENPTQ96BT3 561 aa17.79■□□□□ 0.44
PTPRO-209ENST00000543886 CACNG4Q9UBN1 327 aa17.79■□□□□ 0.44
PTPRO-209ENST00000543886 CASP8AP2Q9UKL3 1982 aa17.78■□□□□ 0.44
PTPRO-209ENST00000543886 ARL5CA6NH57 179 aa17.78■□□□□ 0.44
PTPRO-209ENST00000543886 GOLGA8MH3BSY2 632 aa17.78■□□□□ 0.44
PTPRO-209ENST00000543886 CLDN5O00501 218 aa17.78■□□□□ 0.44
PTPRO-209ENST00000543886 GABRDO14764 452 aa17.78■□□□□ 0.44
PTPRO-209ENST00000543886 FAM107AO95990 144 aa17.78■□□□□ 0.44
PTPRO-209ENST00000543886 CCND3P30281 292 aaPredicted RBP17.78■□□□□ 0.44
PTPRO-209ENST00000543886 ARL4CP56559 192 aa17.78■□□□□ 0.44
PTPRO-209ENST00000543886 BCAR1P56945 870 aa17.78■□□□□ 0.44
PTPRO-209ENST00000543886 PDIA2Q13087 525 aaKnown RBP17.78■□□□□ 0.44
PTPRO-209ENST00000543886 CA9Q16790 459 aa17.78■□□□□ 0.44
PTPRO-209ENST00000543886 MDH1BQ5I0G3 518 aa17.78■□□□□ 0.44
PTPRO-209ENST00000543886 ZBED8Q8IZ13 594 aa17.78■□□□□ 0.44
PTPRO-209ENST00000543886 TMEM86AQ8N2M4 240 aa17.78■□□□□ 0.44
PTPRO-209ENST00000543886 PLD5Q8N7P1 536 aa17.78■□□□□ 0.44
PTPRO-209ENST00000543886 ZNF473Q8WTR7 871 aaKnown RBP17.78■□□□□ 0.44
PTPRO-209ENST00000543886 CPT1BQ92523 772 aa17.78■□□□□ 0.44
PTPRO-209ENST00000543886 CENPIQ92674 756 aaPredicted RBP17.78■□□□□ 0.44
PTPRO-209ENST00000543886 ARHGEF2Q92974 986 aaKnown RBP17.78■□□□□ 0.44
PTPRO-209ENST00000543886 HHIPL1Q96JK4 782 aa17.78■□□□□ 0.44
PTPRO-209ENST00000543886 CCT8L2Q96SF2 557 aa17.78■□□□□ 0.44
PTPRO-209ENST00000543886 C11orf84Q9BUA3 381 aaPredicted RBP17.78■□□□□ 0.44
PTPRO-209ENST00000543886 DDX43Q9NXZ2 648 aaKnown RBP17.78■□□□□ 0.44
PTPRO-209ENST00000543886 CTNNAL1Q9UBT7 734 aa17.78■□□□□ 0.44
PTPRO-209ENST00000543886 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.78■□□□□ 0.44
PTPRO-209ENST00000543886 ZNF487B1APH4 448 aa17.78■□□□□ 0.44
PTPRO-209ENST00000543886 SMAPO00193 183 aa17.78■□□□□ 0.44
PTPRO-209ENST00000543886 CDH16O75309 829 aa17.78■□□□□ 0.44
PTPRO-209ENST00000543886 PRKAR2AP13861 404 aaKnown RBP17.78■□□□□ 0.44
PTPRO-209ENST00000543886 IL4RP24394 825 aa17.78■□□□□ 0.44
PTPRO-209ENST00000543886 LHX1P48742 406 aa17.78■□□□□ 0.44
PTPRO-209ENST00000543886 CLCNKBP51801 687 aa17.78■□□□□ 0.44
PTPRO-209ENST00000543886 DSTYKQ6XUX3 929 aa17.78■□□□□ 0.44
PTPRO-209ENST00000543886 FAM149B1Q96BN6 582 aa17.78■□□□□ 0.44
PTPRO-209ENST00000543886 XPO6Q96QU8 1125 aaKnown RBP17.78■□□□□ 0.44
PTPRO-209ENST00000543886 FAM107BQ9H098 131 aa17.78■□□□□ 0.44
PTPRO-209ENST00000543886 AGO3Q9H9G7 860 aaKnown RBP17.78■□□□□ 0.44
PTPRO-209ENST00000543886 VPS37BQ9H9H4 285 aa17.78■□□□□ 0.44
PTPRO-209ENST00000543886 LRRC4Q9HBW1 653 aa17.78■□□□□ 0.44
PTPRO-209ENST00000543886 HEY1Q9Y5J3 304 aa17.78■□□□□ 0.44
PTPRO-209ENST00000543886 ALOX15BO15296 676 aa17.77■□□□□ 0.44
PTPRO-209ENST00000543886 CD52P31358 61 aa17.77■□□□□ 0.44
PTPRO-209ENST00000543886 RAB27AP51159 221 aa17.77■□□□□ 0.44
PTPRO-209ENST00000543886 SCNN1GP51170 649 aa17.77■□□□□ 0.44
PTPRO-209ENST00000543886 BASP1P80723 227 aaKnown RBP17.77■□□□□ 0.44
PTPRO-209ENST00000543886 FASTKD3Q14CZ7 662 aaKnown RBP17.77■□□□□ 0.44
PTPRO-209ENST00000543886 CCDC142Q17RM4 750 aa17.77■□□□□ 0.44
PTPRO-209ENST00000543886 HP1BP3Q5SSJ5 553 aaPredicted RBP17.77■□□□□ 0.44
PTPRO-209ENST00000543886 ANKRD22Q5VYY1 191 aa17.77■□□□□ 0.44
PTPRO-209ENST00000543886 SLC9A4Q6AI14 798 aa17.77■□□□□ 0.44
PTPRO-209ENST00000543886 AGMOQ6ZNB7 445 aa17.77■□□□□ 0.44
PTPRO-209ENST00000543886 B4GALNT4Q76KP1 1039 aa17.77■□□□□ 0.44
PTPRO-209ENST00000543886 EXOC3L1Q86VI1 746 aa17.77■□□□□ 0.44
PTPRO-209ENST00000543886 TAB3Q8N5C8 712 aaPredicted RBP17.77■□□□□ 0.44
PTPRO-209ENST00000543886 PQLC3Q8N755 202 aa17.77■□□□□ 0.44
PTPRO-209ENST00000543886 NAT8LQ8N9F0 302 aa17.77■□□□□ 0.44
PTPRO-209ENST00000543886 PCDH19Q8TAB3 1148 aa17.77■□□□□ 0.44
PTPRO-209ENST00000543886 PHACTR1Q9C0D0 580 aa17.77■□□□□ 0.44
PTPRO-209ENST00000543886 DHX35Q9H5Z1 703 aaKnown RBP17.77■□□□□ 0.44
PTPRO-209ENST00000543886 LGALS13Q9UHV8 139 aa17.77■□□□□ 0.44
PTPRO-209ENST00000543886 AP4E1Q9UPM8 1137 aa17.77■□□□□ 0.44
PTPRO-209ENST00000543886 CENPFP49454 3210 aa17.77■□□□□ 0.44
PTPRO-209ENST00000543886 EXOC1LA0A1B0GW35 172 aa17.76■□□□□ 0.43
PTPRO-209ENST00000543886 TMEM88BA6NKF7 163 aa17.76■□□□□ 0.43
PTPRO-209ENST00000543886 FAM200BP0CF97 657 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms