RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 TUFT1Q9NNX1 390 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 SELENONQ9NZV5 590 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 THEGQ9P2T0 379 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 SRP68Q9UHB9 627 aaKnown RBP13.15□□□□□ -0.3
SMG8-202ENST00000543872 HERC5Q9UII4 1024 aaKnown RBP13.15□□□□□ -0.3
SMG8-202ENST00000543872 PLLPQ9Y342 182 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 STK24Q9Y6E0 443 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 ADAMTSL3P82987 1691 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 UGT1A9O60656 530 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 COL6A2P12110 1019 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 HOXD11P31277 338 aaPredicted RBP13.15□□□□□ -0.3
SMG8-202ENST00000543872 SREBF1P36956 1147 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 NR1H2P55055 460 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 PEX3P56589 373 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 IGBP1P78318 339 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 MROH9Q5TGP6 573 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 C16orf46Q6P387 395 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 C16orf87Q6PH81 154 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 DCUN1D2Q6PH85 259 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 HAUS6Q7Z4H7 955 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 NDUFAF2Q8N183 169 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 IRGQQ8WZA9 623 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 JADE3Q92613 823 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 MPHOSPH6Q99547 160 aaKnown RBP13.15□□□□□ -0.3
SMG8-202ENST00000543872 WDR18Q9BV38 432 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 UGT1A7Q9HAW7 530 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 UGT1A10Q9HAW8 530 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 UGT1A8Q9HAW9 530 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 MRPL47Q9HD33 250 aaKnown RBP13.15□□□□□ -0.3
SMG8-202ENST00000543872 GPRC5CQ9NQ84 441 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 BTG4Q9NY30 223 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 UTP6Q9NYH9 597 aaKnown RBP13.15□□□□□ -0.3
SMG8-202ENST00000543872 SERPINB13Q9UIV8 391 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 CEPT1Q9Y6K0 416 aa13.15□□□□□ -0.3
SMG8-202ENST00000543872 COL22A1Q8NFW1 1626 aaPredicted RBP13.14□□□□□ -0.31
SMG8-202ENST00000543872 SDR42E2A6NKP2 422 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 H3BNX3 289 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 CFLARO15519 480 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 PTP4A2Q12974 167 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 THOC7Q6I9Y2 204 aaKnown RBP13.14□□□□□ -0.31
SMG8-202ENST00000543872 SLC2A7Q6PXP3 512 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 SV2AQ7L0J3 742 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 SLC44A1Q8WWI5 657 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 KIFC3Q9BVG8 833 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 ARMC7Q9H6L4 198 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 CAAP1Q9H8G2 361 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 XAB2Q9HCS7 855 aaKnown RBP13.14□□□□□ -0.31
SMG8-202ENST00000543872 RSL24D1Q9UHA3 163 aaKnown RBP13.14□□□□□ -0.31
SMG8-202ENST00000543872 TMED5Q9Y3A6 229 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 UBE4BO95155 1302 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 TMEM150BA6NC51 233 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 SPTLC1O15269 473 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 ITM2AO43736 263 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 AP1G1O43747 822 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 GSTT2P0CG29 244 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 GSTT2BP0CG30 244 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 NOVP48745 357 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 SMAD1Q15797 465 aaKnown RBP13.14□□□□□ -0.31
SMG8-202ENST00000543872 KCNT1Q5JUK3 1230 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 RARS2Q5T160 578 aaKnown RBP13.14□□□□□ -0.31
SMG8-202ENST00000543872 SPOPLQ6IQ16 392 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 RNF169Q8NCN4 708 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 GRIN3AQ8TCU5 1115 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 TRIM11Q96F44 468 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 DRG1Q9Y295 367 aaKnown RBP13.14□□□□□ -0.31
SMG8-202ENST00000543872 NHSL1Q5SYE7 1610 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 MAST2Q6P0Q8 1798 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 E9PBE3 544 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 EIF3FO00303 357 aaPredicted RBP13.14□□□□□ -0.31
SMG8-202ENST00000543872 NOP56O00567 594 aaKnown RBP13.14□□□□□ -0.31
SMG8-202ENST00000543872 KRT38O76015 456 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 RXRGP48443 463 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 PRELPP51888 382 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 TBCCQ15814 346 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 PCGF5Q86SE9 256 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 LRRC43Q8N309 656 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 BBS5Q8N3I7 341 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 DDI1Q8WTU0 396 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 CRYGNQ8WXF5 182 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 RSPH1Q8WYR4 309 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 TCHPQ9BT92 498 aa13.14□□□□□ -0.31
SMG8-202ENST00000543872 PAIP1Q9H074 479 aaKnown RBP13.14□□□□□ -0.31
SMG8-202ENST00000543872 ARFGEF1Q9Y6D6 1849 aa13.13□□□□□ -0.31
SMG8-202ENST00000543872 CXorf49A8MYA2 514 aaPredicted RBP13.13□□□□□ -0.31
SMG8-202ENST00000543872 AIM2O14862 343 aa13.13□□□□□ -0.31
SMG8-202ENST00000543872 DENRO43583 198 aaKnown RBP13.13□□□□□ -0.31
SMG8-202ENST00000543872 CST8O60676 142 aa13.13□□□□□ -0.31
SMG8-202ENST00000543872 SIN3BO75182 1162 aa13.13□□□□□ -0.31
SMG8-202ENST00000543872 KRT37O76014 449 aa13.13□□□□□ -0.31
SMG8-202ENST00000543872 SNRPAP09012 282 aaKnown RBP13.13□□□□□ -0.31
SMG8-202ENST00000543872 IDO1P14902 403 aa13.13□□□□□ -0.31
SMG8-202ENST00000543872 PORP16435 677 aaPredicted RBP13.13□□□□□ -0.31
SMG8-202ENST00000543872 AOC1P19801 751 aa13.13□□□□□ -0.31
SMG8-202ENST00000543872 RPL10AP62906 217 aaKnown RBP13.13□□□□□ -0.31
SMG8-202ENST00000543872 CDKL1Q00532 357 aa13.13□□□□□ -0.31
SMG8-202ENST00000543872 OGFRL1Q5TC84 451 aaPredicted RBP13.13□□□□□ -0.31
SMG8-202ENST00000543872 POTEHQ6S545 545 aa13.13□□□□□ -0.31
SMG8-202ENST00000543872 FRMD7Q6ZUT3 714 aa13.13□□□□□ -0.31
SMG8-202ENST00000543872 UNC45BQ8IWX7 931 aa13.13□□□□□ -0.31
SMG8-202ENST00000543872 ZFPM1Q8IX07 1006 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms