RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 HNRNPA1P09651 372 aaKnown RBP eCLIP8.32□□□□□ -1.08
TRIM59-208ENST00000543469 MATKP42679 507 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 GUCY2FP51841 1108 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 CDH8P55286 799 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 TBX4P57082 545 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 NME3Q13232 169 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 GPR17Q13304 367 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 MTF1Q14872 753 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 ZBTB6Q15916 424 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 TFDP3Q5H9I0 405 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 HGSNATQ68CP4 663 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 CES5AQ6NT32 575 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 EMBQ6PCB8 327 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 CCDC91Q7Z6B0 441 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 NIPA2Q8N8Q9 360 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 LNX1Q8TBB1 728 aaPredicted RBP8.32□□□□□ -1.08
TRIM59-208ENST00000543469 UCMAQ8WVF2 138 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 VAT1Q99536 393 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 OSBPL8Q9BZF1 889 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 APOBEC3GQ9HC16 384 aaKnown RBP8.32□□□□□ -1.08
TRIM59-208ENST00000543469 DDIT4Q9NX09 232 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 COX16Q9P0S2 106 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 SAMD15Q9P1V8 674 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 PAK5Q9P286 719 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 TBX21Q9UL17 535 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.32□□□□□ -1.08
TRIM59-208ENST00000543469 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.32□□□□□ -1.08
TRIM59-208ENST00000543469 TTLL13PA6NNM8 815 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 CTGFP29279 349 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 ATP5C1P36542 298 aaKnown RBP8.32□□□□□ -1.08
TRIM59-208ENST00000543469 FDFT1P37268 417 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 RENBPP51606 427 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 YWHAGP61981 247 aaKnown RBP eCLIP8.32□□□□□ -1.08
TRIM59-208ENST00000543469 HTRA3P83110 453 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 PIGZQ86VD9 579 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 TNS4Q8IZW8 715 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 MMGT1Q8N4V1 131 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 FAM172AQ8WUF8 416 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 TBC1D31Q96DN5 1066 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 SCLYQ96I15 445 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 IGSF21Q96ID5 467 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 ZFP42Q96MM3 310 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 SRPK1Q96SB4 655 aaKnown RBP8.32□□□□□ -1.08
TRIM59-208ENST00000543469 AGO3Q9H9G7 860 aaKnown RBP8.32□□□□□ -1.08
TRIM59-208ENST00000543469 CDHR5Q9HBB8 845 aa8.32□□□□□ -1.08
TRIM59-208ENST00000543469 OAZ2O95190 189 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 SOWAHAQ2M3V2 549 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 KAZNQ674X7 775 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 RWDD4Q6NW29 188 aaKnown RBP8.31□□□□□ -1.08
TRIM59-208ENST00000543469 MON1BQ7L1V2 547 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 LMO3Q8TAP4 145 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 CASP10Q92851 521 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 SLC4A5Q9BY07 1137 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 SP110Q9HB58 689 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 USP18Q9UMW8 372 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 MBL2P11226 248 aaPredicted RBP8.31□□□□□ -1.08
TRIM59-208ENST00000543469 CTNNA1P35221 906 aaKnown RBP8.31□□□□□ -1.08
TRIM59-208ENST00000543469 EIF3BP55884 814 aaKnown RBP8.31□□□□□ -1.08
TRIM59-208ENST00000543469 MAMLD1Q13495 774 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 GPIHBP1Q8IV16 184 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 ZSWIM2Q8NEG5 633 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 PLD4Q96BZ4 506 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 SPATA17Q96L03 361 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 ZCWPW1Q9H0M4 648 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 KIF9Q9HAQ2 790 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 CLIC5Q9NZA1 410 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 SIX4Q9UIU6 781 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 LRRC37A2A6NM11 1700 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 RLFQ13129 1914 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 ZNF487B1APH4 448 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 ABLIM1O14639 778 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 USP17L7P0C7H9 530 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 CCDC130P13994 396 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 PAMP19021 973 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 BDNFP23560 247 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 NNTQ13423 1086 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 PPP6R3Q5H9R7 873 aaPredicted RBP8.31□□□□□ -1.08
TRIM59-208ENST00000543469 COLGALT2Q8IYK4 626 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 EIF1ADQ8N9N8 165 aaKnown RBP8.31□□□□□ -1.08
TRIM59-208ENST00000543469 IFT81Q8WYA0 676 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 ARHGEF26Q96DR7 871 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 ULBP1Q9BZM6 244 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 XYLT2Q9H1B5 865 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 NRDE2Q9H7Z3 1164 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 TBC1D14Q9P2M4 693 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 ANAPC5Q9UJX4 755 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 GALTP07902 379 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 PLEKP08567 350 aaPredicted RBP8.31□□□□□ -1.08
TRIM59-208ENST00000543469 FGFR1P11362 822 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 CES1P23141 567 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 AVPR1AP37288 418 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 GARSP41250 739 aaKnown RBP8.31□□□□□ -1.08
TRIM59-208ENST00000543469 BRCC3P46736 316 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 GABRB2P47870 512 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 SLC11A1P49279 550 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 ATP11AP98196 1134 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 FAAP100Q0VG06 881 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 SLC25A52Q3SY17 297 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 TMEM63BQ5T3F8 832 aa8.31□□□□□ -1.08
TRIM59-208ENST00000543469 CHSY1Q86X52 802 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms