RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 EFCAB14O75071 495 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 SPAG6O75602 509 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 PCDH8O95206 1070 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 GZMAP12544 262 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 NAT1P18440 290 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 IL4RP24394 825 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 SERPINB9P50453 376 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 CREMQ03060 361 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 EIF2B5Q13144 721 aaKnown RBP7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 ITGA7Q13683 1181 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 DUSP28Q4G0W2 176 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 NOMO2Q5JPE7 1267 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 AARS2Q5JTZ9 985 aaKnown RBP7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 ACBD5Q5T8D3 534 aaPredicted RBP7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 MRNIPQ6NTE8 343 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 TTI2Q6NXR4 508 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 MAP4K3Q8IVH8 894 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 KIAA0319LQ8IZA0 1049 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 KIRREL3Q8IZU9 778 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 FAM71DQ8N9W8 422 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 THOC1Q96FV9 657 aaKnown RBP7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 SERPINB11Q96P15 392 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 APOL5Q9BWW9 433 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 CD274Q9NZQ7 290 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 PLAGL2Q9UPG8 496 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 CHMP2BQ9UQN3 213 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 AAR2Q9Y312 384 aaKnown RBP7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 ZNF711Q9Y462 761 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 UBIAD1Q9Y5Z9 338 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 E2F6O75461 281 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 ADH1AP07327 375 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 MAGOHP61326 146 aaKnown RBP7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 CENPCQ03188 943 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 ADIGQ0VDE8 80 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 INAQ16352 499 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 SPDYAQ5MJ70 313 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 ZBTB41Q5SVQ8 909 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 SLC44A2Q8IWA5 706 aaPredicted RBP7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 PURBQ96QR8 312 aaKnown RBP7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 FRMD8Q9BZ67 464 aaPredicted RBP7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 FOXP3Q9BZS1 431 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 SEMA6BQ9H3T3 888 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 MLXIPLQ9NP71 852 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 SCUBE2Q9NQ36 999 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 PFDN2Q9UHV9 154 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 USP20Q9Y2K6 914 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 SPTLC1O15269 473 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 PSTPIP1O43586 416 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 RHOBTB1O94844 696 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 PRMT2P55345 433 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 KCNT1Q5JUK3 1230 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 IQCF2Q8IXL9 164 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 GSPT2Q8IYD1 628 aaKnown RBP7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 USP38Q8NB14 1042 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 ZNF507Q8TCN5 953 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 RXFP2Q8WXD0 754 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 IL17RAQ96F46 866 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 C9orf72Q96LT7 481 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 ASPSCR1Q9BZE9 553 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 BRD9Q9H8M2 597 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 FAM95CA0A1B0GW59 222 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 MGEA5O60502 916 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 USP2O75604 605 aaPredicted RBP7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 CD52P31358 61 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 FDFT1P37268 417 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 GJA8P48165 433 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 PPP3CCP48454 512 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 NUMBP49757 651 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 YWHAZP63104 245 aaKnown RBP7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 NFKB2Q00653 900 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 TRADDQ15628 312 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 BTNL9Q6UXG8 535 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 LBX2Q6XYB7 198 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 RRM2BQ7LG56 351 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 DSG4Q86SJ6 1040 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 AGR3Q8TD06 166 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 SLC2A14Q8TDB8 520 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 ZBTB45Q96K62 511 aaPredicted RBP7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 UROC1Q96N76 676 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 TEX12Q9BXU0 123 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 DCLK3Q9C098 648 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 TMEM134Q9H6X4 195 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 KRT84Q9NSB2 600 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 HPSEQ9Y251 543 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 GTPBP10A4D1E9 387 aaKnown RBP7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 SPECC1L-ADORA2AF8WAN1 911 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 SLC9A3R1O14745 358 aaPredicted RBP7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 MEIS2O14770 477 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 OPHN1O60890 802 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 ITGALP20701 1170 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 CSE1LP55060 971 aaKnown RBP7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 EFTUD2Q15029 972 aaKnown RBP eCLIP7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 FAM133BQ5BKY9 247 aaKnown RBP7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 EMC1Q8N766 993 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 ZNF557Q8N988 423 aaPredicted RBP7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 TC2NQ8N9U0 490 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 SH3GL1Q99961 368 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 MCM8Q9UJA3 840 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 A0A087X0T9 212 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms