RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 CDKAL1Q5VV42 579 aa17.12■□□□□ 0.33
CIT-212ENST00000543239 TRIM68Q6AZZ1 485 aa17.12■□□□□ 0.33
CIT-212ENST00000543239 KLHDC10Q6PID8 442 aa17.12■□□□□ 0.33
CIT-212ENST00000543239 CPA6Q8N4T0 437 aa17.12■□□□□ 0.33
CIT-212ENST00000543239 TTC16Q8NEE8 873 aa17.12■□□□□ 0.33
CIT-212ENST00000543239 TFAP2BQ92481 460 aa17.12■□□□□ 0.33
CIT-212ENST00000543239 ZFRQ96KR1 1074 aaKnown RBP17.12■□□□□ 0.33
CIT-212ENST00000543239 NACA2Q9H009 215 aa17.12■□□□□ 0.33
CIT-212ENST00000543239 SMPD4Q9NXE4 827 aa17.12■□□□□ 0.33
CIT-212ENST00000543239 CLIC5Q9NZA1 410 aa17.12■□□□□ 0.33
CIT-212ENST00000543239 NDRG2Q9UN36 371 aaKnown RBP17.12■□□□□ 0.33
CIT-212ENST00000543239 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.12■□□□□ 0.33
CIT-212ENST00000543239 WNT6Q9Y6F9 365 aa17.12■□□□□ 0.33
CIT-212ENST00000543239 WDFY4Q6ZS81 3184 aa17.11■□□□□ 0.33
CIT-212ENST00000543239 SLC9A3R1O14745 358 aaPredicted RBP17.11■□□□□ 0.33
CIT-212ENST00000543239 KRT5P13647 590 aa17.11■□□□□ 0.33
CIT-212ENST00000543239 ARSAP15289 507 aa17.11■□□□□ 0.33
CIT-212ENST00000543239 PGFP49763 221 aa17.11■□□□□ 0.33
CIT-212ENST00000543239 FZD5Q13467 585 aa17.11■□□□□ 0.33
CIT-212ENST00000543239 MEA1Q16626 185 aa17.11■□□□□ 0.33
CIT-212ENST00000543239 C11orf57Q6ZUT1 292 aaPredicted RBP17.11■□□□□ 0.33
CIT-212ENST00000543239 TADA2BQ86TJ2 420 aa17.11■□□□□ 0.33
CIT-212ENST00000543239 ARHGAP18Q8N392 663 aa17.11■□□□□ 0.33
CIT-212ENST00000543239 TTC8Q8TAM2 541 aa17.11■□□□□ 0.33
CIT-212ENST00000543239 KCTD13Q8WZ19 329 aa17.11■□□□□ 0.33
CIT-212ENST00000543239 CDK5RAP1Q96SZ6 601 aaKnown RBP17.11■□□□□ 0.33
CIT-212ENST00000543239 ZSWIM1Q9BR11 485 aa17.11■□□□□ 0.33
CIT-212ENST00000543239 IER2Q9BTL4 223 aa17.11■□□□□ 0.33
CIT-212ENST00000543239 ECT2Q9H8V3 914 aa17.11■□□□□ 0.33
CIT-212ENST00000543239 NMUR1Q9HB89 426 aa17.11■□□□□ 0.33
CIT-212ENST00000543239 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.11■□□□□ 0.33
CIT-212ENST00000543239 OSER1Q9NX31 292 aa17.11■□□□□ 0.33
CIT-212ENST00000543239 CFAP97Q9P2B7 532 aa17.11■□□□□ 0.33
CIT-212ENST00000543239 NAGPAQ9UK23 515 aa17.11■□□□□ 0.33
CIT-212ENST00000543239 A0A1W2PQH9 124 aa17.1■□□□□ 0.33
CIT-212ENST00000543239 E2F8A0AVK6 867 aa17.1■□□□□ 0.33
CIT-212ENST00000543239 OTOL1A6NHN0 477 aaPredicted RBP17.1■□□□□ 0.33
CIT-212ENST00000543239 M0QYV0 167 aa17.1■□□□□ 0.33
CIT-212ENST00000543239 TULP2O00295 520 aa17.1■□□□□ 0.33
CIT-212ENST00000543239 NFATC1O95644 943 aa17.1■□□□□ 0.33
CIT-212ENST00000543239 BRD2P25440 801 aaKnown RBP17.1■□□□□ 0.33
CIT-212ENST00000543239 ATP5C1P36542 298 aaKnown RBP17.1■□□□□ 0.33
CIT-212ENST00000543239 PLA2G5P39877 138 aa17.1■□□□□ 0.33
CIT-212ENST00000543239 TKTL1P51854 596 aa17.1■□□□□ 0.33
CIT-212ENST00000543239 MYL5Q02045 173 aa17.1■□□□□ 0.33
CIT-212ENST00000543239 NHLH1Q02575 133 aa17.1■□□□□ 0.33
CIT-212ENST00000543239 NR1H3Q13133 447 aa17.1■□□□□ 0.33
CIT-212ENST00000543239 PM20D1Q6GTS8 502 aa17.1■□□□□ 0.33
CIT-212ENST00000543239 GJB7Q6PEY0 223 aa17.1■□□□□ 0.33
CIT-212ENST00000543239 TXNDC11Q6PKC3 985 aa17.1■□□□□ 0.33
CIT-212ENST00000543239 SCD5Q86SK9 330 aa17.1■□□□□ 0.33
CIT-212ENST00000543239 SCML4Q8N228 414 aa17.1■□□□□ 0.33
CIT-212ENST00000543239 UBA3Q8TBC4 463 aa17.1■□□□□ 0.33
CIT-212ENST00000543239 SHC3Q92529 594 aa17.1■□□□□ 0.33
CIT-212ENST00000543239 LRRC4Q9HBW1 653 aa17.1■□□□□ 0.33
CIT-212ENST00000543239 SIX2Q9NPC8 291 aa17.1■□□□□ 0.33
CIT-212ENST00000543239 TBC1D14Q9P2M4 693 aa17.1■□□□□ 0.33
CIT-212ENST00000543239 F5P12259 2224 aa17.09■□□□□ 0.33
CIT-212ENST00000543239 PES1O00541 588 aaKnown RBP17.09■□□□□ 0.33
CIT-212ENST00000543239 MED7O43513 233 aa17.09■□□□□ 0.33
CIT-212ENST00000543239 ZBED1O96006 694 aa17.09■□□□□ 0.33
CIT-212ENST00000543239 RALAP11233 206 aa17.09■□□□□ 0.33
CIT-212ENST00000543239 RARGP13631 454 aa17.09■□□□□ 0.33
CIT-212ENST00000543239 TYRO3Q06418 890 aa17.09■□□□□ 0.33
CIT-212ENST00000543239 GOLGA8FQ08AF8 430 aa17.09■□□□□ 0.33
CIT-212ENST00000543239 GOLGA8DPQ0D2H9 430 aa17.09■□□□□ 0.33
CIT-212ENST00000543239 LRRC32Q14392 662 aa17.09■□□□□ 0.33
CIT-212ENST00000543239 ANGPT1Q15389 498 aa17.09■□□□□ 0.33
CIT-212ENST00000543239 DGKKQ5KSL6 1271 aa17.09■□□□□ 0.33
CIT-212ENST00000543239 C1orf210Q8IVY1 113 aa17.09■□□□□ 0.33
CIT-212ENST00000543239 SLC35F5Q8WV83 523 aa17.09■□□□□ 0.33
CIT-212ENST00000543239 EXOC4Q96A65 974 aa17.09■□□□□ 0.33
CIT-212ENST00000543239 OTUB2Q96DC9 234 aa17.09■□□□□ 0.33
CIT-212ENST00000543239 FAM122AQ96E09 287 aa17.09■□□□□ 0.33
CIT-212ENST00000543239 CHRDQ9H2X0 955 aa17.09■□□□□ 0.33
CIT-212ENST00000543239 SH3BP1Q9Y3L3 701 aa17.09■□□□□ 0.33
CIT-212ENST00000543239 BECN2A8MW95 431 aa17.08■□□□□ 0.32
CIT-212ENST00000543239 H0Y858 1186 aa17.08■□□□□ 0.32
CIT-212ENST00000543239 TRDMT1O14717 391 aaKnown RBP17.08■□□□□ 0.32
CIT-212ENST00000543239 TPM2P07951 284 aa17.08■□□□□ 0.32
CIT-212ENST00000543239 CHRNB1P11230 501 aa17.08■□□□□ 0.32
CIT-212ENST00000543239 PTMSP20962 102 aa17.08■□□□□ 0.32
CIT-212ENST00000543239 GJA4P35212 333 aa17.08■□□□□ 0.32
CIT-212ENST00000543239 APBA1Q02410 837 aa17.08■□□□□ 0.32
CIT-212ENST00000543239 ADIGQ0VDE8 80 aa17.08■□□□□ 0.32
CIT-212ENST00000543239 PON2Q15165 354 aa17.08■□□□□ 0.32
CIT-212ENST00000543239 ARHGAP44Q17R89 818 aa17.08■□□□□ 0.32
CIT-212ENST00000543239 C10orf120Q5SQS8 335 aa17.08■□□□□ 0.32
CIT-212ENST00000543239 CAVIN1Q6NZI2 390 aaKnown RBP17.08■□□□□ 0.32
CIT-212ENST00000543239 SIX6OS1Q8N1H7 587 aa17.08■□□□□ 0.32
CIT-212ENST00000543239 SECISBP2LQ93073 1101 aaKnown RBP17.08■□□□□ 0.32
CIT-212ENST00000543239 CHFRQ96EP1 664 aa17.08■□□□□ 0.32
CIT-212ENST00000543239 HSFY1Q96LI6 401 aa17.08■□□□□ 0.32
CIT-212ENST00000543239 KLF16Q9BXK1 252 aaPredicted RBP17.08■□□□□ 0.32
CIT-212ENST00000543239 ULBP1Q9BZM6 244 aa17.08■□□□□ 0.32
CIT-212ENST00000543239 NAT10Q9H0A0 1025 aaKnown RBP17.08■□□□□ 0.32
CIT-212ENST00000543239 LINC00597Q9H2U6 94 aa17.08■□□□□ 0.32
CIT-212ENST00000543239 LMAN1LQ9HAT1 526 aa17.08■□□□□ 0.32
CIT-212ENST00000543239 CNGB3Q9NQW8 809 aa17.08■□□□□ 0.32
CIT-212ENST00000543239 FANCLQ9NW38 375 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms