RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 RPL13P26373 211 aaKnown RBP5.48□□□□□ -1.53
CLIP1-217ENST00000543205 TNFSF9P41273 254 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 SCNN1GP51170 649 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 CYP2J2P51589 502 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 ODF1Q14990 250 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 PCBP2Q15366 365 aaKnown RBP eCLIP5.48□□□□□ -1.53
CLIP1-217ENST00000543205 ZBTB41Q5SVQ8 909 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 CAVIN1Q6NZI2 390 aaKnown RBP5.48□□□□□ -1.53
CLIP1-217ENST00000543205 LRRC55Q6ZSA7 311 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 SLC41A1Q8IVJ1 513 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 CD302Q8IX05 232 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 TMEM192Q8IY95 271 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 ADSSL1Q8N142 457 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 GPD1LQ8N335 351 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 CPA6Q8N4T0 437 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 XXYLT1Q8NBI6 393 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 DHTKD1Q96HY7 919 aaPredicted RBP5.48□□□□□ -1.53
CLIP1-217ENST00000543205 TNIP3Q96KP6 325 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 SNX27Q96L92 541 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 TGS1Q96RS0 853 aaKnown RBP5.48□□□□□ -1.53
CLIP1-217ENST00000543205 CRB3Q9BUF7 120 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 KCTD10Q9H3F6 313 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 PLEKHA5Q9HAU0 1116 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 RC3H2Q9HBD1 1191 aaKnown RBP5.48□□□□□ -1.53
CLIP1-217ENST00000543205 KIAA1586Q9HCI6 787 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 TCF7L1Q9HCS4 588 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 ALG13Q9NP73 1137 aaKnown RBP5.48□□□□□ -1.53
CLIP1-217ENST00000543205 TBC1D13Q9NVG8 400 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 CPSF3Q9UKF6 684 aaKnown RBP5.48□□□□□ -1.53
CLIP1-217ENST00000543205 GPR52Q9Y2T5 361 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 PCDHB12Q9Y5F1 795 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 TTC3P53804 2025 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 TMEM265A0A087WTH1 108 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 SMIM28A0A1B0GU29 152 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 ZNF233A6NK53 670 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 TTC36A6NLP5 189 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 LACTBL1A8MY62 500 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 INPPL1O15357 1258 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 SUSD5O60279 629 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 FAM189A1O60320 539 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 ZC3H11AO75152 810 aaKnown RBP eCLIP5.47□□□□□ -1.53
CLIP1-217ENST00000543205 MTA2O94776 668 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 IL18RAPO95256 599 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 NR3C1P04150 777 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 NCAM1P13591 858 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 CAPN3P20807 821 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 CD68P34810 354 aaPredicted RBP5.47□□□□□ -1.53
CLIP1-217ENST00000543205 CTNNB1P35222 781 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 BMPR1AP36894 532 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 STT3AP46977 705 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 ALDH7A1P49419 539 aaKnown RBP5.47□□□□□ -1.53
CLIP1-217ENST00000543205 TAP1Q03518 808 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 GRIK3Q13003 919 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 ADAM9Q13443 819 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 KLHL40Q2TBA0 621 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 GLRA4Q5JXX5 417 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 LMBRD2Q68DH5 695 aaPredicted RBP5.47□□□□□ -1.53
CLIP1-217ENST00000543205 KLHL10Q6JEL2 608 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 SASS6Q6UVJ0 657 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 ALKAL1Q6UXT8 129 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 ZNF280BQ86YH2 543 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 C12orf56Q8IXR9 622 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 NELFBQ8WX92 580 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 ARNTL2Q8WYA1 636 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 P2RX5Q93086 422 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 ZNF558Q96NG5 402 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 SAMD11Q96NU1 681 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 CWH43Q9H720 699 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 CERS4Q9HA82 394 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 TRIM39Q9HCM9 518 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 SMYD2Q9NRG4 433 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 SLC38A7Q9NVC3 462 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 MIOSQ9NXC5 875 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 RRN3Q9NYV6 651 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 RBAKQ9NYW8 714 aaPredicted RBP5.47□□□□□ -1.53
CLIP1-217ENST00000543205 MTUS1Q9ULD2 1270 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 TRAF3IP3Q9Y228 551 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 SPEF1Q9Y4P9 236 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 TNPO3Q9Y5L0 923 aaKnown RBP5.47□□□□□ -1.53
CLIP1-217ENST00000543205 SPTBN5Q9NRC6 3674 aaKnown RBP5.47□□□□□ -1.53
CLIP1-217ENST00000543205 TTC26A0AVF1 554 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 PTGESO14684 152 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 CETN3O15182 167 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 DDX3YO15523 660 aaKnown RBP5.47□□□□□ -1.53
CLIP1-217ENST00000543205 XPOTO43592 962 aaKnown RBP5.47□□□□□ -1.53
CLIP1-217ENST00000543205 EIF4EBP3O60516 100 aaPredicted RBP5.47□□□□□ -1.53
CLIP1-217ENST00000543205 DDHD2O94830 711 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 INMTO95050 263 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 LETM1O95202 739 aaPredicted RBP5.47□□□□□ -1.53
CLIP1-217ENST00000543205 ALDH2P05091 517 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 KCNE1P15382 129 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 BMP6P22004 513 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 NR2F2P24468 414 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 CCNE1P24864 410 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 COL8A1P27658 744 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 TSPAN7P41732 249 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 OR1G1P47890 313 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 CLK1P49759 484 aaKnown RBP5.47□□□□□ -1.53
CLIP1-217ENST00000543205 BCAR1P56945 870 aa5.47□□□□□ -1.53
CLIP1-217ENST00000543205 ERVK-21P61565 698 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms