RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 PHTF2Q8N3S3 785 aa12.57□□□□□ -0.4
PTPN6-219ENST00000542848 PLEKHO2Q8TD55 490 aa12.57□□□□□ -0.4
PTPN6-219ENST00000542848 WHAMMQ8TF30 809 aa12.57□□□□□ -0.4
PTPN6-219ENST00000542848 ZFRQ96KR1 1074 aaKnown RBP12.57□□□□□ -0.4
PTPN6-219ENST00000542848 MED10Q9BTT4 135 aa12.57□□□□□ -0.4
PTPN6-219ENST00000542848 DMAP1Q9NPF5 467 aaPredicted RBP12.57□□□□□ -0.4
PTPN6-219ENST00000542848 DMAC2Q9NW81 257 aa12.57□□□□□ -0.4
PTPN6-219ENST00000542848 SH3BP1Q9Y3L3 701 aa12.57□□□□□ -0.4
PTPN6-219ENST00000542848 CACNA1EQ15878 2313 aa12.57□□□□□ -0.4
PTPN6-219ENST00000542848 LRRIQ3A6PVS8 624 aaPredicted RBP12.56□□□□□ -0.4
PTPN6-219ENST00000542848 SCAMP3O14828 347 aaKnown RBP12.56□□□□□ -0.4
PTPN6-219ENST00000542848 VNN1O95497 513 aa12.56□□□□□ -0.4
PTPN6-219ENST00000542848 RPN1P04843 607 aaKnown RBP12.56□□□□□ -0.4
PTPN6-219ENST00000542848 ZSCAN22P10073 491 aaPredicted RBP12.56□□□□□ -0.4
PTPN6-219ENST00000542848 P4HA1P13674 534 aa12.56□□□□□ -0.4
PTPN6-219ENST00000542848 DHPSP49366 369 aaPredicted RBP12.56□□□□□ -0.4
PTPN6-219ENST00000542848 SLC5A3P53794 718 aa12.56□□□□□ -0.4
PTPN6-219ENST00000542848 PSAPL1Q6NUJ1 521 aa12.56□□□□□ -0.4
PTPN6-219ENST00000542848 LPCAT2Q7L5N7 544 aa12.56□□□□□ -0.4
PTPN6-219ENST00000542848 ACOT1Q86TX2 421 aa12.56□□□□□ -0.4
PTPN6-219ENST00000542848 TTC30AQ86WT1 665 aa12.56□□□□□ -0.4
PTPN6-219ENST00000542848 ETFBKMTQ8IXQ9 262 aa12.56□□□□□ -0.4
PTPN6-219ENST00000542848 CEP57L1Q8IYX8 460 aa12.56□□□□□ -0.4
PTPN6-219ENST00000542848 FUKQ8N0W3 1084 aa12.56□□□□□ -0.4
PTPN6-219ENST00000542848 CRYBG2Q8N1P7 616 aa12.56□□□□□ -0.4
PTPN6-219ENST00000542848 TAF4BQ92750 862 aa12.56□□□□□ -0.4
PTPN6-219ENST00000542848 SPACA7Q96KW9 195 aa12.56□□□□□ -0.4
PTPN6-219ENST00000542848 SDCBP2Q9H190 292 aa12.56□□□□□ -0.4
PTPN6-219ENST00000542848 FBXO44Q9H4M3 255 aa12.56□□□□□ -0.4
PTPN6-219ENST00000542848 CCSER2Q9H7U1 834 aa12.56□□□□□ -0.4
PTPN6-219ENST00000542848 CSNK1G1Q9HCP0 422 aa12.56□□□□□ -0.4
PTPN6-219ENST00000542848 TMEM9BQ9NQ34 198 aa12.56□□□□□ -0.4
PTPN6-219ENST00000542848 SPHK2Q9NRA0 654 aa12.56□□□□□ -0.4
PTPN6-219ENST00000542848 EVLQ9UI08 416 aaPredicted RBP12.56□□□□□ -0.4
PTPN6-219ENST00000542848 CFAP45Q9UL16 551 aa12.56□□□□□ -0.4
PTPN6-219ENST00000542848 CIZ1Q9ULV3 898 aaPredicted RBP12.56□□□□□ -0.4
PTPN6-219ENST00000542848 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.55□□□□□ -0.4
PTPN6-219ENST00000542848 TBC1D3BA6NDS4 549 aa12.55□□□□□ -0.4
PTPN6-219ENST00000542848 PDXKO00764 312 aa12.55□□□□□ -0.4
PTPN6-219ENST00000542848 CDX4O14627 284 aaPredicted RBP12.55□□□□□ -0.4
PTPN6-219ENST00000542848 IKBKBO14920 756 aa12.55□□□□□ -0.4
PTPN6-219ENST00000542848 HOXC11O43248 304 aaPredicted RBP12.55□□□□□ -0.4
PTPN6-219ENST00000542848 MAP3K13O43283 966 aa12.55□□□□□ -0.4
PTPN6-219ENST00000542848 KLRC4O43908 158 aa12.55□□□□□ -0.4
PTPN6-219ENST00000542848 ADAM23O75077 832 aa12.55□□□□□ -0.4
PTPN6-219ENST00000542848 TULP3O75386 442 aa12.55□□□□□ -0.4
PTPN6-219ENST00000542848 AP1G2O75843 785 aa12.55□□□□□ -0.4
PTPN6-219ENST00000542848 F13A1P00488 732 aa12.55□□□□□ -0.4
PTPN6-219ENST00000542848 SLFN14P0C7P3 912 aa12.55□□□□□ -0.4
PTPN6-219ENST00000542848 DPP6P42658 865 aa12.55□□□□□ -0.4
PTPN6-219ENST00000542848 NOVA1P51513 510 aaKnown RBP12.55□□□□□ -0.4
PTPN6-219ENST00000542848 IRX4P78413 519 aa12.55□□□□□ -0.4
PTPN6-219ENST00000542848 KDSRQ06136 332 aa12.55□□□□□ -0.4
PTPN6-219ENST00000542848 STK4Q13043 487 aa12.55□□□□□ -0.4
PTPN6-219ENST00000542848 ZACNQ401N2 412 aa12.55□□□□□ -0.4
PTPN6-219ENST00000542848 FOXD4L5Q5VV16 416 aaPredicted RBP12.55□□□□□ -0.4
PTPN6-219ENST00000542848 TRMT11Q7Z4G4 463 aaKnown RBP12.55□□□□□ -0.4
PTPN6-219ENST00000542848 UNC93AQ86WB7 457 aa12.55□□□□□ -0.4
PTPN6-219ENST00000542848 BBS7Q8IWZ6 715 aa12.55□□□□□ -0.4
PTPN6-219ENST00000542848 ZMIZ2Q8NF64 920 aa12.55□□□□□ -0.4
PTPN6-219ENST00000542848 TMC2Q8TDI7 906 aa12.55□□□□□ -0.4
PTPN6-219ENST00000542848 RLN3Q8WXF3 142 aa12.55□□□□□ -0.4
PTPN6-219ENST00000542848 FOXD4L4Q8WXT5 416 aaPredicted RBP12.55□□□□□ -0.4
PTPN6-219ENST00000542848 PIGKQ92643 395 aa12.55□□□□□ -0.4
PTPN6-219ENST00000542848 SMOQ99835 787 aa12.55□□□□□ -0.4
PTPN6-219ENST00000542848 TLR8Q9NR97 1041 aaKnown RBP12.55□□□□□ -0.4
PTPN6-219ENST00000542848 GMIPQ9P107 970 aa12.55□□□□□ -0.4
PTPN6-219ENST00000542848 BCCIPQ9P287 314 aaKnown RBP eCLIP12.55□□□□□ -0.4
PTPN6-219ENST00000542848 DEC1Q9P2X7 70 aa12.55□□□□□ -0.4
PTPN6-219ENST00000542848 SERTAD1Q9UHV2 236 aa12.55□□□□□ -0.4
PTPN6-219ENST00000542848 RCOR1Q9UKL0 485 aa12.55□□□□□ -0.4
PTPN6-219ENST00000542848 STARD13Q9Y3M8 1113 aa12.55□□□□□ -0.4
PTPN6-219ENST00000542848 PATE3B3GLJ2 98 aa12.54□□□□□ -0.4
PTPN6-219ENST00000542848 CLSTN1O94985 981 aa12.54□□□□□ -0.4
PTPN6-219ENST00000542848 CEACAM1P13688 526 aa12.54□□□□□ -0.4
PTPN6-219ENST00000542848 TRIM21P19474 475 aaKnown RBP12.54□□□□□ -0.4
PTPN6-219ENST00000542848 CSRP1P21291 193 aaKnown RBP12.54□□□□□ -0.4
PTPN6-219ENST00000542848 NDST1P52848 882 aa12.54□□□□□ -0.4
PTPN6-219ENST00000542848 DLG4P78352 724 aa12.54□□□□□ -0.4
PTPN6-219ENST00000542848 LMAN2Q12907 356 aa12.54□□□□□ -0.4
PTPN6-219ENST00000542848 ANO4Q32M45 955 aa12.54□□□□□ -0.4
PTPN6-219ENST00000542848 MAP7D1Q3KQU3 841 aa12.54□□□□□ -0.4
PTPN6-219ENST00000542848 FOXD4L6Q3SYB3 417 aaPredicted RBP12.54□□□□□ -0.4
PTPN6-219ENST00000542848 FOXD4L3Q6VB84 417 aaPredicted RBP12.54□□□□□ -0.4
PTPN6-219ENST00000542848 SCARA5Q6ZMJ2 495 aa12.54□□□□□ -0.4
PTPN6-219ENST00000542848 HTR3DQ70Z44 454 aa12.54□□□□□ -0.4
PTPN6-219ENST00000542848 TMEM25Q86YD3 366 aa12.54□□□□□ -0.4
PTPN6-219ENST00000542848 SYT12Q8IV01 421 aa12.54□□□□□ -0.4
PTPN6-219ENST00000542848 GRAMD1CQ8IYS0 662 aa12.54□□□□□ -0.4
PTPN6-219ENST00000542848 ZNF513Q8N8E2 541 aaPredicted RBP12.54□□□□□ -0.4
PTPN6-219ENST00000542848 NAT16Q8N8M0 369 aa12.54□□□□□ -0.4
PTPN6-219ENST00000542848 KIAA0895Q8NCT3 520 aa12.54□□□□□ -0.4
PTPN6-219ENST00000542848 HMGB4Q8WW32 186 aa12.54□□□□□ -0.4
PTPN6-219ENST00000542848 PAGE5Q96GU1 130 aa12.54□□□□□ -0.4
PTPN6-219ENST00000542848 NUSAP1Q9BXS6 441 aaKnown RBP12.54□□□□□ -0.4
PTPN6-219ENST00000542848 NACA2Q9H009 215 aa12.54□□□□□ -0.4
PTPN6-219ENST00000542848 KCTD10Q9H3F6 313 aa12.54□□□□□ -0.4
PTPN6-219ENST00000542848 KRT82Q9NSB4 513 aa12.54□□□□□ -0.4
PTPN6-219ENST00000542848 EXOC1Q9NV70 894 aa12.54□□□□□ -0.4
PTPN6-219ENST00000542848 MBD1Q9UIS9 605 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms