RNA–Protein interactions for RNA: ENST00000542791.1

MRPS35-205, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-205ENST00000542791 ZDHHC16Q969W1 377 aa8.28□□□□□ -1.08
MRPS35-205ENST00000542791 ACDQ96AP0 544 aa8.28□□□□□ -1.08
MRPS35-205ENST00000542791 SMARCD1Q96GM5 515 aa8.28□□□□□ -1.08
MRPS35-205ENST00000542791 LOXL4Q96JB6 756 aa8.28□□□□□ -1.08
MRPS35-205ENST00000542791 SMOQ99835 787 aa8.28□□□□□ -1.08
MRPS35-205ENST00000542791 SLC4A5Q9BY07 1137 aa8.28□□□□□ -1.08
MRPS35-205ENST00000542791 CSNK1G1Q9HCP0 422 aa8.28□□□□□ -1.08
MRPS35-205ENST00000542791 KRT82Q9NSB4 513 aa8.28□□□□□ -1.08
MRPS35-205ENST00000542791 SEMA4GQ9NTN9 838 aa8.28□□□□□ -1.08
MRPS35-205ENST00000542791 COMMD8Q9NX08 183 aa8.28□□□□□ -1.08
MRPS35-205ENST00000542791 SMPD4Q9NXE4 827 aa8.28□□□□□ -1.08
MRPS35-205ENST00000542791 CFAP97Q9P2B7 532 aa8.28□□□□□ -1.08
MRPS35-205ENST00000542791 EBF1Q9UH73 591 aa8.28□□□□□ -1.08
MRPS35-205ENST00000542791 SLC8A2Q9UPR5 921 aa8.28□□□□□ -1.08
MRPS35-205ENST00000542791 GREB1Q4ZG55 1949 aa8.28□□□□□ -1.08
MRPS35-205ENST00000542791 CACNA1EQ15878 2313 aa8.28□□□□□ -1.08
MRPS35-205ENST00000542791 ANAPC1Q9H1A4 1944 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 ATG2BQ96BY7 2078 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 A0A0A0MRY4 1105 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 E2F8A0AVK6 867 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 K7EQS6 105 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 SLC9A3R1O14745 358 aaPredicted RBP8.27□□□□□ -1.09
MRPS35-205ENST00000542791 FOXD2O60548 495 aaPredicted RBP8.27□□□□□ -1.09
MRPS35-205ENST00000542791 RPP40O75818 363 aaKnown RBP8.27□□□□□ -1.09
MRPS35-205ENST00000542791 BEST1O76090 585 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 ZNF202O95125 648 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 APBB3O95704 486 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 ABL1P00519 1130 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 TRIM49P0CI25 452 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 TRIM49CP0CI26 452 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 MBL2P11226 248 aaPredicted RBP8.27□□□□□ -1.09
MRPS35-205ENST00000542791 CCDC130P13994 396 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 EIF2DP41214 584 aaKnown RBP8.27□□□□□ -1.09
MRPS35-205ENST00000542791 GCLMP48507 274 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 PPP3CAQ08209 521 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 MESP2Q0VG99 397 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 IFRD2Q12894 506 aaPredicted RBP8.27□□□□□ -1.09
MRPS35-205ENST00000542791 ORC1Q13415 861 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 DMC1Q14565 340 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 DHCR24Q15392 516 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 CSRP2Q16527 193 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 HECTD3Q5T447 861 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 SPOPLQ6IQ16 392 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 RHBDF2Q6PJF5 856 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 CEP68Q76N32 757 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 CACNA2D4Q7Z3S7 1137 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 C12orf29Q8N999 325 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 TAS1R2Q8TE23 839 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 USP33Q8TEY7 942 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 WHAMMQ8TF30 809 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 ZC3H10Q96K80 434 aaKnown RBP8.27□□□□□ -1.09
MRPS35-205ENST00000542791 HHIPQ96QV1 700 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 TWNKQ96RR1 684 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 RTKNQ9BST9 563 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 MED10Q9BTT4 135 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 CCSER2Q9H7U1 834 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 CYP3A43Q9HB55 503 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 APOBEC3GQ9HC16 384 aaKnown RBP8.27□□□□□ -1.09
MRPS35-205ENST00000542791 GMIPQ9P107 970 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 CHORDC1Q9UHD1 332 aaPredicted RBP8.27□□□□□ -1.09
MRPS35-205ENST00000542791 CDV3Q9UKY7 258 aaKnown RBP8.27□□□□□ -1.09
MRPS35-205ENST00000542791 MAPK8IP1Q9UQF2 711 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.27□□□□□ -1.09
MRPS35-205ENST00000542791 DMXL2Q8TDJ6 3036 aa8.27□□□□□ -1.09
MRPS35-205ENST00000542791 ANKRD11Q6UB99 2663 aaPredicted RBP8.26□□□□□ -1.09
MRPS35-205ENST00000542791 AKAP13Q12802 2813 aa8.26□□□□□ -1.09
MRPS35-205ENST00000542791 ZNF638Q14966 1978 aaKnown RBP8.26□□□□□ -1.09
MRPS35-205ENST00000542791 ANTXRLA6NF34 631 aa8.26□□□□□ -1.09
MRPS35-205ENST00000542791 HHLA1C9JL84 531 aa8.26□□□□□ -1.09
MRPS35-205ENST00000542791 SCAMP3O14828 347 aaKnown RBP8.26□□□□□ -1.09
MRPS35-205ENST00000542791 SLC30A4O14863 429 aa8.26□□□□□ -1.09
MRPS35-205ENST00000542791 AXIN1O15169 862 aa8.26□□□□□ -1.09
MRPS35-205ENST00000542791 GREM1O60565 184 aa8.26□□□□□ -1.09
MRPS35-205ENST00000542791 CILPO75339 1184 aa8.26□□□□□ -1.09
MRPS35-205ENST00000542791 CLSTN1O94985 981 aa8.26□□□□□ -1.09
MRPS35-205ENST00000542791 EPN2O95208 641 aa8.26□□□□□ -1.09
MRPS35-205ENST00000542791 ADH1CP00326 375 aa8.26□□□□□ -1.09
MRPS35-205ENST00000542791 FAM200BP0CF97 657 aa8.26□□□□□ -1.09
MRPS35-205ENST00000542791 RPL13P26373 211 aaKnown RBP8.26□□□□□ -1.09
MRPS35-205ENST00000542791 GTF2H1P32780 548 aa8.26□□□□□ -1.09
MRPS35-205ENST00000542791 PSMC2P35998 433 aaKnown RBP8.26□□□□□ -1.09
MRPS35-205ENST00000542791 PIK3CAP42336 1068 aa8.26□□□□□ -1.09
MRPS35-205ENST00000542791 PGFP49763 221 aa8.26□□□□□ -1.09
MRPS35-205ENST00000542791 ADAM9Q13443 819 aa8.26□□□□□ -1.09
MRPS35-205ENST00000542791 EDRF1Q3B7T1 1238 aa8.26□□□□□ -1.09
MRPS35-205ENST00000542791 PLK5Q496M5 336 aa8.26□□□□□ -1.09
MRPS35-205ENST00000542791 PLA2G2CQ5R387 149 aa8.26□□□□□ -1.09
MRPS35-205ENST00000542791 PRR23CQ6ZRP0 262 aa8.26□□□□□ -1.09
MRPS35-205ENST00000542791 CLEC20AQ6ZU45 233 aa8.26□□□□□ -1.09
MRPS35-205ENST00000542791 KBTBD6Q86V97 674 aa8.26□□□□□ -1.09
MRPS35-205ENST00000542791 RASSF3Q86WH2 238 aa8.26□□□□□ -1.09
MRPS35-205ENST00000542791 C12orf40Q86WS4 652 aa8.26□□□□□ -1.09
MRPS35-205ENST00000542791 SFTPA1Q8IWL2 248 aa8.26□□□□□ -1.09
MRPS35-205ENST00000542791 FAM186BQ8IYM0 893 aa8.26□□□□□ -1.09
MRPS35-205ENST00000542791 PHTF2Q8N3S3 785 aa8.26□□□□□ -1.09
MRPS35-205ENST00000542791 NETO1Q8TDF5 533 aa8.26□□□□□ -1.09
MRPS35-205ENST00000542791 CCDC47Q96A33 483 aaKnown RBP8.26□□□□□ -1.09
MRPS35-205ENST00000542791 OTUB2Q96DC9 234 aa8.26□□□□□ -1.09
MRPS35-205ENST00000542791 HNRNPABQ99729 332 aaKnown RBP8.26□□□□□ -1.09
MRPS35-205ENST00000542791 NIF3L1Q9GZT8 377 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms