RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 RRM1P23921 792 aa24.24■■□□□ 1.47
HOMER3-205ENST00000542541 LTBRP36941 435 aa24.24■■□□□ 1.47
HOMER3-205ENST00000542541 ATAT1Q5SQI0 421 aa24.24■■□□□ 1.47
HOMER3-205ENST00000542541 GRASPQ7Z6J2 395 aaPredicted RBP24.24■■□□□ 1.47
HOMER3-205ENST00000542541 DNAAF5Q86Y56 855 aa24.24■■□□□ 1.47
HOMER3-205ENST00000542541 CLEC4CQ8WTT0 213 aa24.24■■□□□ 1.47
HOMER3-205ENST00000542541 ZNF830Q96NB3 372 aaPredicted RBP24.24■■□□□ 1.47
HOMER3-205ENST00000542541 THAP2Q9H0W7 228 aa24.24■■□□□ 1.47
HOMER3-205ENST00000542541 ZNF334Q9HCZ1 680 aaPredicted RBP24.24■■□□□ 1.47
HOMER3-205ENST00000542541 AVENQ9NQS1 362 aaPredicted RBP24.24■■□□□ 1.47
HOMER3-205ENST00000542541 PARVAQ9NVD7 372 aa24.24■■□□□ 1.47
HOMER3-205ENST00000542541 ASNSD1Q9NWL6 643 aa24.24■■□□□ 1.47
HOMER3-205ENST00000542541 HCFC1R1Q9NWW0 138 aa24.24■■□□□ 1.47
HOMER3-205ENST00000542541 CNOT8Q9UFF9 292 aaKnown RBP24.24■■□□□ 1.47
HOMER3-205ENST00000542541 YJEFN3A6XGL0 299 aa24.24■■□□□ 1.47
HOMER3-205ENST00000542541 E7ENQ6 273 aa24.24■■□□□ 1.47
HOMER3-205ENST00000542541 GOLGA8SH3BPF8 625 aa24.24■■□□□ 1.47
HOMER3-205ENST00000542541 TMEM253P0C7T8 217 aa24.24■■□□□ 1.47
HOMER3-205ENST00000542541 GABRR2P28476 465 aa24.24■■□□□ 1.47
HOMER3-205ENST00000542541 YWHAZP63104 245 aaKnown RBP24.24■■□□□ 1.47
HOMER3-205ENST00000542541 DLX2Q07687 328 aaPredicted RBP24.24■■□□□ 1.47
HOMER3-205ENST00000542541 FAM102AQ5T9C2 384 aaPredicted RBP24.24■■□□□ 1.47
HOMER3-205ENST00000542541 DNAJC24Q6P3W2 148 aa24.24■■□□□ 1.47
HOMER3-205ENST00000542541 SLC26A9Q7LBE3 791 aa24.24■■□□□ 1.47
HOMER3-205ENST00000542541 TMC8Q8IU68 726 aa24.24■■□□□ 1.47
HOMER3-205ENST00000542541 HS6ST3Q8IZP7 471 aa24.24■■□□□ 1.47
HOMER3-205ENST00000542541 PPM1EQ8WY54 764 aa24.24■■□□□ 1.47
HOMER3-205ENST00000542541 FAM149B1Q96BN6 582 aa24.24■■□□□ 1.47
HOMER3-205ENST00000542541 APOL5Q9BWW9 433 aa24.24■■□□□ 1.47
HOMER3-205ENST00000542541 KCNF1Q9H3M0 494 aa24.24■■□□□ 1.47
HOMER3-205ENST00000542541 MRPL47Q9HD33 250 aaKnown RBP24.24■■□□□ 1.47
HOMER3-205ENST00000542541 GMIPQ9P107 970 aa24.24■■□□□ 1.47
HOMER3-205ENST00000542541 SCINQ9Y6U3 715 aa24.24■■□□□ 1.47
HOMER3-205ENST00000542541 HSF2BPO75031 334 aa24.23■■□□□ 1.47
HOMER3-205ENST00000542541 F11P03951 625 aa24.23■■□□□ 1.47
HOMER3-205ENST00000542541 YWHAGP61981 247 aaKnown RBP eCLIP24.23■■□□□ 1.47
HOMER3-205ENST00000542541 PLEKHA7Q6IQ23 1121 aa24.23■■□□□ 1.47
HOMER3-205ENST00000542541 NDRG1Q92597 394 aaKnown RBP24.23■■□□□ 1.47
HOMER3-205ENST00000542541 MSLNLQ96KJ4 702 aa24.23■■□□□ 1.47
HOMER3-205ENST00000542541 RIPOR3Q96MK2 946 aa24.23■■□□□ 1.47
HOMER3-205ENST00000542541 SELENOOQ9BVL4 669 aa24.23■■□□□ 1.47
HOMER3-205ENST00000542541 S1PR5Q9H228 398 aa24.23■■□□□ 1.47
HOMER3-205ENST00000542541 IL21Q9HBE4 155 aa24.23■■□□□ 1.47
HOMER3-205ENST00000542541 ABCC13Q9NSE7 274 aa24.23■■□□□ 1.47
HOMER3-205ENST00000542541 CLIC5Q9NZA1 410 aa24.23■■□□□ 1.47
HOMER3-205ENST00000542541 LTFP02788 710 aa24.22■■□□□ 1.47
HOMER3-205ENST00000542541 ZDHHC11BP0C7U3 371 aa24.22■■□□□ 1.47
HOMER3-205ENST00000542541 RALAP11233 206 aa24.22■■□□□ 1.47
HOMER3-205ENST00000542541 KRT3P12035 628 aa24.22■■□□□ 1.47
HOMER3-205ENST00000542541 SNX30Q5VWJ9 437 aa24.22■■□□□ 1.47
HOMER3-205ENST00000542541 BSPRYQ5W0U4 402 aa24.22■■□□□ 1.47
HOMER3-205ENST00000542541 BTBD8Q5XKL5 378 aa24.22■■□□□ 1.47
HOMER3-205ENST00000542541 PHLDB2Q86SQ0 1253 aa24.22■■□□□ 1.47
HOMER3-205ENST00000542541 KIAA1328Q86T90 577 aa24.22■■□□□ 1.47
HOMER3-205ENST00000542541 ACRBPQ8NEB7 543 aa24.22■■□□□ 1.47
HOMER3-205ENST00000542541 MRPS31Q92665 395 aaKnown RBP24.22■■□□□ 1.47
HOMER3-205ENST00000542541 DESI2Q9BSY9 194 aa24.22■■□□□ 1.47
HOMER3-205ENST00000542541 PACSIN1Q9BY11 444 aa24.22■■□□□ 1.47
HOMER3-205ENST00000542541 ATXN3LQ9H3M9 355 aa24.22■■□□□ 1.47
HOMER3-205ENST00000542541 POPDC2Q9HBU9 364 aa24.22■■□□□ 1.47
HOMER3-205ENST00000542541 MYO1AQ9UBC5 1043 aa24.22■■□□□ 1.47
HOMER3-205ENST00000542541 ADGRG1Q9Y653 693 aa24.22■■□□□ 1.47
HOMER3-205ENST00000542541 PATJQ8NI35 1801 aa24.22■■□□□ 1.47
HOMER3-205ENST00000542541 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.21■■□□□ 1.47
HOMER3-205ENST00000542541 A0A1W2PQH9 124 aa24.21■■□□□ 1.47
HOMER3-205ENST00000542541 ZNF840PA6NDX5 716 aa24.21■■□□□ 1.47
HOMER3-205ENST00000542541 SIGLEC16A6NMB1 481 aa24.21■■□□□ 1.47
HOMER3-205ENST00000542541 ABL1P00519 1130 aa24.21■■□□□ 1.47
HOMER3-205ENST00000542541 CYP1A2P05177 515 aa24.21■■□□□ 1.47
HOMER3-205ENST00000542541 CCDC175P0C221 793 aa24.21■■□□□ 1.47
HOMER3-205ENST00000542541 MAMLD1Q13495 774 aa24.21■■□□□ 1.47
HOMER3-205ENST00000542541 GAREM2Q75VX8 874 aa24.21■■□□□ 1.47
HOMER3-205ENST00000542541 BEND5Q7L4P6 421 aa24.21■■□□□ 1.47
HOMER3-205ENST00000542541 ARCQ7LC44 396 aa24.21■■□□□ 1.47
HOMER3-205ENST00000542541 BHLHA9Q7RTU4 235 aa24.21■■□□□ 1.47
HOMER3-205ENST00000542541 SCD5Q86SK9 330 aa24.21■■□□□ 1.47
HOMER3-205ENST00000542541 TADA2BQ86TJ2 420 aa24.21■■□□□ 1.47
HOMER3-205ENST00000542541 CDK5RAP1Q96SZ6 601 aaKnown RBP24.21■■□□□ 1.47
HOMER3-205ENST00000542541 UBE2ZQ9H832 354 aaPredicted RBP24.21■■□□□ 1.47
HOMER3-205ENST00000542541 CD207Q9UJ71 328 aa24.21■■□□□ 1.47
HOMER3-205ENST00000542541 CAPN9O14815 690 aa24.21■■□□□ 1.47
HOMER3-205ENST00000542541 MTHFRP42898 656 aa24.21■■□□□ 1.47
HOMER3-205ENST00000542541 VAV2P52735 878 aa24.21■■□□□ 1.47
HOMER3-205ENST00000542541 DCUN1D2Q6PH85 259 aa24.21■■□□□ 1.47
HOMER3-205ENST00000542541 ZNF276Q8N554 614 aa24.21■■□□□ 1.47
HOMER3-205ENST00000542541 HLA-CQ95604 372 aa24.21■■□□□ 1.47
HOMER3-205ENST00000542541 PIWIL1Q96J94 861 aaKnown RBP24.21■■□□□ 1.47
HOMER3-205ENST00000542541 ZMYM5Q9UJ78 669 aa24.21■■□□□ 1.47
HOMER3-205ENST00000542541 REXO2Q9Y3B8 237 aaKnown RBP24.21■■□□□ 1.47
HOMER3-205ENST00000542541 MRPS23Q9Y3D9 190 aaKnown RBP24.21■■□□□ 1.47
HOMER3-205ENST00000542541 TCRBV5S1A1TA0A578 114 aa24.2■■□□□ 1.46
HOMER3-205ENST00000542541 RNASE9P60153 205 aaKnown RBP24.2■■□□□ 1.46
HOMER3-205ENST00000542541 ARHGAP15Q53QZ3 475 aa24.2■■□□□ 1.46
HOMER3-205ENST00000542541 TMEM150AQ86TG1 271 aa24.2■■□□□ 1.46
HOMER3-205ENST00000542541 SMRP1Q8NCR6 262 aa24.2■■□□□ 1.46
HOMER3-205ENST00000542541 RNF139Q8WU17 664 aa24.2■■□□□ 1.46
HOMER3-205ENST00000542541 NMUR1Q9HB89 426 aa24.2■■□□□ 1.46
HOMER3-205ENST00000542541 WDR6Q9NNW5 1121 aaKnown RBP24.2■■□□□ 1.46
HOMER3-205ENST00000542541 METTL5Q9NRN9 209 aaKnown RBP24.2■■□□□ 1.46
HOMER3-205ENST00000542541 TMEM59LQ9UK28 342 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms