RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 MYO1AQ9UBC5 1043 aa3.82□□□□□ -1.8
USP28-210ENST00000542033 DRG1Q9Y295 367 aaKnown RBP3.82□□□□□ -1.8
USP28-210ENST00000542033 A0A0U1RQG5 324 aaPredicted RBP3.81□□□□□ -1.8
USP28-210ENST00000542033 A0A1W2PPC4 97 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 MGST3O14880 152 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 NPHP1O15259 732 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 NCK2O43639 380 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 PROP1O75360 226 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 FGF18O76093 207 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 VNN1O95497 513 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 FGAP02671 866 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 ERBB2P04626 1255 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 NPSP0C0P6 89 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 ELFN1P0C7U0 828 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 ENGP17813 658 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 GPD1P21695 349 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 TRAPPC10P48553 1259 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 GATMP50440 423 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 EEFSECP57772 596 aaKnown RBP3.81□□□□□ -1.8
USP28-210ENST00000542033 SUMO2P61956 95 aaKnown RBP3.81□□□□□ -1.8
USP28-210ENST00000542033 BTKQ06187 659 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 PMS2P11Q13670 270 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 TBC1D25Q3MII6 688 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 AARS2Q5JTZ9 985 aaKnown RBP3.81□□□□□ -1.8
USP28-210ENST00000542033 PCID2Q5JVF3 399 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 IZUMO3Q5VZ72 239 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 HIBCHQ6NVY1 386 aaPredicted RBP3.81□□□□□ -1.8
USP28-210ENST00000542033 CATSPERGQ6ZRH7 1159 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 SLC29A4Q7RTT9 530 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 KRT28Q7Z3Y7 464 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 ZNF804AQ7Z570 1209 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 ARHGEF25Q86VW2 580 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 ZNF575Q86XF7 245 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 VGLL2Q8N8G2 317 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 FANCBQ8NB91 859 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 VPS37AQ8NEZ2 397 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 ABHD11Q8NFV4 315 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 MYRIPQ8NFW9 859 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 BRI3BPQ8WY22 251 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 ZNF566Q969W8 418 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 RSPRY1Q96DX4 576 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 ZBTB45Q96K62 511 aaPredicted RBP3.81□□□□□ -1.8
USP28-210ENST00000542033 BBC3Q96PG8 261 aaPredicted RBP3.81□□□□□ -1.8
USP28-210ENST00000542033 HIST1H2AAQ96QV6 131 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 TIMP4Q99727 224 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 VN1R3Q9BXE9 311 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 EIF2AQ9BY44 585 aaKnown RBP3.81□□□□□ -1.8
USP28-210ENST00000542033 ALG13Q9NP73 1137 aaKnown RBP3.81□□□□□ -1.8
USP28-210ENST00000542033 ASB6Q9NWX5 421 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 DNAJB11Q9UBS4 358 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 CAPN11Q9UMQ6 739 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 HPSEQ9Y251 543 aa3.81□□□□□ -1.8
USP28-210ENST00000542033 H0YIZ8 118 aa3.8□□□□□ -1.8
USP28-210ENST00000542033 COQ9O75208 318 aa3.8□□□□□ -1.8
USP28-210ENST00000542033 IGLV2-14P01704 120 aa3.8□□□□□ -1.8
USP28-210ENST00000542033 HARSP12081 509 aaKnown RBP3.8□□□□□ -1.8
USP28-210ENST00000542033 JUPP14923 745 aa3.8□□□□□ -1.8
USP28-210ENST00000542033 CD19P15391 556 aa3.8□□□□□ -1.8
USP28-210ENST00000542033 WT1P19544 449 aaPredicted RBP3.8□□□□□ -1.8
USP28-210ENST00000542033 DRD4P21917 467 aa3.8□□□□□ -1.8
USP28-210ENST00000542033 FBLP22087 321 aaKnown RBP3.8□□□□□ -1.8
USP28-210ENST00000542033 PCSK6P29122 969 aa3.8□□□□□ -1.8
USP28-210ENST00000542033 COPAP53621 1224 aa3.8□□□□□ -1.8
USP28-210ENST00000542033 GRM1Q13255 1194 aa3.8□□□□□ -1.8
USP28-210ENST00000542033 XRRA1Q6P2D8 792 aa3.8□□□□□ -1.8
USP28-210ENST00000542033 FBXO38Q6PIJ6 1188 aa3.8□□□□□ -1.8
USP28-210ENST00000542033 USP17L6PQ6QN14 398 aa3.8□□□□□ -1.8
USP28-210ENST00000542033 Q6ZWC4 215 aa3.8□□□□□ -1.8
USP28-210ENST00000542033 MYLK4Q86YV6 388 aaPredicted RBP3.8□□□□□ -1.8
USP28-210ENST00000542033 SMAP1Q8IYB5 467 aaPredicted RBP3.8□□□□□ -1.8
USP28-210ENST00000542033 SIRT6Q8N6T7 355 aa3.8□□□□□ -1.8
USP28-210ENST00000542033 ANKRD42Q8N9B4 389 aa3.8□□□□□ -1.8
USP28-210ENST00000542033 DEPTORQ8TB45 409 aa3.8□□□□□ -1.8
USP28-210ENST00000542033 TBC1D5Q92609 795 aa3.8□□□□□ -1.8
USP28-210ENST00000542033 ZNF764Q96H86 408 aaPredicted RBP3.8□□□□□ -1.8
USP28-210ENST00000542033 SNX27Q96L92 541 aa3.8□□□□□ -1.8
USP28-210ENST00000542033 SLC25A32Q9H2D1 315 aa3.8□□□□□ -1.8
USP28-210ENST00000542033 KLK15Q9H2R5 256 aa3.8□□□□□ -1.8
USP28-210ENST00000542033 R3HDMLQ9H3Y0 253 aa3.8□□□□□ -1.8
USP28-210ENST00000542033 ZBTB26Q9HCK0 441 aa3.8□□□□□ -1.8
USP28-210ENST00000542033 ARFGAP3Q9NP61 516 aa3.8□□□□□ -1.8
USP28-210ENST00000542033 DUSP22Q9NRW4 184 aa3.8□□□□□ -1.8
USP28-210ENST00000542033 GJB4Q9NTQ9 266 aa3.8□□□□□ -1.8
USP28-210ENST00000542033 DLL3Q9NYJ7 618 aa3.8□□□□□ -1.8
USP28-210ENST00000542033 MAN2B2Q9Y2E5 1009 aa3.8□□□□□ -1.8
USP28-210ENST00000542033 WNT6Q9Y6F9 365 aa3.8□□□□□ -1.8
USP28-210ENST00000542033 AP4M1O00189 453 aa3.79□□□□□ -1.8
USP28-210ENST00000542033 EXOC5O00471 708 aa3.79□□□□□ -1.8
USP28-210ENST00000542033 CES2O00748 559 aa3.79□□□□□ -1.8
USP28-210ENST00000542033 CCNT2O60583 730 aaKnown RBP3.79□□□□□ -1.8
USP28-210ENST00000542033 WDHD1O75717 1129 aaPredicted RBP3.79□□□□□ -1.8
USP28-210ENST00000542033 HNRNPCP07910 306 aaKnown RBP eCLIP3.79□□□□□ -1.8
USP28-210ENST00000542033 YY1P25490 414 aa3.79□□□□□ -1.8
USP28-210ENST00000542033 NTSR1P30989 418 aa3.79□□□□□ -1.8
USP28-210ENST00000542033 ATICP31939 592 aa3.79□□□□□ -1.8
USP28-210ENST00000542033 GKP32189 559 aa3.79□□□□□ -1.8
USP28-210ENST00000542033 TIRAPP58753 221 aa3.79□□□□□ -1.8
USP28-210ENST00000542033 TIAL1Q01085 375 aaKnown RBP eCLIP3.79□□□□□ -1.8
USP28-210ENST00000542033 E2F1Q01094 437 aa3.79□□□□□ -1.8
USP28-210ENST00000542033 SETQ01105 290 aaPredicted RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms