RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 PDE4DIPQ5VU43 2346 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 FRMPD4Q14CM0 1322 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 MKI67P46013 3256 aaKnown RBP6.04□□□□□ -1.44
CPSF7-220ENST00000541963 LCTP09848 1927 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 KIAA1217Q5T5P2 1943 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 ALPK3Q96L96 1907 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 hCG_1642624A0A1W2PR95 340 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 TRIM43BA6NCK2 446 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 DTNBO60941 627 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 OFD1O75665 1012 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 FSBPO95073 299 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 ARIH2O95376 493 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 GGPS1O95749 300 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 KNG1P01042 644 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 CD4P01730 458 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 MMP3P08254 477 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 SCG2P13521 617 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 IFNAR1P17181 557 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 XBP1P17861 261 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 GLDCP23378 1020 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 MEOX1P50221 254 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 KCNQ1P51787 676 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 PSMC6P62333 389 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 CCT2P78371 535 aaKnown RBP6.04□□□□□ -1.44
CPSF7-220ENST00000541963 FPGSQ05932 587 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 ARHGAP1Q07960 439 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 PPIGQ13427 754 aaKnown RBP eCLIP6.04□□□□□ -1.448e-8■■■□□ 16
CPSF7-220ENST00000541963 BFSP2Q13515 415 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 LRIT3Q3SXY7 679 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 ZNF385BQ569K4 471 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 TMEM63BQ5T3F8 832 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 MFSD5Q6N075 450 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 TTC8Q8TAM2 541 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 GFM2Q969S9 779 aaKnown RBP6.04□□□□□ -1.44
CPSF7-220ENST00000541963 TRIM43Q96BQ3 446 aaPredicted RBP6.04□□□□□ -1.44
CPSF7-220ENST00000541963 LRGUKQ96M69 825 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 WDR92Q96MX6 357 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 PWWP2AQ96N64 755 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 AIFM3Q96NN9 605 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 SLC26A6Q9BXS9 759 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 C22orf23Q9BZE7 217 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 MTIF3Q9H2K0 278 aaKnown RBP6.04□□□□□ -1.44
CPSF7-220ENST00000541963 PRO3102Q9H379 93 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 JADE2Q9NQC1 790 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 SH3GLB2Q9NR46 395 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 NTMQ9P121 344 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 DNM3Q9UQ16 869 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 NID2Q14112 1375 aa6.04□□□□□ -1.44
CPSF7-220ENST00000541963 ESYT2A0FGR8 921 aa6.03□□□□□ -1.44
CPSF7-220ENST00000541963 DEXIO95424 95 aa6.03□□□□□ -1.44
CPSF7-220ENST00000541963 CYP1A1P04798 512 aaPredicted RBP6.03□□□□□ -1.44
CPSF7-220ENST00000541963 RPLP2P05387 115 aaKnown RBP6.03□□□□□ -1.44
CPSF7-220ENST00000541963 KRT18P05783 430 aaKnown RBP6.03□□□□□ -1.44
CPSF7-220ENST00000541963 C5AR1P21730 350 aa6.03□□□□□ -1.44
CPSF7-220ENST00000541963 RPL13P26373 211 aaKnown RBP6.03□□□□□ -1.44
CPSF7-220ENST00000541963 NLRP5P59047 1200 aa6.03□□□□□ -1.44
CPSF7-220ENST00000541963 MGAT5Q09328 741 aa6.03□□□□□ -1.44
CPSF7-220ENST00000541963 MALLQ13021 153 aa6.03□□□□□ -1.44
CPSF7-220ENST00000541963 TOB2Q14106 344 aaPredicted RBP6.03□□□□□ -1.44
CPSF7-220ENST00000541963 UBE2SQ16763 222 aa6.03□□□□□ -1.44
CPSF7-220ENST00000541963 GALNT17Q6IS24 598 aa6.03□□□□□ -1.44
CPSF7-220ENST00000541963 METTL7BQ6UX53 244 aa6.03□□□□□ -1.44
CPSF7-220ENST00000541963 ATG14Q6ZNE5 492 aa6.03□□□□□ -1.44
CPSF7-220ENST00000541963 SESTD1Q86VW0 696 aa6.03□□□□□ -1.44
CPSF7-220ENST00000541963 IL31RAQ8NI17 732 aa6.03□□□□□ -1.44
CPSF7-220ENST00000541963 FNIP1Q8TF40 1166 aa6.03□□□□□ -1.44
CPSF7-220ENST00000541963 WASF1Q92558 559 aa6.03□□□□□ -1.44
CPSF7-220ENST00000541963 INPP4AQ96PE3 977 aaPredicted RBP6.03□□□□□ -1.44
CPSF7-220ENST00000541963 MXRA8Q9BRK3 442 aa6.03□□□□□ -1.44
CPSF7-220ENST00000541963 SDF4Q9BRK5 362 aa6.03□□□□□ -1.44
CPSF7-220ENST00000541963 OSBPL6Q9BZF3 934 aa6.03□□□□□ -1.44
CPSF7-220ENST00000541963 UPF3BQ9BZI7 483 aaKnown RBP6.03□□□□□ -1.44
CPSF7-220ENST00000541963 ZMYND12Q9H0C1 365 aa6.03□□□□□ -1.44
CPSF7-220ENST00000541963 HIPK3Q9H422 1215 aa6.03□□□□□ -1.44
CPSF7-220ENST00000541963 UPF2Q9HAU5 1272 aaKnown RBP6.03□□□□□ -1.44
CPSF7-220ENST00000541963 MAGEL2Q9UJ55 1249 aa6.03□□□□□ -1.44
CPSF7-220ENST00000541963 CDC42EP3Q9UKI2 254 aa6.03□□□□□ -1.44
CPSF7-220ENST00000541963 TBX21Q9UL17 535 aa6.03□□□□□ -1.44
CPSF7-220ENST00000541963 ZNF215Q9UL58 517 aaPredicted RBP6.03□□□□□ -1.44
CPSF7-220ENST00000541963 KCTD3Q9Y597 815 aa6.03□□□□□ -1.44
CPSF7-220ENST00000541963 UBIAD1Q9Y5Z9 338 aa6.03□□□□□ -1.44
CPSF7-220ENST00000541963 MYH7BA7E2Y1 1941 aa6.03□□□□□ -1.44
CPSF7-220ENST00000541963 LRRC37A2A6NM11 1700 aa6.02□□□□□ -1.45
CPSF7-220ENST00000541963 GRIN2DO15399 1336 aa6.02□□□□□ -1.45
CPSF7-220ENST00000541963 DDX3XO00571 662 aaKnown RBP eCLIP6.02□□□□□ -1.451e-6■■■■□ 20.9
CPSF7-220ENST00000541963 B4GALT4O60513 344 aa6.02□□□□□ -1.45
CPSF7-220ENST00000541963 FGBP02675 491 aa6.02□□□□□ -1.45
CPSF7-220ENST00000541963 ACTN1P12814 892 aa6.02□□□□□ -1.45
CPSF7-220ENST00000541963 UBA1P22314 1058 aaKnown RBP6.02□□□□□ -1.45
CPSF7-220ENST00000541963 RFC2P35250 354 aa6.02□□□□□ -1.45
CPSF7-220ENST00000541963 FXR1P51114 621 aaKnown RBP eCLIP6.02□□□□□ -1.45
CPSF7-220ENST00000541963 MLLT6P55198 1093 aaPredicted RBP6.02□□□□□ -1.45
CPSF7-220ENST00000541963 SP2Q02086 613 aa6.02□□□□□ -1.45
CPSF7-220ENST00000541963 STK3Q13188 491 aa6.02□□□□□ -1.45
CPSF7-220ENST00000541963 SHHQ15465 462 aa6.02□□□□□ -1.45
CPSF7-220ENST00000541963 ADRM1Q16186 407 aa6.02□□□□□ -1.45
CPSF7-220ENST00000541963 PTGISQ16647 500 aa6.02□□□□□ -1.45
CPSF7-220ENST00000541963 KIAA0753Q2KHM9 967 aa6.02□□□□□ -1.45
CPSF7-220ENST00000541963 HSDL1Q3SXM5 330 aa6.02□□□□□ -1.45
CPSF7-220ENST00000541963 ARHGAP29Q52LW3 1261 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms