RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 TMEM60Q9H2L4 133 aa10.44□□□□□ -0.74
CHFR-220ENST00000541817 TUFT1Q9NNX1 390 aa10.44□□□□□ -0.74
CHFR-220ENST00000541817 KMT5AQ9NQR1 393 aa10.44□□□□□ -0.74
CHFR-220ENST00000541817 ANKRD6Q9Y2G4 727 aa10.44□□□□□ -0.74
CHFR-220ENST00000541817 TP53BP1Q12888 1972 aaPredicted RBP10.44□□□□□ -0.74
CHFR-220ENST00000541817 E2F8A0AVK6 867 aa10.43□□□□□ -0.74
CHFR-220ENST00000541817 ANO9A1A5B4 782 aa10.43□□□□□ -0.74
CHFR-220ENST00000541817 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.43□□□□□ -0.74
CHFR-220ENST00000541817 CYP3A5P20815 502 aa10.43□□□□□ -0.74
CHFR-220ENST00000541817 SYT1P21579 422 aa10.43□□□□□ -0.74
CHFR-220ENST00000541817 GLDCP23378 1020 aa10.43□□□□□ -0.74
CHFR-220ENST00000541817 RPS6KB1P23443 525 aa10.43□□□□□ -0.74
CHFR-220ENST00000541817 ACADVLP49748 655 aa10.43□□□□□ -0.74
CHFR-220ENST00000541817 USP46P62068 366 aa10.43□□□□□ -0.74
CHFR-220ENST00000541817 PPP2R3AQ06190 1150 aa10.43□□□□□ -0.74
CHFR-220ENST00000541817 STK3Q13188 491 aa10.43□□□□□ -0.74
CHFR-220ENST00000541817 ENOX2Q16206 610 aaKnown RBP10.43□□□□□ -0.74
CHFR-220ENST00000541817 ANO4Q32M45 955 aa10.43□□□□□ -0.74
CHFR-220ENST00000541817 SPATA1Q5VX52 437 aa10.43□□□□□ -0.74
CHFR-220ENST00000541817 SDE2Q6IQ49 451 aa10.43□□□□□ -0.74
CHFR-220ENST00000541817 ETFBKMTQ8IXQ9 262 aa10.43□□□□□ -0.74
CHFR-220ENST00000541817 DAW1Q8N136 415 aa10.43□□□□□ -0.74
CHFR-220ENST00000541817 FSIP1Q8NA03 581 aa10.43□□□□□ -0.74
CHFR-220ENST00000541817 TERB1Q8NA31 727 aa10.43□□□□□ -0.74
CHFR-220ENST00000541817 ENGASEQ8NFI3 743 aa10.43□□□□□ -0.74
CHFR-220ENST00000541817 KIFAP3Q92845 792 aa10.43□□□□□ -0.74
CHFR-220ENST00000541817 MYRFLQ96LU7 910 aa10.43□□□□□ -0.74
CHFR-220ENST00000541817 PPP1R9BQ96SB3 815 aa10.43□□□□□ -0.74
CHFR-220ENST00000541817 NAP1L4Q99733 375 aaKnown RBP10.43□□□□□ -0.74
CHFR-220ENST00000541817 BHMT2Q9H2M3 363 aa10.43□□□□□ -0.74
CHFR-220ENST00000541817 TSPY26PQ9H489 355 aa10.43□□□□□ -0.74
CHFR-220ENST00000541817 RPF1Q9H9Y2 349 aaKnown RBP10.43□□□□□ -0.74
CHFR-220ENST00000541817 HSPBP1Q9NZL4 362 aa10.43□□□□□ -0.74
CHFR-220ENST00000541817 DEC1Q9P2X7 70 aa10.43□□□□□ -0.74
CHFR-220ENST00000541817 GTF3C4Q9UKN8 822 aa10.43□□□□□ -0.74
CHFR-220ENST00000541817 PCDHB1Q9Y5F3 818 aa10.43□□□□□ -0.74
CHFR-220ENST00000541817 UTP20O75691 2785 aaKnown RBP10.43□□□□□ -0.74
CHFR-220ENST00000541817 PRRT4C9JH25 899 aa10.42□□□□□ -0.74
CHFR-220ENST00000541817 PIRO00625 290 aa10.42□□□□□ -0.74
CHFR-220ENST00000541817 CLDN3O15551 220 aa10.42□□□□□ -0.74
CHFR-220ENST00000541817 NEMFO60524 1076 aa10.42□□□□□ -0.74
CHFR-220ENST00000541817 HIP1RO75146 1068 aa10.42□□□□□ -0.74
CHFR-220ENST00000541817 TOM1L1O75674 476 aa10.42□□□□□ -0.74
CHFR-220ENST00000541817 MPOP05164 745 aa10.42□□□□□ -0.74
CHFR-220ENST00000541817 CLTAP09496 248 aa10.42□□□□□ -0.74
CHFR-220ENST00000541817 CR2P20023 1033 aa10.42□□□□□ -0.74
CHFR-220ENST00000541817 PCBP4P57723 403 aaKnown RBP10.42□□□□□ -0.74
CHFR-220ENST00000541817 RPL10AP62906 217 aaKnown RBP10.42□□□□□ -0.74
CHFR-220ENST00000541817 GAD2Q05329 585 aa10.42□□□□□ -0.74
CHFR-220ENST00000541817 FUT11Q495W5 492 aa10.42□□□□□ -0.74
CHFR-220ENST00000541817 BTBD8Q5XKL5 378 aa10.42□□□□□ -0.74
CHFR-220ENST00000541817 ATG14Q6ZNE5 492 aa10.42□□□□□ -0.74
CHFR-220ENST00000541817 TMEM25Q86YD3 366 aa10.42□□□□□ -0.74
CHFR-220ENST00000541817 DHX40Q8IX18 779 aaKnown RBP10.42□□□□□ -0.74
CHFR-220ENST00000541817 EID2Q8N6I1 236 aa10.42□□□□□ -0.74
CHFR-220ENST00000541817 CADM4Q8NFZ8 388 aa10.42□□□□□ -0.74
CHFR-220ENST00000541817 KCNE4Q8WWG9 221 aa10.42□□□□□ -0.74
CHFR-220ENST00000541817 WBP2Q969T9 261 aa10.42□□□□□ -0.74
CHFR-220ENST00000541817 MTMR9Q96QG7 549 aa10.42□□□□□ -0.74
CHFR-220ENST00000541817 GABRG3Q99928 467 aa10.42□□□□□ -0.74
CHFR-220ENST00000541817 MKRN2Q9H000 416 aaKnown RBP10.42□□□□□ -0.74
CHFR-220ENST00000541817 C6orf106Q9H6K1 298 aaPredicted RBP10.42□□□□□ -0.74
CHFR-220ENST00000541817 PLEKHA5Q9HAU0 1116 aa10.42□□□□□ -0.74
CHFR-220ENST00000541817 TM9SF3Q9HD45 589 aa10.42□□□□□ -0.74
CHFR-220ENST00000541817 RRAGDQ9NQL2 400 aaPredicted RBP10.42□□□□□ -0.74
CHFR-220ENST00000541817 ITM2CQ9NQX7 267 aa10.42□□□□□ -0.74
CHFR-220ENST00000541817 TMEM63CQ9P1W3 806 aa10.42□□□□□ -0.74
CHFR-220ENST00000541817 ARHGAP28Q9P2N2 729 aa10.42□□□□□ -0.74
CHFR-220ENST00000541817 DSEQ9UL01 958 aa10.42□□□□□ -0.74
CHFR-220ENST00000541817 PCDHGA1Q9Y5H4 931 aa10.42□□□□□ -0.74
CHFR-220ENST00000541817 MYO9AB2RTY4 2548 aa10.42□□□□□ -0.74
CHFR-220ENST00000541817 NUMA1Q14980 2115 aa10.42□□□□□ -0.74
CHFR-220ENST00000541817 BOD1L1Q8NFC6 3051 aa10.41□□□□□ -0.74
CHFR-220ENST00000541817 SYCE3A1L190 88 aa10.41□□□□□ -0.74
CHFR-220ENST00000541817 ESPNB1AK53 854 aa10.41□□□□□ -0.74
CHFR-220ENST00000541817 TULP1O00294 542 aaPredicted RBP10.41□□□□□ -0.74
CHFR-220ENST00000541817 SLC9A3R1O14745 358 aaPredicted RBP10.41□□□□□ -0.74
CHFR-220ENST00000541817 CPLX1O14810 134 aa10.41□□□□□ -0.74
CHFR-220ENST00000541817 XPOTO43592 962 aaKnown RBP10.41□□□□□ -0.74
CHFR-220ENST00000541817 PCDHGA12O60330 932 aa10.41□□□□□ -0.74
CHFR-220ENST00000541817 HMGB1P09429 215 aaKnown RBP10.41□□□□□ -0.74
CHFR-220ENST00000541817 MBL2P11226 248 aaPredicted RBP10.41□□□□□ -0.74
CHFR-220ENST00000541817 TPMTP51580 245 aa10.41□□□□□ -0.74
CHFR-220ENST00000541817 AFF3P51826 1226 aaKnown RBP10.41□□□□□ -0.74
CHFR-220ENST00000541817 UCNP55089 124 aa10.41□□□□□ -0.74
CHFR-220ENST00000541817 UBE2HP62256 183 aa10.41□□□□□ -0.74
CHFR-220ENST00000541817 SLC7A9P82251 487 aa10.41□□□□□ -0.74
CHFR-220ENST00000541817 TSPY1Q01534 308 aa10.41□□□□□ -0.74
CHFR-220ENST00000541817 SMARCB1Q12824 385 aa10.41□□□□□ -0.74
CHFR-220ENST00000541817 PDIA5Q14554 519 aa10.41□□□□□ -0.74
CHFR-220ENST00000541817 ME3Q16798 604 aa10.41□□□□□ -0.74
CHFR-220ENST00000541817 KCNV2Q8TDN2 545 aa10.41□□□□□ -0.74
CHFR-220ENST00000541817 IGSF8Q969P0 613 aa10.41□□□□□ -0.74
CHFR-220ENST00000541817 RBSNQ9H1K0 784 aa10.41□□□□□ -0.74
CHFR-220ENST00000541817 DNAJC17Q9NVM6 304 aaKnown RBP10.41□□□□□ -0.74
CHFR-220ENST00000541817 USP36Q9P275 1121 aaKnown RBP10.41□□□□□ -0.74
CHFR-220ENST00000541817 VPS37CA5D8V6 355 aaPredicted RBP10.4□□□□□ -0.74
CHFR-220ENST00000541817 ENO4A6NNW6 628 aa10.4□□□□□ -0.74
CHFR-220ENST00000541817 CLCN1P35523 988 aa10.4□□□□□ -0.74
CHFR-220ENST00000541817 CCR10P46092 362 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms