RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 METTL25Q8N6Q8 603 aa7.22□□□□□ -1.25
YBX3-210ENST00000540975 C11orf44Q8N8P7 122 aa7.22□□□□□ -1.25
YBX3-210ENST00000540975 DDB2Q92466 427 aa7.22□□□□□ -1.25
YBX3-210ENST00000540975 ZDHHC12Q96GR4 267 aa7.22□□□□□ -1.25
YBX3-210ENST00000540975 CCDC136Q96JN2 1154 aa7.22□□□□□ -1.25
YBX3-210ENST00000540975 HPSEQ9Y251 543 aa7.22□□□□□ -1.25
YBX3-210ENST00000540975 TCRBV5S1A1TA0A578 114 aa7.21□□□□□ -1.26
YBX3-210ENST00000540975 CAND2O75155 1236 aa7.21□□□□□ -1.26
YBX3-210ENST00000540975 LATS1O95835 1130 aa7.21□□□□□ -1.26
YBX3-210ENST00000540975 CD19P15391 556 aa7.21□□□□□ -1.26
YBX3-210ENST00000540975 ALDH5A1P51649 535 aaPredicted RBP7.21□□□□□ -1.26
YBX3-210ENST00000540975 IFIT5Q13325 482 aaKnown RBP7.21□□□□□ -1.26
YBX3-210ENST00000540975 KIAA1614Q5VZ46 1190 aa7.21□□□□□ -1.26
YBX3-210ENST00000540975 USP49Q70CQ1 688 aa7.21□□□□□ -1.26
YBX3-210ENST00000540975 LIX1LQ8IVB5 337 aa7.21□□□□□ -1.26
YBX3-210ENST00000540975 FAM227BQ96M60 508 aa7.21□□□□□ -1.26
YBX3-210ENST00000540975 GJB4Q9NTQ9 266 aa7.21□□□□□ -1.26
YBX3-210ENST00000540975 FLRT1Q9NZU1 646 aa7.21□□□□□ -1.26
YBX3-210ENST00000540975 VPS51Q9UID3 782 aa7.21□□□□□ -1.26
YBX3-210ENST00000540975 RIMKLBQ9ULI2 386 aa7.21□□□□□ -1.26
YBX3-210ENST00000540975 A0A087WZ62 844 aa7.2□□□□□ -1.26
YBX3-210ENST00000540975 POC1B-GALNT4F8VUJ3 575 aa7.2□□□□□ -1.26
YBX3-210ENST00000540975 SNX2O60749 519 aa7.2□□□□□ -1.26
YBX3-210ENST00000540975 CELA2AP08217 269 aa7.2□□□□□ -1.26
YBX3-210ENST00000540975 TSHRP16473 764 aa7.2□□□□□ -1.26
YBX3-210ENST00000540975 STT3AP46977 705 aa7.2□□□□□ -1.26
YBX3-210ENST00000540975 DIO1P49895 249 aa7.2□□□□□ -1.26
YBX3-210ENST00000540975 RENBPP51606 427 aa7.2□□□□□ -1.26
YBX3-210ENST00000540975 LMAN2Q12907 356 aa7.2□□□□□ -1.26
YBX3-210ENST00000540975 BCDIN3DQ7Z5W3 292 aaKnown RBP7.2□□□□□ -1.26
YBX3-210ENST00000540975 C11orf96Q7Z7L8 435 aa7.2□□□□□ -1.26
YBX3-210ENST00000540975 GALNT4Q8N4A0 578 aa7.2□□□□□ -1.26
YBX3-210ENST00000540975 CCDC33Q8N5R6 958 aa7.2□□□□□ -1.26
YBX3-210ENST00000540975 PNLDC1Q8NA58 520 aaKnown RBP7.2□□□□□ -1.26
YBX3-210ENST00000540975 WDYHV1Q96HA8 205 aa7.2□□□□□ -1.26
YBX3-210ENST00000540975 SELENOOQ9BVL4 669 aa7.2□□□□□ -1.26
YBX3-210ENST00000540975 COLEC11Q9BWP8 271 aa7.2□□□□□ -1.26
YBX3-210ENST00000540975 SLC27A6Q9Y2P4 619 aa7.2□□□□□ -1.26
YBX3-210ENST00000540975 ANO9A1A5B4 782 aa7.19□□□□□ -1.26
YBX3-210ENST00000540975 CLCA1A8K7I4 914 aa7.19□□□□□ -1.26
YBX3-210ENST00000540975 FGFR2P21802 821 aa7.19□□□□□ -1.26
YBX3-210ENST00000540975 FHL3Q13643 280 aa7.19□□□□□ -1.26
YBX3-210ENST00000540975 CLEC9AQ6UXN8 241 aa7.19□□□□□ -1.26
YBX3-210ENST00000540975 CATSPERGQ6ZRH7 1159 aa7.19□□□□□ -1.26
YBX3-210ENST00000540975 ADAMTS18Q8TE60 1221 aa7.19□□□□□ -1.26
YBX3-210ENST00000540975 RITA1Q96K30 269 aa7.19□□□□□ -1.26
YBX3-210ENST00000540975 ASB2Q96Q27 587 aa7.19□□□□□ -1.26
YBX3-210ENST00000540975 HEYLQ9NQ87 328 aaPredicted RBP7.19□□□□□ -1.26
YBX3-210ENST00000540975 ASIC5Q9NY37 505 aa7.19□□□□□ -1.26
YBX3-210ENST00000540975 MYO1AQ9UBC5 1043 aa7.19□□□□□ -1.26
YBX3-210ENST00000540975 STEAP1Q9UHE8 339 aa7.19□□□□□ -1.26
YBX3-210ENST00000540975 APOL1O14791 398 aa7.18□□□□□ -1.26
YBX3-210ENST00000540975 MT-CO3P00414 261 aa7.18□□□□□ -1.26
YBX3-210ENST00000540975 ATICP31939 592 aa7.18□□□□□ -1.26
YBX3-210ENST00000540975 ABCG1P45844 678 aa7.18□□□□□ -1.26
YBX3-210ENST00000540975 COPB1P53618 953 aaKnown RBP7.18□□□□□ -1.26
YBX3-210ENST00000540975 COPAP53621 1224 aa7.18□□□□□ -1.26
YBX3-210ENST00000540975 SERPINA13PQ6UXR4 307 aa7.18□□□□□ -1.26
YBX3-210ENST00000540975 ZNF66Q6ZN08 573 aa7.18□□□□□ -1.26
YBX3-210ENST00000540975 BEND5Q7L4P6 421 aa7.18□□□□□ -1.26
YBX3-210ENST00000540975 LRRC46Q96FV0 321 aa7.18□□□□□ -1.26
YBX3-210ENST00000540975 CCDC17Q96LX7 622 aa7.18□□□□□ -1.26
YBX3-210ENST00000540975 MMS19Q96T76 1030 aa7.18□□□□□ -1.26
YBX3-210ENST00000540975 ZCWPW1Q9H0M4 648 aa7.18□□□□□ -1.26
YBX3-210ENST00000540975 ARNT2Q9HBZ2 717 aa7.18□□□□□ -1.26
YBX3-210ENST00000540975 SNX15Q9NRS6 342 aa7.18□□□□□ -1.26
YBX3-210ENST00000540975 ASAP1Q9ULH1 1129 aa7.18□□□□□ -1.26
YBX3-210ENST00000540975 SETD1BQ9UPS6 1966 aaKnown RBP7.18□□□□□ -1.26
YBX3-210ENST00000540975 A0A1W2PPC4 97 aa7.17□□□□□ -1.26
YBX3-210ENST00000540975 A8MVJ9 347 aa7.17□□□□□ -1.26
YBX3-210ENST00000540975 ADAMTS3O15072 1205 aa7.17□□□□□ -1.26
YBX3-210ENST00000540975 KCNQ3O43525 872 aa7.17□□□□□ -1.26
YBX3-210ENST00000540975 PRC1O43663 620 aa7.17□□□□□ -1.26
YBX3-210ENST00000540975 TMPRSS11DO60235 418 aa7.17□□□□□ -1.26
YBX3-210ENST00000540975 KRT18P05783 430 aaKnown RBP7.17□□□□□ -1.26
YBX3-210ENST00000540975 MYL3P08590 195 aa7.17□□□□□ -1.26
YBX3-210ENST00000540975 CYP2D6P10635 497 aa7.17□□□□□ -1.26
YBX3-210ENST00000540975 MCM5P33992 734 aa7.17□□□□□ -1.26
YBX3-210ENST00000540975 DEUP1Q05D60 604 aa7.17□□□□□ -1.26
YBX3-210ENST00000540975 DENND2CQ68D51 928 aa7.17□□□□□ -1.26
YBX3-210ENST00000540975 DPP9Q86TI2 863 aa7.17□□□□□ -1.26
YBX3-210ENST00000540975 ZC3H10Q96K80 434 aaKnown RBP7.17□□□□□ -1.26
YBX3-210ENST00000540975 SLC25A32Q9H2D1 315 aa7.17□□□□□ -1.26
YBX3-210ENST00000540975 STARD7Q9NQZ5 370 aa7.17□□□□□ -1.26
YBX3-210ENST00000540975 COL15A1P39059 1388 aa7.17□□□□□ -1.26
YBX3-210ENST00000540975 COL3A1P02461 1466 aaPredicted RBP7.17□□□□□ -1.26
YBX3-210ENST00000540975 APEHP13798 732 aaKnown RBP7.16□□□□□ -1.26
YBX3-210ENST00000540975 CLCA4Q14CN2 919 aa7.16□□□□□ -1.26
YBX3-210ENST00000540975 FAM187BQ17R55 369 aa7.16□□□□□ -1.26
YBX3-210ENST00000540975 ARL13BQ3SXY8 428 aa7.16□□□□□ -1.26
YBX3-210ENST00000540975 CEP78Q5JTW2 689 aa7.16□□□□□ -1.26
YBX3-210ENST00000540975 FAM209BQ5JX69 171 aa7.16□□□□□ -1.26
YBX3-210ENST00000540975 C8orf58Q8NAV2 365 aa7.16□□□□□ -1.26
YBX3-210ENST00000540975 FYTTD1Q96QD9 318 aaKnown RBP7.16□□□□□ -1.26
YBX3-210ENST00000540975 SEMA4CQ9C0C4 833 aa7.16□□□□□ -1.26
YBX3-210ENST00000540975 ZBTB26Q9HCK0 441 aa7.16□□□□□ -1.26
YBX3-210ENST00000540975 BTBD19C9JJ37 291 aa7.15□□□□□ -1.26
YBX3-210ENST00000540975 UBE2Q2LH0YL09 131 aa7.15□□□□□ -1.26
YBX3-210ENST00000540975 COQ9O75208 318 aa7.15□□□□□ -1.26
YBX3-210ENST00000540975 TUBB4AP04350 444 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms