RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 RFFLQ8WZ73 363 aa7□□□□□ -1.29
CLTCL1-206ENST00000540896 MYLPFQ96A32 169 aa7□□□□□ -1.29
CLTCL1-206ENST00000540896 C18orf8Q96DM3 657 aa7□□□□□ -1.29
CLTCL1-206ENST00000540896 PCED1BQ96HM7 432 aa7□□□□□ -1.29
CLTCL1-206ENST00000540896 ALS2CR12Q96Q35 445 aa7□□□□□ -1.29
CLTCL1-206ENST00000540896 TMEM209Q96SK2 561 aa7□□□□□ -1.29
CLTCL1-206ENST00000540896 RTP3Q9BQQ7 232 aa7□□□□□ -1.29
CLTCL1-206ENST00000540896 DUSP16Q9BY84 665 aa7□□□□□ -1.29
CLTCL1-206ENST00000540896 B3GNT5Q9BYG0 378 aa7□□□□□ -1.29
CLTCL1-206ENST00000540896 MIS12Q9H081 205 aa7□□□□□ -1.29
CLTCL1-206ENST00000540896 GPAMQ9HCL2 828 aa7□□□□□ -1.29
CLTCL1-206ENST00000540896 MRPL47Q9HD33 250 aaKnown RBP7□□□□□ -1.29
CLTCL1-206ENST00000540896 KRT82Q9NSB4 513 aa7□□□□□ -1.29
CLTCL1-206ENST00000540896 PARVAQ9NVD7 372 aa7□□□□□ -1.29
CLTCL1-206ENST00000540896 ABI2Q9NYB9 513 aaPredicted RBP7□□□□□ -1.29
CLTCL1-206ENST00000540896 MTUS1Q9ULD2 1270 aa7□□□□□ -1.29
CLTCL1-206ENST00000540896 MKL2Q9ULH7 1088 aa7□□□□□ -1.29
CLTCL1-206ENST00000540896 ATXN7L1Q9ULK2 861 aaPredicted RBP7□□□□□ -1.29
CLTCL1-206ENST00000540896 NENFQ9UMX5 172 aa7□□□□□ -1.29
CLTCL1-206ENST00000540896 PCDHB5Q9Y5E4 795 aa7□□□□□ -1.29
CLTCL1-206ENST00000540896 LAMA2P24043 3122 aaKnown RBP7□□□□□ -1.29
CLTCL1-206ENST00000540896 FNDC1Q4ZHG4 1894 aaPredicted RBP7□□□□□ -1.29
CLTCL1-206ENST00000540896 GBF1Q92538 1859 aa7□□□□□ -1.29
CLTCL1-206ENST00000540896 COL4A6Q14031 1691 aa7□□□□□ -1.29
CLTCL1-206ENST00000540896 A0A0A6YYK5 440 aaPredicted RBP6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 LPXNO60711 386 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 FGF18O76093 207 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 SOD2P04179 222 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 CYP1A2P05177 515 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 URODP06132 367 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 OR4Q2P0C623 313 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 LCP1P13796 627 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 NPR3P17342 541 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 MMP8P22894 467 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 RRM1P23921 792 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 CASQ1P31415 396 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 CDH5P33151 784 aaPredicted RBP6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 OR1D2P34982 312 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 CTNNB1P35222 781 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 BMPR1AP36894 532 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 GRIK1P39086 918 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 ACADSBP45954 432 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 GLUD2P49448 558 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 MAP3K7CLP57077 242 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 ETF1P62495 437 aaKnown RBP6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 PDCLQ13371 301 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 MRPL58Q14197 206 aaKnown RBP6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 PSMD5Q16401 504 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 CCDC142Q17RM4 750 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 RTP2Q5QGT7 225 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 KIAA0319Q5VV43 1072 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 OR6B2Q6IFH4 312 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 PMF1Q6P1K2 205 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 DNAJC24Q6P3W2 148 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 FAM171BQ6P995 826 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 DCUN1D2Q6PH85 259 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 FIGNL1Q6PIW4 674 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 SYT10Q6XYQ8 523 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 MON1BQ7L1V2 547 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 SPRED2Q7Z698 418 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 DDX53Q86TM3 631 aaKnown RBP6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 FAM35AQ86V20 835 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 LRRTM3Q86VH5 581 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 TTC30AQ86WT1 665 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 RNF135Q8IUD6 432 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 SCN4BQ8IWT1 228 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 SYCE1Q8N0S2 351 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 VPS52Q8N1B4 723 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 SIX6OS1Q8N1H7 587 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 GOLGA6L1Q8N7Z2 621 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 KLHL23Q8NBE8 558 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 TRIM58Q8NG06 486 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 C1orf216Q8TAB5 229 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 MICAL1Q8TDZ2 1067 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 STK32AQ8WU08 396 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 CLP1Q92989 425 aaKnown RBP6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 ARHGEF26Q96DR7 871 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 SMARCD1Q96GM5 515 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 PGLYRP2Q96PD5 576 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 TGS1Q96RS0 853 aaKnown RBP6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 C17orf80Q9BSJ5 609 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 NUP85Q9BW27 656 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 ZCWPW1Q9H0M4 648 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 CERS4Q9HA82 394 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 LRRC4Q9HBW1 653 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 AVENQ9NQS1 362 aaPredicted RBP6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 MRPL17Q9NRX2 175 aaKnown RBP6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 WDR35Q9P2L0 1181 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 UVRAGQ9P2Y5 699 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 STK39Q9UEW8 545 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 CHORDC1Q9UHD1 332 aaPredicted RBP6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 DNAI1Q9UI46 699 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 SSX2IPQ9Y2D8 614 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 RWDD3Q9Y3V2 267 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 CDY1Q9Y6F8 540 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 SCINQ9Y6U3 715 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 TRIP11Q15643 1979 aa6.99□□□□□ -1.29
CLTCL1-206ENST00000540896 SCN1AP35498 2009 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 CTAGE9A4FU28 777 aa6.98□□□□□ -1.29
CLTCL1-206ENST00000540896 BTNL10A8MVZ5 291 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms