RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 NOSTRINQ8IVI9 506 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 ZBTB8OSQ8IWT0 167 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 ARMC10Q8N2F6 343 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 DAGLBQ8NCG7 672 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 LSM14AQ8ND56 463 aaKnown RBP5.02□□□□□ -1.61
SNHG1-214ENST00000540865 PHC3Q8NDX5 983 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 APPL2Q8NEU8 664 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 TSTD1Q8NFU3 115 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 RPLP0P6Q8NHW5 317 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 OLIG1Q8TAK6 271 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 CEP76Q8TAP6 659 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 GAL3ST3Q96A11 431 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 CHFRQ96EP1 664 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 DYDC2Q96IM9 177 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 FAM46AQ96IP4 442 aaKnown RBP5.02□□□□□ -1.61
SNHG1-214ENST00000540865 P2RY13Q9BPV8 354 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 RNF26Q9BY78 433 aaPredicted RBP5.02□□□□□ -1.61
SNHG1-214ENST00000540865 CEP41Q9BYV8 373 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 POLR3FQ9H1D9 316 aaPredicted RBP5.02□□□□□ -1.61
SNHG1-214ENST00000540865 C2orf40Q9H1Z8 148 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 ATXN3LQ9H3M9 355 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 TASP1Q9H6P5 420 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 FBRSL1Q9HCM7 1045 aaKnown RBP5.02□□□□□ -1.61
SNHG1-214ENST00000540865 CYP4F12Q9HCS2 524 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 HPS4Q9NQG7 708 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 SLC38A7Q9NVC3 462 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 KBTBD4Q9NVX7 518 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 VPS54Q9P1Q0 977 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 GGT7Q9UJ14 662 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 ZMYM5Q9UJ78 669 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 TBX20Q9UMR3 447 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 PCDHA4Q9UN74 947 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 GDAQ9Y2T3 454 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 RAXQ9Y2V3 346 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 SPAG17Q6Q759 2223 aa5.02□□□□□ -1.61
SNHG1-214ENST00000540865 URB1O60287 2271 aaKnown RBP5.02□□□□□ -1.61
SNHG1-214ENST00000540865 ASCC3Q8N3C0 2202 aaKnown RBP5.01□□□□□ -1.61
SNHG1-214ENST00000540865 A0A087WV48 116 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 LRRIQ4A6NIV6 560 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 MARCH6O60337 910 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 EIF4EBP3O60516 100 aaPredicted RBP5.01□□□□□ -1.61
SNHG1-214ENST00000540865 OPHN1O60890 802 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 C1QL1O75973 258 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 VNN2O95498 520 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 HMGB1P09429 215 aaKnown RBP5.01□□□□□ -1.61
SNHG1-214ENST00000540865 XRCC6P12956 609 aaKnown RBP eCLIP5.01□□□□□ -1.61
SNHG1-214ENST00000540865 CD59P13987 128 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 PLA2G2AP14555 144 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 GCFC2P16383 781 aaKnown RBP5.01□□□□□ -1.61
SNHG1-214ENST00000540865 IFNAR1P17181 557 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 BCKDHBP21953 392 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 VAMP1P23763 118 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 GABRR2P28476 465 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 MARCKSP29966 332 aaPredicted RBP5.01□□□□□ -1.61
SNHG1-214ENST00000540865 CDC25CP30307 473 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 P2RY2P41231 377 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 ALDH1A3P47895 512 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 RARRES1P49788 294 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 DUSP4Q13115 394 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 GPR17Q13304 367 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 SLC14A1Q13336 389 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 LRRC14Q15048 493 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 PDGFRLQ15198 375 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 TRIP6Q15654 476 aaKnown RBP5.01□□□□□ -1.61
SNHG1-214ENST00000540865 SGO2Q562F6 1265 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 LCE1DQ5T752 114 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 LMBRD2Q68DH5 695 aaPredicted RBP5.01□□□□□ -1.61
SNHG1-214ENST00000540865 NCAPH2Q6IBW4 605 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 GALNT17Q6IS24 598 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 ALKAL1Q6UXT8 129 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 DYMQ7RTS9 669 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 APBB1IPQ7Z5R6 666 aaPredicted RBP5.01□□□□□ -1.61
SNHG1-214ENST00000540865 RABEPKQ7Z6M1 372 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 DNAJB7Q7Z6W7 309 aaPredicted RBP5.01□□□□□ -1.61
SNHG1-214ENST00000540865 ZNF605Q86T29 641 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 ITIH5Q86UX2 942 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 TPH2Q8IWU9 490 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 BLIDQ8IZY5 108 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 FAM177A1Q8N128 213 aaPredicted RBP5.01□□□□□ -1.61
SNHG1-214ENST00000540865 C2CD4AQ8NCU7 369 aaPredicted RBP5.01□□□□□ -1.61
SNHG1-214ENST00000540865 MCPH1Q8NEM0 835 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 MDM1Q8TC05 714 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 HAS1Q92839 578 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 PSMG2Q969U7 264 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 UTP4Q969X6 686 aaKnown RBP5.01□□□□□ -1.61
SNHG1-214ENST00000540865 CNOT6LQ96LI5 555 aaKnown RBP5.01□□□□□ -1.61
SNHG1-214ENST00000540865 TCEANC2Q96MN5 208 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 CCDC43Q96MW1 224 aaKnown RBP5.01□□□□□ -1.61
SNHG1-214ENST00000540865 TBC1D32Q96NH3 1257 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 GCNAQ96QF7 691 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 NAP1L4Q99733 375 aaKnown RBP5.01□□□□□ -1.61
SNHG1-214ENST00000540865 HSD17B14Q9BPX1 270 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 POLR3CQ9BUI4 534 aaPredicted RBP5.01□□□□□ -1.61
SNHG1-214ENST00000540865 TPSD1Q9BZJ3 242 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 CCDC113Q9H0I3 377 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 TOPORSQ9NS56 1045 aaPredicted RBP5.01□□□□□ -1.61
SNHG1-214ENST00000540865 KRT82Q9NSB4 513 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 MBD1Q9UIS9 605 aaPredicted RBP5.01□□□□□ -1.61
SNHG1-214ENST00000540865 PILRBQ9UKJ0 227 aa5.01□□□□□ -1.61
SNHG1-214ENST00000540865 NAP1L2Q9ULW6 460 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms