RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	OR52E8	Q6IFG1	317 aa		5.92	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	FAM117B	Q6P1L5	589 aa		5.92	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	LVRN	Q6Q4G3	990 aa		5.92	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	C4orf50	Q6ZRC1	276 aa		5.92	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	C1orf186	Q6ZWK4	172 aa		5.92	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	SLC24A5	Q71RS6	500 aa		5.92	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	TRABD2A	Q86V40	505 aa		5.92	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	ANKMY2	Q8IV38	441 aa		5.92	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	GPD1L	Q8N335	351 aa		5.92	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	GALNT15	Q8N3T1	639 aa		5.92	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	PLEKHO2	Q8TD55	490 aa		5.92	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	C10orf82	Q8WW14	230 aa		5.92	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	CPA5	Q8WXQ8	436 aa		5.92	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	GRAMD1A	Q96CP6	724 aa		5.92	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	HAUS1	Q96CS2	278 aa		5.92	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	FGD4	Q96M96	766 aa		5.92	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	KREMEN1	Q96MU8	473 aa		5.92	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	EPAS1	Q99814	870 aa		5.92	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	TRAIP	Q9BWF2	469 aa		5.92	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	DCLK3	Q9C098	648 aa		5.92	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	PCMTD2	Q9NV79	361 aa		5.92	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	WDR35	Q9P2L0	1181 aa		5.92	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	SCOC	Q9UIL1	159 aa		5.92	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	STARD13	Q9Y3M8	1113 aa		5.92	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	LAMB1	P07942	1786 aa		5.92	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	PHIP	Q8WWQ0	1821 aa		5.92	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	TREH	O43280	583 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	ADCY6	O43306	1168 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	TBX10	O75333	385 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	DCTN3	O75935	186 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	NPTXR	O95502	500 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	KRT5	P13647	590 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	ETS2	P15036	469 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	CD58	P19256	250 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	ADRA1D	P25100	572 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	GCA	P28676	217 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	ZBTB16	Q05516	673 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	USP4	Q13107	963 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	ANKS1B	Q7Z6G8	1248 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	SERINC5	Q86VE9	423 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	NPAS4	Q8IUM7	802 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	MFN1	Q8IWA4	741 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	CCDC117	Q8IWD4	279 aa	Predicted RBP	5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	VPS52	Q8N1B4	723 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	UROC1	Q96N76	676 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	SMC6	Q96SB8	1091 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	FIZ1	Q96SL8	496 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	TMEM117	Q9H0C3	514 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	VCX	Q9H320	206 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	DCLRE1B	Q9H816	532 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	C10orf88	Q9H8K7	445 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	RSAD1	Q9HA92	442 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	ARMCX1	Q9P291	453 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	STOML1	Q9UBI4	398 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	HEY2	Q9UBP5	337 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	USP20	Q9Y2K6	914 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	ASB3	Q9Y575	518 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	PDE4DIP	Q5VU43	2346 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	TBKBP1	A7MCY6	615 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	HUS1	O60921	280 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	ATP5H	O75947	161 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	RNF8	O76064	485 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	ALDH2	P05091	517 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	UROD	P06132	367 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	KRT10	P13645	584 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	ACADS	P16219	412 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	PTPN4	P29074	926 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	VHL	P40337	213 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	NPTX2	P47972	431 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	VAMP7	P51809	220 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	NEK3	P51956	506 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	EFTUD2	Q15029	972 aa	Known RBP eCLIP	5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	DUOXA2	Q1HG44	320 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	ATP13A4	Q4VNC1	1196 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	WASHC2D	Q5SRD0	308 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	CLNK	Q7Z7G1	428 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	KBTBD2	Q8IY47	623 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	ENDOV	Q8N8Q3	282 aa	Known RBP	5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	ATL2	Q8NHH9	583 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	TRAPPC12	Q8WVT3	735 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	ZNF75CP	Q92670	426 aa	Predicted RBP	5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	INPP5D	Q92835	1189 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	SEMA4D	Q92854	862 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	FAM136A	Q96C01	138 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	KIF12	Q96FN5	646 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	CYTH2	Q99418	400 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	PI4K2A	Q9BTU6	479 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	MAK16	Q9BXY0	300 aa	Known RBP	5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	DHX33	Q9H6R0	707 aa	Known RBP	5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	OLFML3	Q9NRN5	406 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	HESX1	Q9UBX0	185 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	NOCT	Q9UK39	431 aa	Known RBP	5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	GIT1	Q9Y2X7	761 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	ADGRA3	Q8IWK6	1321 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	POLR2A	P24928	1970 aa	Known RBP	5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	GYG2	O15488	501 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	EOMES	O95936	686 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	KRT4	P19013	534 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	CYP2C18	P33260	490 aa		5.91	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	BPIFB4	P59827	614 aa		5.91	□□□□□ -1.46

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms