RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 RAB41Q5JT25 222 aa17.6■□□□□ 0.41
UBC-208ENST00000540700 ELMSAN1Q6PJG2 1045 aa17.6■□□□□ 0.41
UBC-208ENST00000540700 GET4Q7L5D6 327 aaPredicted RBP17.6■□□□□ 0.41
UBC-208ENST00000540700 TMEM150AQ86TG1 271 aa17.6■□□□□ 0.41
UBC-208ENST00000540700 SPC24Q8NBT2 197 aa17.6■□□□□ 0.41
UBC-208ENST00000540700 IQCDQ96DY2 449 aa17.6■□□□□ 0.41
UBC-208ENST00000540700 TCEAL4Q96EI5 215 aa17.6■□□□□ 0.41
UBC-208ENST00000540700 ABHD10Q9NUJ1 306 aa17.6■□□□□ 0.41
UBC-208ENST00000540700 IL37Q9NZH6 218 aa17.6■□□□□ 0.41
UBC-208ENST00000540700 DLGAP2Q9P1A6 1054 aa17.6■□□□□ 0.41
UBC-208ENST00000540700 ARHGAP20Q9P2F6 1191 aa17.6■□□□□ 0.41
UBC-208ENST00000540700 HESX1Q9UBX0 185 aa17.6■□□□□ 0.41
UBC-208ENST00000540700 NOTCH4Q99466 2003 aa17.6■□□□□ 0.41
UBC-208ENST00000540700 CHD8Q9HCK8 2581 aa17.6■□□□□ 0.41
UBC-208ENST00000540700 KMT2BQ9UMN6 2715 aaPredicted RBP17.59■□□□□ 0.41
UBC-208ENST00000540700 MED7O43513 233 aa17.59■□□□□ 0.41
UBC-208ENST00000540700 RHOP08100 348 aa17.59■□□□□ 0.41
UBC-208ENST00000540700 SETSIPP0DME0 302 aa17.59■□□□□ 0.41
UBC-208ENST00000540700 ANXA13P27216 316 aa17.59■□□□□ 0.41
UBC-208ENST00000540700 CDH5P33151 784 aaPredicted RBP17.59■□□□□ 0.41
UBC-208ENST00000540700 RPL34P49207 117 aaKnown RBP17.59■□□□□ 0.41
UBC-208ENST00000540700 EPHA5P54756 1037 aa17.59■□□□□ 0.41
UBC-208ENST00000540700 GSE1Q14687 1217 aa17.59■□□□□ 0.41
UBC-208ENST00000540700 MEA1Q16626 185 aa17.59■□□□□ 0.41
UBC-208ENST00000540700 PRSS36Q5K4E3 855 aa17.59■□□□□ 0.41
UBC-208ENST00000540700 DENND5BQ6ZUT9 1274 aa17.59■□□□□ 0.41
UBC-208ENST00000540700 BHLHA9Q7RTU4 235 aa17.59■□□□□ 0.41
UBC-208ENST00000540700 NDRG1Q92597 394 aaKnown RBP17.59■□□□□ 0.41
UBC-208ENST00000540700 SYN2Q92777 582 aaPredicted RBP17.59■□□□□ 0.41
UBC-208ENST00000540700 AGPAT1Q99943 283 aa17.59■□□□□ 0.41
UBC-208ENST00000540700 CORO1BQ9BR76 489 aa17.59■□□□□ 0.41
UBC-208ENST00000540700 TTLL2Q9BWV7 592 aa17.59■□□□□ 0.41
UBC-208ENST00000540700 DNAI2Q9GZS0 605 aa17.59■□□□□ 0.41
UBC-208ENST00000540700 LHX5Q9H2C1 402 aa17.59■□□□□ 0.41
UBC-208ENST00000540700 MAGED2Q9UNF1 606 aaPredicted RBP17.59■□□□□ 0.41
UBC-208ENST00000540700 CACNA1IQ9P0X4 2223 aa17.59■□□□□ 0.41
UBC-208ENST00000540700 GREB1Q4ZG55 1949 aa17.59■□□□□ 0.41
UBC-208ENST00000540700 AKR1B15C9JRZ8 316 aaPredicted RBP17.58■□□□□ 0.4
UBC-208ENST00000540700 CYP1A1P04798 512 aaPredicted RBP17.58■□□□□ 0.4
UBC-208ENST00000540700 GLULP15104 373 aa17.58■□□□□ 0.4
UBC-208ENST00000540700 GJA1P17302 382 aa17.58■□□□□ 0.4
UBC-208ENST00000540700 KIF11P52732 1056 aa17.58■□□□□ 0.4
UBC-208ENST00000540700 NOMO3P69849 1222 aa17.58■□□□□ 0.4
UBC-208ENST00000540700 IFRD2Q12894 506 aaPredicted RBP17.58■□□□□ 0.4
UBC-208ENST00000540700 PDCLQ13371 301 aa17.58■□□□□ 0.4
UBC-208ENST00000540700 GAREM2Q75VX8 874 aa17.58■□□□□ 0.4
UBC-208ENST00000540700 ZNF677Q86XU0 584 aa17.58■□□□□ 0.4
UBC-208ENST00000540700 DNAAF5Q86Y56 855 aa17.58■□□□□ 0.4
UBC-208ENST00000540700 NUP93Q8N1F7 819 aa17.58■□□□□ 0.4
UBC-208ENST00000540700 SUMF1Q8NBK3 374 aa17.58■□□□□ 0.4
UBC-208ENST00000540700 ITFG1Q8TB96 612 aa17.58■□□□□ 0.4
UBC-208ENST00000540700 NXPE3Q969Y0 559 aa17.58■□□□□ 0.4
UBC-208ENST00000540700 MYRFLQ96LU7 910 aa17.58■□□□□ 0.4
UBC-208ENST00000540700 ZNF512Q96ME7 567 aaPredicted RBP17.58■□□□□ 0.4
UBC-208ENST00000540700 CPXM1Q96SM3 734 aa17.58■□□□□ 0.4
UBC-208ENST00000540700 UBXN6Q9BZV1 441 aa17.58■□□□□ 0.4
UBC-208ENST00000540700 PNPLA8Q9NP80 782 aa17.58■□□□□ 0.4
UBC-208ENST00000540700 TAS2R14Q9NYV8 317 aa17.58■□□□□ 0.4
UBC-208ENST00000540700 ASB3Q9Y575 518 aa17.58■□□□□ 0.4
UBC-208ENST00000540700 USP3Q9Y6I4 520 aa17.58■□□□□ 0.4
UBC-208ENST00000540700 NUMBLQ9Y6R0 609 aa17.58■□□□□ 0.4
UBC-208ENST00000540700 DOCK6Q96HP0 2047 aa17.57■□□□□ 0.4
UBC-208ENST00000540700 FAM92AA1XBS5 289 aa17.57■□□□□ 0.4
UBC-208ENST00000540700 DDX3XO00571 662 aaKnown RBP eCLIP17.57■□□□□ 0.43e-45■■■□□ 19.1
UBC-208ENST00000540700 XYLBO75191 536 aa17.57■□□□□ 0.4
UBC-208ENST00000540700 F11P03951 625 aa17.57■□□□□ 0.4
UBC-208ENST00000540700 CSH1P0DML2 217 aa17.57■□□□□ 0.4
UBC-208ENST00000540700 CSH2P0DML3 217 aa17.57■□□□□ 0.4
UBC-208ENST00000540700 UNGP13051 313 aaPredicted RBP17.57■□□□□ 0.4
UBC-208ENST00000540700 LAMP2P13473 410 aa17.57■□□□□ 0.4
UBC-208ENST00000540700 KLHL30Q0D2K2 578 aa17.57■□□□□ 0.4
UBC-208ENST00000540700 PTPN20Q4JDL3 420 aa17.57■□□□□ 0.4
UBC-208ENST00000540700 CYP26C1Q6V0L0 522 aa17.57■□□□□ 0.4
UBC-208ENST00000540700 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.57■□□□□ 0.4
UBC-208ENST00000540700 ZNF397Q8NF99 534 aaPredicted RBP17.57■□□□□ 0.4
UBC-208ENST00000540700 PJA1Q8NG27 643 aa17.57■□□□□ 0.4
UBC-208ENST00000540700 OR8K1Q8NGG5 319 aa17.57■□□□□ 0.4
UBC-208ENST00000540700 SHKBP1Q8TBC3 707 aa17.57■□□□□ 0.4
UBC-208ENST00000540700 CLEC4CQ8WTT0 213 aa17.57■□□□□ 0.4
UBC-208ENST00000540700 KCTD13Q8WZ19 329 aa17.57■□□□□ 0.4
UBC-208ENST00000540700 CHP1Q99653 195 aa17.57■□□□□ 0.4
UBC-208ENST00000540700 SLC4A5Q9BY07 1137 aa17.57■□□□□ 0.4
UBC-208ENST00000540700 NCDNQ9UBB6 729 aa17.57■□□□□ 0.4
UBC-208ENST00000540700 E5RJQ4 531 aa17.56■□□□□ 0.4
UBC-208ENST00000540700 MYL4P12829 197 aa17.56■□□□□ 0.4
UBC-208ENST00000540700 CEBPBP17676 345 aa17.56■□□□□ 0.4
UBC-208ENST00000540700 PTPN2P17706 415 aa17.56■□□□□ 0.4
UBC-208ENST00000540700 ADIGQ0VDE8 80 aa17.56■□□□□ 0.4
UBC-208ENST00000540700 TAF10Q12962 218 aa17.56■□□□□ 0.4
UBC-208ENST00000540700 HTR4Q13639 388 aa17.56■□□□□ 0.4
UBC-208ENST00000540700 VEPH1Q14D04 833 aa17.56■□□□□ 0.4
UBC-208ENST00000540700 CLEC16AQ2KHT3 1053 aa17.56■□□□□ 0.4
UBC-208ENST00000540700 PABPC1LQ4VXU2 614 aaKnown RBP17.56■□□□□ 0.4
UBC-208ENST00000540700 C2CD6Q53TS8 623 aa17.56■□□□□ 0.4
UBC-208ENST00000540700 STXBP5Q5T5C0 1151 aa17.56■□□□□ 0.4
UBC-208ENST00000540700 NAA35Q5VZE5 725 aa17.56■□□□□ 0.4
UBC-208ENST00000540700 ITIH5Q86UX2 942 aa17.56■□□□□ 0.4
UBC-208ENST00000540700 MAML2Q8IZL2 1156 aaPredicted RBP17.56■□□□□ 0.4
UBC-208ENST00000540700 SLC30A5Q8TAD4 765 aa17.56■□□□□ 0.4
UBC-208ENST00000540700 CPA5Q8WXQ8 436 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms