RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 CACNA2D1P54289 1103 aa11.16□□□□□ -0.62
ATL3-204ENST00000540699 HADHBP55084 474 aaKnown RBP11.16□□□□□ -0.62
ATL3-204ENST00000540699 DDR2Q16832 855 aa11.16□□□□□ -0.62
ATL3-204ENST00000540699 PABPC1LQ4VXU2 614 aaKnown RBP11.16□□□□□ -0.62
ATL3-204ENST00000540699 ZNF394Q53GI3 561 aa11.16□□□□□ -0.62
ATL3-204ENST00000540699 PRSS36Q5K4E3 855 aa11.16□□□□□ -0.62
ATL3-204ENST00000540699 PPP1R26Q5T8A7 1209 aaPredicted RBP11.16□□□□□ -0.62
ATL3-204ENST00000540699 GRASPQ7Z6J2 395 aaPredicted RBP11.16□□□□□ -0.62
ATL3-204ENST00000540699 ITIH5Q86UX2 942 aa11.16□□□□□ -0.62
ATL3-204ENST00000540699 ELMOD1Q8N336 334 aa11.16□□□□□ -0.62
ATL3-204ENST00000540699 ZMIZ2Q8NF64 920 aa11.16□□□□□ -0.62
ATL3-204ENST00000540699 TRIM58Q8NG06 486 aa11.16□□□□□ -0.62
ATL3-204ENST00000540699 SLC2A14Q8TDB8 520 aa11.16□□□□□ -0.62
ATL3-204ENST00000540699 ZNF592Q92610 1267 aa11.16□□□□□ -0.62
ATL3-204ENST00000540699 EDAQ92838 391 aa11.16□□□□□ -0.62
ATL3-204ENST00000540699 CYFIP2Q96F07 1278 aa11.16□□□□□ -0.62
ATL3-204ENST00000540699 TRMT2BQ96GJ1 504 aaKnown RBP11.16□□□□□ -0.62
ATL3-204ENST00000540699 ZNF512Q96ME7 567 aaPredicted RBP11.16□□□□□ -0.62
ATL3-204ENST00000540699 HEXIM2Q96MH2 286 aaKnown RBP11.16□□□□□ -0.62
ATL3-204ENST00000540699 NOX5Q96PH1 765 aa11.16□□□□□ -0.62
ATL3-204ENST00000540699 PHF7Q9BWX1 381 aaPredicted RBP11.16□□□□□ -0.62
ATL3-204ENST00000540699 THAP2Q9H0W7 228 aa11.16□□□□□ -0.62
ATL3-204ENST00000540699 L2HGDHQ9H9P8 463 aa11.16□□□□□ -0.62
ATL3-204ENST00000540699 PIDD1Q9HB75 910 aa11.16□□□□□ -0.62
ATL3-204ENST00000540699 FAM49BQ9NUQ9 324 aa11.16□□□□□ -0.62
ATL3-204ENST00000540699 HCFC1R1Q9NWW0 138 aa11.16□□□□□ -0.62
ATL3-204ENST00000540699 IL37Q9NZH6 218 aa11.16□□□□□ -0.62
ATL3-204ENST00000540699 USTQ9Y2C2 406 aa11.16□□□□□ -0.62
ATL3-204ENST00000540699 MYO15AQ9UKN7 3530 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 GRID2IPA4D2P6 1211 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 SLC38A8A6NNN8 435 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 F8VP50 259 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 O00370 1275 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 TNFRSF10BO14763 440 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 BUB1O43683 1085 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 MOSPD3O75425 235 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 MTA2O94776 668 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 LSM8O95777 96 aaKnown RBP11.15□□□□□ -0.62
ATL3-204ENST00000540699 CYP1A2P05177 515 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 RHOP08100 348 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 CSH1P0DML2 217 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 CSH2P0DML3 217 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 NPR3P17342 541 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 ABCB4P21439 1286 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 CDR1P51861 262 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 GPC5P78333 572 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 NTHL1P78549 312 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 AMPD2Q01433 879 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 PTP4A2Q12974 167 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 VEPH1Q14D04 833 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 SLC5A9Q2M3M2 681 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 PKDCCQ504Y2 493 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 SGO2Q562F6 1265 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 NAA35Q5VZE5 725 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 PPP1R2P3Q6NXS1 205 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 MON1BQ7L1V2 547 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 PHF13Q86YI8 300 aaPredicted RBP11.15□□□□□ -0.62
ATL3-204ENST00000540699 SCN4BQ8IWT1 228 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 HS6ST3Q8IZP7 471 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 LRRC57Q8N9N7 239 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 TPCN2Q8NHX9 752 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 CTNNBL1Q8WYA6 563 aaPredicted RBP11.15□□□□□ -0.62
ATL3-204ENST00000540699 NAPGQ99747 312 aaPredicted RBP11.15□□□□□ -0.62
ATL3-204ENST00000540699 SMOQ99835 787 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 TTLL2Q9BWV7 592 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 DUSP16Q9BY84 665 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 IL21Q9HBE4 155 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 ZNF334Q9HCZ1 680 aaPredicted RBP11.15□□□□□ -0.62
ATL3-204ENST00000540699 PNPLA8Q9NP80 782 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 DMAP1Q9NPF5 467 aaPredicted RBP11.15□□□□□ -0.62
ATL3-204ENST00000540699 ASAH2Q9NR71 780 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 KRT82Q9NSB4 513 aa11.15□□□□□ -0.62
ATL3-204ENST00000540699 DMDP11532 3685 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 FAM92AA1XBS5 289 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 CTAGE9A4FU28 777 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 HHLA1C9JL84 531 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 NRG2O14511 850 aaPredicted RBP11.14□□□□□ -0.63
ATL3-204ENST00000540699 ZNF197O14709 1029 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 PALMO75781 387 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 AP1G2O75843 785 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 BEST1O76090 585 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 FGF19O95750 216 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 FAM200BP0CF97 657 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 FSHRP23945 695 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 GRIK1P39086 918 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 CCR2P41597 374 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 C1QBPQ07021 282 aaKnown RBP11.14□□□□□ -0.63
ATL3-204ENST00000540699 STILQ15468 1287 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 CNGA2Q16280 664 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 SDHAF4Q5VUM1 108 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 PAPD7Q5XG87 772 aaKnown RBP11.14□□□□□ -0.63
ATL3-204ENST00000540699 LCLAT1Q6UWP7 414 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 CLEC20AQ6ZU45 233 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 BMP8AQ7Z5Y6 402 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 SLFN11Q7Z7L1 901 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 TTC30AQ86WT1 665 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 PASD1Q8IV76 773 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 RHOT2Q8IXI1 618 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 MCOLN2Q8IZK6 566 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 WDTC1Q8N5D0 677 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms