RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 MAN2A1Q16706 1144 aa15.88■□□□□ 0.13
UBE3B-212ENST00000540230 PKDCCQ504Y2 493 aa15.88■□□□□ 0.13
UBE3B-212ENST00000540230 RAB41Q5JT25 222 aa15.88■□□□□ 0.13
UBE3B-212ENST00000540230 CCDC186Q7Z3E2 898 aa15.88■□□□□ 0.13
UBE3B-212ENST00000540230 C1orf210Q8IVY1 113 aa15.88■□□□□ 0.13
UBE3B-212ENST00000540230 NDRG1Q92597 394 aaKnown RBP15.88■□□□□ 0.13
UBE3B-212ENST00000540230 MSANTD3Q96H12 275 aa15.88■□□□□ 0.13
UBE3B-212ENST00000540230 ECT2Q9H8V3 914 aa15.88■□□□□ 0.13
UBE3B-212ENST00000540230 LMAN1LQ9HAT1 526 aa15.88■□□□□ 0.13
UBE3B-212ENST00000540230 FBRSL1Q9HCM7 1045 aaKnown RBP15.88■□□□□ 0.13
UBE3B-212ENST00000540230 UBE2TQ9NPD8 197 aaPredicted RBP15.88■□□□□ 0.13
UBE3B-212ENST00000540230 CYLDQ9NQC7 956 aa15.88■□□□□ 0.13
UBE3B-212ENST00000540230 MYOFQ9NZM1 2061 aa15.87■□□□□ 0.13
UBE3B-212ENST00000540230 MBD3O95983 291 aa15.87■□□□□ 0.13
UBE3B-212ENST00000540230 PON1P27169 355 aa15.87■□□□□ 0.13
UBE3B-212ENST00000540230 GJA4P35212 333 aa15.87■□□□□ 0.13
UBE3B-212ENST00000540230 RPS9P46781 194 aaKnown RBP15.87■□□□□ 0.13
UBE3B-212ENST00000540230 BST2Q10589 180 aaKnown RBP15.87■□□□□ 0.13
UBE3B-212ENST00000540230 GBP6Q6ZN66 633 aa15.87■□□□□ 0.13
UBE3B-212ENST00000540230 Q6ZS52 159 aa15.87■□□□□ 0.13
UBE3B-212ENST00000540230 BHLHA9Q7RTU4 235 aa15.87■□□□□ 0.13
UBE3B-212ENST00000540230 ATOH1Q92858 354 aaPredicted RBP15.87■□□□□ 0.13
UBE3B-212ENST00000540230 TUBGCP2Q9BSJ2 902 aa15.87■□□□□ 0.13
UBE3B-212ENST00000540230 SIX2Q9NPC8 291 aa15.87■□□□□ 0.13
UBE3B-212ENST00000540230 ACP6Q9NPH0 428 aa15.87■□□□□ 0.13
UBE3B-212ENST00000540230 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.87■□□□□ 0.13
UBE3B-212ENST00000540230 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.87■□□□□ 0.13
UBE3B-212ENST00000540230 CNTN6Q9UQ52 1028 aa15.87■□□□□ 0.13
UBE3B-212ENST00000540230 NFE2L3Q9Y4A8 694 aa15.87■□□□□ 0.13
UBE3B-212ENST00000540230 BECN2A8MW95 431 aa15.86■□□□□ 0.13
UBE3B-212ENST00000540230 KCNJ18B7U540 433 aa15.86■□□□□ 0.13
UBE3B-212ENST00000540230 XPO1O14980 1071 aaKnown RBP15.86■□□□□ 0.13
UBE3B-212ENST00000540230 GABBR2O75899 941 aa15.86■□□□□ 0.13
UBE3B-212ENST00000540230 IRF1P10914 325 aa15.86■□□□□ 0.13
UBE3B-212ENST00000540230 RARGP13631 454 aa15.86■□□□□ 0.13
UBE3B-212ENST00000540230 PRKCSHP14314 528 aaPredicted RBP15.86■□□□□ 0.13
UBE3B-212ENST00000540230 TKTL1P51854 596 aa15.86■□□□□ 0.13
UBE3B-212ENST00000540230 MTAPQ13126 283 aa15.86■□□□□ 0.13
UBE3B-212ENST00000540230 KCNJ12Q14500 433 aa15.86■□□□□ 0.13
UBE3B-212ENST00000540230 EXOC3L4Q17RC7 722 aa15.86■□□□□ 0.13
UBE3B-212ENST00000540230 GAB4Q2WGN9 574 aa15.86■□□□□ 0.13
UBE3B-212ENST00000540230 CCDC183Q5T5S1 534 aa15.86■□□□□ 0.13
UBE3B-212ENST00000540230 LCLAT1Q6UWP7 414 aa15.86■□□□□ 0.13
UBE3B-212ENST00000540230 ENOX1Q8TC92 643 aaKnown RBP15.86■□□□□ 0.13
UBE3B-212ENST00000540230 ULBP1Q9BZM6 244 aa15.86■□□□□ 0.13
UBE3B-212ENST00000540230 UBXN6Q9BZV1 441 aa15.86■□□□□ 0.13
UBE3B-212ENST00000540230 CHRDQ9H2X0 955 aa15.86■□□□□ 0.13
UBE3B-212ENST00000540230 NDST4Q9H3R1 872 aa15.86■□□□□ 0.13
UBE3B-212ENST00000540230 SPATA6Q9NWH7 488 aaPredicted RBP15.86■□□□□ 0.13
UBE3B-212ENST00000540230 HESX1Q9UBX0 185 aa15.86■□□□□ 0.13
UBE3B-212ENST00000540230 NAGPAQ9UK23 515 aa15.86■□□□□ 0.13
UBE3B-212ENST00000540230 ATG2BQ96BY7 2078 aa15.86■□□□□ 0.13
UBE3B-212ENST00000540230 GTPBP10A4D1E9 387 aaKnown RBP15.85■□□□□ 0.13
UBE3B-212ENST00000540230 NCAM2O15394 837 aa15.85■□□□□ 0.13
UBE3B-212ENST00000540230 KRT5P13647 590 aa15.85■□□□□ 0.13
UBE3B-212ENST00000540230 PLA2G4AP47712 749 aa15.85■□□□□ 0.13
UBE3B-212ENST00000540230 CCINQ13939 588 aa15.85■□□□□ 0.13
UBE3B-212ENST00000540230 ARHGAP44Q17R89 818 aa15.85■□□□□ 0.13
UBE3B-212ENST00000540230 VWA3BQ502W6 1294 aa15.85■□□□□ 0.13
UBE3B-212ENST00000540230 CT47A1Q5JQC4 288 aaPredicted RBP15.85■□□□□ 0.13
UBE3B-212ENST00000540230 FSTL4Q6MZW2 842 aa15.85■□□□□ 0.13
UBE3B-212ENST00000540230 DPY19L2P1Q6NXN4 242 aa15.85■□□□□ 0.13
UBE3B-212ENST00000540230 FAM114A1Q8IWE2 563 aa15.85■□□□□ 0.13
UBE3B-212ENST00000540230 CPA6Q8N4T0 437 aa15.85■□□□□ 0.13
UBE3B-212ENST00000540230 ATP2A3Q93084 1043 aa15.85■□□□□ 0.13
UBE3B-212ENST00000540230 KLF16Q9BXK1 252 aaPredicted RBP15.85■□□□□ 0.13
UBE3B-212ENST00000540230 APEX2Q9UBZ4 518 aa15.85■□□□□ 0.13
UBE3B-212ENST00000540230 KIAA1257Q9ULG3 409 aa15.85■□□□□ 0.13
UBE3B-212ENST00000540230 M0QYV0 167 aa15.84■□□□□ 0.13
UBE3B-212ENST00000540230 PIK3R2O00459 728 aa15.84■□□□□ 0.13
UBE3B-212ENST00000540230 GREM1O60565 184 aa15.84■□□□□ 0.13
UBE3B-212ENST00000540230 CYP17A1P05093 508 aa15.84■□□□□ 0.13
UBE3B-212ENST00000540230 MAGEA9P43362 315 aa15.84■□□□□ 0.13
UBE3B-212ENST00000540230 RGS7P49802 495 aa15.84■□□□□ 0.13
UBE3B-212ENST00000540230 ADIGQ0VDE8 80 aa15.84■□□□□ 0.13
UBE3B-212ENST00000540230 KCNMA1Q12791 1236 aa15.84■□□□□ 0.13
UBE3B-212ENST00000540230 CNGA2Q16280 664 aa15.84■□□□□ 0.13
UBE3B-212ENST00000540230 TCP11X2Q5H9J9 407 aa15.84■□□□□ 0.13
UBE3B-212ENST00000540230 TMEM196Q5HYL7 178 aa15.84■□□□□ 0.13
UBE3B-212ENST00000540230 PMF1Q6P1K2 205 aa15.84■□□□□ 0.13
UBE3B-212ENST00000540230 C1orf228Q6PIY5 440 aa15.84■□□□□ 0.13
UBE3B-212ENST00000540230 TSSK4Q6SA08 328 aa15.84■□□□□ 0.13
UBE3B-212ENST00000540230 SASS6Q6UVJ0 657 aa15.84■□□□□ 0.13
UBE3B-212ENST00000540230 BBS7Q8IWZ6 715 aa15.84■□□□□ 0.13
UBE3B-212ENST00000540230 ADGRG2Q8IZP9 1017 aa15.84■□□□□ 0.13
UBE3B-212ENST00000540230 SLC35F5Q8WV83 523 aa15.84■□□□□ 0.13
UBE3B-212ENST00000540230 EZH1Q92800 747 aaPredicted RBP15.84■□□□□ 0.13
UBE3B-212ENST00000540230 SECISBP2LQ93073 1101 aaKnown RBP15.84■□□□□ 0.13
UBE3B-212ENST00000540230 NACA2Q9H009 215 aa15.84■□□□□ 0.13
UBE3B-212ENST00000540230 C2orf42Q9NWW7 574 aa15.84■□□□□ 0.13
UBE3B-212ENST00000540230 TAB2Q9NYJ8 693 aa15.84■□□□□ 0.13
UBE3B-212ENST00000540230 E2F8A0AVK6 867 aa15.84■□□□□ 0.13
UBE3B-212ENST00000540230 NFATC1O95644 943 aa15.84■□□□□ 0.13
UBE3B-212ENST00000540230 EGFP01133 1207 aa15.84■□□□□ 0.13
UBE3B-212ENST00000540230 SP9P0CG40 484 aa15.84■□□□□ 0.13
UBE3B-212ENST00000540230 PNMA6AP0CW24 399 aaPredicted RBP15.84■□□□□ 0.13
UBE3B-212ENST00000540230 SETSIPP0DME0 302 aa15.84■□□□□ 0.13
UBE3B-212ENST00000540230 HOXC13P31276 330 aa15.84■□□□□ 0.13
UBE3B-212ENST00000540230 ATP5C1P36542 298 aaKnown RBP15.84■□□□□ 0.13
UBE3B-212ENST00000540230 GALK1P51570 392 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms