RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 RFFLQ8WZ73 363 aa6.28□□□□□ -1.4
PTPRD-214ENST00000540109 EME1Q96AY2 570 aa6.28□□□□□ -1.4
PTPRD-214ENST00000540109 NSL1Q96IY1 281 aa6.28□□□□□ -1.4
PTPRD-214ENST00000540109 UBXN6Q9BZV1 441 aa6.28□□□□□ -1.4
PTPRD-214ENST00000540109 RNPEPL1Q9HAU8 725 aa6.28□□□□□ -1.4
PTPRD-214ENST00000540109 TTC7AQ9ULT0 858 aaPredicted RBP6.28□□□□□ -1.4
PTPRD-214ENST00000540109 LOC285556D6RIA3 1793 aa6.27□□□□□ -1.4
PTPRD-214ENST00000540109 GSNP06396 782 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 VAV1P15498 845 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 PSMA4P25789 261 aaKnown RBP6.27□□□□□ -1.41
PTPRD-214ENST00000540109 CHKAP35790 457 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 RECQLP46063 649 aaPredicted RBP6.27□□□□□ -1.41
PTPRD-214ENST00000540109 MTMR2Q13614 643 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 RPS6KA2Q15349 733 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 TOMM20Q15388 145 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 BRDTQ58F21 947 aaPredicted RBP6.27□□□□□ -1.41
PTPRD-214ENST00000540109 TMEM53Q6P2H8 277 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 ALKBH5Q6P6C2 394 aaKnown RBP6.27□□□□□ -1.41
PTPRD-214ENST00000540109 POTEHQ6S545 545 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 MTHFD1LQ6UB35 978 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 ACAD11Q709F0 780 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 MARK2Q7KZI7 788 aaKnown RBP6.27□□□□□ -1.41
PTPRD-214ENST00000540109 MIGA2Q7L4E1 593 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 P2RX7Q99572 595 aaKnown RBP6.27□□□□□ -1.41
PTPRD-214ENST00000540109 YIPF2Q9BWQ6 316 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 MAGEE1Q9HCI5 957 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 PLK2Q9NYY3 685 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 DCDC2Q9UHG0 476 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 AP3M1Q9Y2T2 418 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 FIS1Q9Y3D6 152 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 M0R3G1 203 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 NFKBIEO00221 500 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 SPTLC1O15269 473 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 PHF2O75151 1096 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 CNOT3O75175 753 aaKnown RBP6.27□□□□□ -1.41
PTPRD-214ENST00000540109 NR3C2P08235 984 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 GZMAP12544 262 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 ITGB5P18084 799 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 PTPRAP18433 802 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 STXBP2Q15833 593 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 MEI1Q5TIA1 1274 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 BSPRYQ5W0U4 402 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 RWDD4Q6NW29 188 aaKnown RBP6.27□□□□□ -1.41
PTPRD-214ENST00000540109 CATSPERGQ6ZRH7 1159 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 FKBP9P1Q75LS8 142 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 HAUS6Q7Z4H7 955 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 ACTRT1Q8TDG2 376 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 AGBL1Q96MI9 1066 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 PRPF18Q99633 342 aaKnown RBP6.27□□□□□ -1.41
PTPRD-214ENST00000540109 CYP39A1Q9NYL5 469 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 PTTG2Q9NZH5 202 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 NENFQ9UMX5 172 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 A0A087WXM4 84 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 TMEM191CA6NGB0 347 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 ANGPT2O15123 496 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 H2AFYO75367 372 aaKnown RBP6.27□□□□□ -1.41
PTPRD-214ENST00000540109 S100A9P06702 114 aaKnown RBP6.27□□□□□ -1.41
PTPRD-214ENST00000540109 TMEM191BP0C7N4 346 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 TGFB3P10600 412 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 IFNA8P32881 189 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 KLK7P49862 253 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 VAMP7P51809 220 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 SNAP25P60880 206 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 ABCE1P61221 599 aaKnown RBP6.27□□□□□ -1.41
PTPRD-214ENST00000540109 SGO2Q562F6 1265 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 XKR9Q5GH70 373 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 PERM1Q5SV97 790 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 LBX2Q6XYB7 198 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 SLC25A41Q8N5S1 370 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 LACRTQ9GZZ8 138 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 NRBP2Q9NSY0 501 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 RRN3Q9NYV6 651 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 FANCGO15287 622 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 RAD51CO43502 376 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 ARL4CP56559 192 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 ZNF394Q53GI3 561 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 KIAA1755Q5JYT7 1200 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 C11orf63Q6NUN7 778 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 CLVS1Q8IUQ0 354 aaPredicted RBP6.27□□□□□ -1.41
PTPRD-214ENST00000540109 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.27□□□□□ -1.41
PTPRD-214ENST00000540109 ZNF786Q8N393 782 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 APPL2Q8NEU8 664 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 PYROXD1Q8WU10 500 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 CYGBQ8WWM9 190 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 GJA10Q969M2 543 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 SPOCK3Q9BQ16 436 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 TRIM51Q9BSJ1 452 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 RAVER2Q9HCJ3 691 aaKnown RBP6.27□□□□□ -1.41
PTPRD-214ENST00000540109 WDR35Q9P2L0 1181 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 GABBR1Q9UBS5 961 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 NAGPAQ9UK23 515 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 IREB2P48200 963 aaKnown RBP6.27□□□□□ -1.41
PTPRD-214ENST00000540109 MXI1P50539 228 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 SCRN3Q0VDG4 424 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 ZYXQ15942 572 aaKnown RBP6.27□□□□□ -1.41
PTPRD-214ENST00000540109 IRF2BP2Q7Z5L9 587 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 PLD3Q8IV08 490 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 DCLK2Q8N568 766 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 WNT8AQ9H1J5 351 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 FAM124BQ9H5Z6 455 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms