RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 L2HGDHQ9H9P8 463 aa18.1■□□□□ 0.49
CLN6-202ENST00000538696 ZNF334Q9HCZ1 680 aaPredicted RBP18.1■□□□□ 0.49
CLN6-202ENST00000538696 CNOT8Q9UFF9 292 aaKnown RBP18.1■□□□□ 0.49
CLN6-202ENST00000538696 ASB3Q9Y575 518 aa18.1■□□□□ 0.49
CLN6-202ENST00000538696 E5RJQ4 531 aa18.09■□□□□ 0.49
CLN6-202ENST00000538696 XYLBO75191 536 aa18.09■□□□□ 0.49
CLN6-202ENST00000538696 FTCDO95954 541 aa18.09■□□□□ 0.49
CLN6-202ENST00000538696 ERBB2P04626 1255 aa18.09■□□□□ 0.49
CLN6-202ENST00000538696 AMPD2Q01433 879 aa18.09■□□□□ 0.49
CLN6-202ENST00000538696 IFRD2Q12894 506 aaPredicted RBP18.09■□□□□ 0.49
CLN6-202ENST00000538696 PTP4A2Q12974 167 aa18.09■□□□□ 0.49
CLN6-202ENST00000538696 C2CD6Q53TS8 623 aa18.09■□□□□ 0.49
CLN6-202ENST00000538696 TMC5Q6UXY8 1006 aa18.09■□□□□ 0.49
CLN6-202ENST00000538696 MMS22LQ6ZRQ5 1243 aa18.09■□□□□ 0.49
CLN6-202ENST00000538696 EP400NLQ6ZTU2 488 aa18.09■□□□□ 0.49
CLN6-202ENST00000538696 DNAJB7Q7Z6W7 309 aaPredicted RBP18.09■□□□□ 0.49
CLN6-202ENST00000538696 PHLDB2Q86SQ0 1253 aa18.09■□□□□ 0.49
CLN6-202ENST00000538696 ITIH5Q86UX2 942 aa18.09■□□□□ 0.49
CLN6-202ENST00000538696 TMC8Q8IU68 726 aa18.09■□□□□ 0.49
CLN6-202ENST00000538696 HS6ST3Q8IZP7 471 aa18.09■□□□□ 0.49
CLN6-202ENST00000538696 ELMOD1Q8N336 334 aa18.09■□□□□ 0.49
CLN6-202ENST00000538696 LRRC57Q8N9N7 239 aa18.09■□□□□ 0.49
CLN6-202ENST00000538696 PPM1EQ8WY54 764 aa18.09■□□□□ 0.49
CLN6-202ENST00000538696 TTLL2Q9BWV7 592 aa18.09■□□□□ 0.49
CLN6-202ENST00000538696 LRRC3Q9BY71 257 aa18.09■□□□□ 0.49
CLN6-202ENST00000538696 GOLPH3Q9H4A6 298 aa18.09■□□□□ 0.49
CLN6-202ENST00000538696 LRRC4Q9HBW1 653 aa18.09■□□□□ 0.49
CLN6-202ENST00000538696 CYLDQ9NQC7 956 aa18.09■□□□□ 0.49
CLN6-202ENST00000538696 ST7Q9NRC1 585 aa18.09■□□□□ 0.49
CLN6-202ENST00000538696 HCFC1R1Q9NWW0 138 aa18.09■□□□□ 0.49
CLN6-202ENST00000538696 IL37Q9NZH6 218 aa18.09■□□□□ 0.49
CLN6-202ENST00000538696 CTTNBP2NLQ9P2B4 639 aa18.09■□□□□ 0.49
CLN6-202ENST00000538696 MAGED2Q9UNF1 606 aaPredicted RBP18.09■□□□□ 0.49
CLN6-202ENST00000538696 REV3LO60673 3130 aa18.09■□□□□ 0.49
CLN6-202ENST00000538696 RTN3O95197 1032 aaPredicted RBP18.08■□□□□ 0.49
CLN6-202ENST00000538696 LCP1P13796 627 aa18.08■□□□□ 0.49
CLN6-202ENST00000538696 HOXB8P17481 243 aaPredicted RBP18.08■□□□□ 0.49
CLN6-202ENST00000538696 ACADSBP45954 432 aa18.08■□□□□ 0.49
CLN6-202ENST00000538696 TKTL1P51854 596 aa18.08■□□□□ 0.49
CLN6-202ENST00000538696 TMEM110Q86TL2 294 aa18.08■□□□□ 0.49
CLN6-202ENST00000538696 RHOT2Q8IXI1 618 aa18.08■□□□□ 0.49
CLN6-202ENST00000538696 IPO4Q8TEX9 1081 aaKnown RBP18.08■□□□□ 0.49
CLN6-202ENST00000538696 SMG7Q92540 1137 aaKnown RBP18.08■□□□□ 0.49
CLN6-202ENST00000538696 TRIM11Q96F44 468 aa18.08■□□□□ 0.49
CLN6-202ENST00000538696 TRMT2BQ96GJ1 504 aaKnown RBP18.08■□□□□ 0.49
CLN6-202ENST00000538696 MSLNLQ96KJ4 702 aa18.08■□□□□ 0.49
CLN6-202ENST00000538696 MYRFLQ96LU7 910 aa18.08■□□□□ 0.49
CLN6-202ENST00000538696 ZNF512Q96ME7 567 aaPredicted RBP18.08■□□□□ 0.49
CLN6-202ENST00000538696 NUP85Q9BW27 656 aa18.08■□□□□ 0.49
CLN6-202ENST00000538696 ULBP1Q9BZM6 244 aa18.08■□□□□ 0.49
CLN6-202ENST00000538696 AVENQ9NQS1 362 aaPredicted RBP18.08■□□□□ 0.49
CLN6-202ENST00000538696 COMMD8Q9NX08 183 aa18.08■□□□□ 0.49
CLN6-202ENST00000538696 ADAM22Q9P0K1 906 aa18.08■□□□□ 0.49
CLN6-202ENST00000538696 DNMT3BQ9UBC3 853 aaKnown RBP18.08■□□□□ 0.49
CLN6-202ENST00000538696 MRFAP1Q9Y605 127 aa18.08■□□□□ 0.49
CLN6-202ENST00000538696 USP3Q9Y6I4 520 aa18.08■□□□□ 0.49
CLN6-202ENST00000538696 FAM92AA1XBS5 289 aa18.07■□□□□ 0.48
CLN6-202ENST00000538696 BUB1BO60566 1050 aaPredicted RBP18.07■□□□□ 0.48
CLN6-202ENST00000538696 MTA2O94776 668 aa18.07■□□□□ 0.48
CLN6-202ENST00000538696 MYBL1P10243 752 aa18.07■□□□□ 0.48
CLN6-202ENST00000538696 MMP8P22894 467 aa18.07■□□□□ 0.48
CLN6-202ENST00000538696 RRM1P23921 792 aa18.07■□□□□ 0.48
CLN6-202ENST00000538696 YWHAQP27348 245 aa18.07■□□□□ 0.48
CLN6-202ENST00000538696 HADHBP55084 474 aaKnown RBP18.07■□□□□ 0.48
CLN6-202ENST00000538696 C1QBPQ07021 282 aaKnown RBP18.07■□□□□ 0.48
CLN6-202ENST00000538696 PAPD7Q5XG87 772 aaKnown RBP18.07■□□□□ 0.48
CLN6-202ENST00000538696 PPP1R2P3Q6NXS1 205 aa18.07■□□□□ 0.48
CLN6-202ENST00000538696 BHLHA9Q7RTU4 235 aa18.07■□□□□ 0.48
CLN6-202ENST00000538696 SLFN11Q7Z7L1 901 aa18.07■□□□□ 0.48
CLN6-202ENST00000538696 GPR149Q86SP6 731 aa18.07■□□□□ 0.48
CLN6-202ENST00000538696 ERICH1Q86X53 443 aa18.07■□□□□ 0.48
CLN6-202ENST00000538696 SIX6OS1Q8N1H7 587 aa18.07■□□□□ 0.48
CLN6-202ENST00000538696 ZNF564Q8TBZ8 553 aaPredicted RBP18.07■□□□□ 0.48
CLN6-202ENST00000538696 CLEC4CQ8WTT0 213 aa18.07■□□□□ 0.48
CLN6-202ENST00000538696 CORO1BQ9BR76 489 aa18.07■□□□□ 0.48
CLN6-202ENST00000538696 S1PR5Q9H228 398 aa18.07■□□□□ 0.48
CLN6-202ENST00000538696 IL21Q9HBE4 155 aa18.07■□□□□ 0.48
CLN6-202ENST00000538696 CDH22Q9UJ99 828 aa18.07■□□□□ 0.48
CLN6-202ENST00000538696 JRKLQ9Y4A0 524 aa18.07■□□□□ 0.48
CLN6-202ENST00000538696 NRG2O14511 850 aaPredicted RBP18.06■□□□□ 0.48
CLN6-202ENST00000538696 PAPSS1O43252 624 aaPredicted RBP18.06■□□□□ 0.48
CLN6-202ENST00000538696 TADA3O75528 432 aa18.06■□□□□ 0.48
CLN6-202ENST00000538696 USP17L7P0C7H9 530 aa18.06■□□□□ 0.48
CLN6-202ENST00000538696 GABRB2P47870 512 aa18.06■□□□□ 0.48
CLN6-202ENST00000538696 EPHA5P54756 1037 aa18.06■□□□□ 0.48
CLN6-202ENST00000538696 NTHL1P78549 312 aa18.06■□□□□ 0.48
CLN6-202ENST00000538696 TAF10Q12962 218 aa18.06■□□□□ 0.48
CLN6-202ENST00000538696 SKIV2LQ15477 1246 aaKnown RBP18.06■□□□□ 0.48
CLN6-202ENST00000538696 TAF12Q16514 161 aa18.06■□□□□ 0.48
CLN6-202ENST00000538696 CYP4A22Q5TCH4 519 aa18.06■□□□□ 0.48
CLN6-202ENST00000538696 FAM183BPQ6ZVS7 135 aa18.06■□□□□ 0.48
CLN6-202ENST00000538696 GRASPQ7Z6J2 395 aaPredicted RBP18.06■□□□□ 0.48
CLN6-202ENST00000538696 SCML4Q8N228 414 aa18.06■□□□□ 0.48
CLN6-202ENST00000538696 NDRG1Q92597 394 aaKnown RBP18.06■□□□□ 0.48
CLN6-202ENST00000538696 FBXO32Q969P5 355 aa18.06■□□□□ 0.48
CLN6-202ENST00000538696 PIWIL1Q96J94 861 aaKnown RBP18.06■□□□□ 0.48
CLN6-202ENST00000538696 TLR10Q9BXR5 811 aa18.06■□□□□ 0.48
CLN6-202ENST00000538696 MIS12Q9H081 205 aa18.06■□□□□ 0.48
CLN6-202ENST00000538696 FBXO44Q9H4M3 255 aa18.06■□□□□ 0.48
CLN6-202ENST00000538696 SYNCQ9H7C4 482 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms